Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|084800
Gene name
Locationscaffold_5:1637545..1639217
Strand-
Gene length (bp)1672
Transcript length (bp)1281
Coding sequence length (bp)1281
Protein length (aa) 427

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|084800
MQLSLASVILSVLLACQANPAPRCKAPSHSASDKYLGDASGHVIGATYFLTDEPTGNFIVGSDIGSDGLLTLRRA
VNAGGVGAHGLHDLGPDPLFSQGCIDLSAEKQVLVTVNAGSNTVAAFKIDPTDPTNLKMLGKPVDSHGDFPASVA
LNKAADKACIINSGTHDGVSCYTLDAKKGLYEIPNTVRPVGLNQTTPPTGTSGTLSNIIFSEDETKLYVAVKGTD
PAINVDTHPGFFAVWDILHDGSLSEKYTRIPVPEGGKQPFAMTPIPNENAILGADGAAGFYVWDLETIDQGIPGP
RSSVTPVEGQSSVCWSRYSPCTGNFYVVDGVISNITQVTLDENLKPTKVMNFPQDIFDATIDFEIVPINDQDHMY
ILAANATAVHVMKLAPDEMTRIQSLDFSVTASNAGLTIDPNNVQGLKVFLK*
Coding >AgabiH97|084800
ATGCAGCTCAGCTTGGCCTCAGTTATCTTGTCCGTCTTATTGGCTTGTCAAGCCAACCCTGCCCCCAGGTGTAAA
GCACCAAGCCACAGCGCGTCAGACAAGTACCTCGGTGATGCGAGTGGACATGTAATTGGAGCAACCTACTTCCTC
ACTGATGAACCCACGGGCAACTTTATCGTGGGCTCGGACATAGGTTCAGATGGTCTACTGACCCTGAGGAGAGCT
GTAAATGCAGGAGGTGTCGGTGCCCATGGTCTCCACGACCTCGGACCCGATCCTCTGTTCAGCCAAGGCTGCATC
GACCTTTCCGCGGAGAAACAAGTTCTAGTGACCGTCAACGCTGGTTCCAACACGGTTGCGGCATTCAAGATCGAT
CCCACCGACCCAACCAACCTGAAGATGTTAGGAAAGCCCGTGGACAGTCATGGTGATTTCCCGGCCTCCGTTGCT
TTGAATAAAGCTGCCGACAAGGCTTGCATCATTAACTCAGGTACTCACGACGGTGTCAGTTGCTACACCCTCGAT
GCAAAGAAGGGTTTGTACGAAATTCCCAACACTGTTCGTCCCGTGGGGCTTAACCAAACCACCCCTCCCACCGGA
ACTTCGGGAACTCTCAGCAACATTATCTTTTCCGAGGACGAGACGAAGCTCTACGTAGCGGTCAAAGGCACGGAC
CCGGCCATAAACGTGGACACTCACCCTGGATTCTTCGCTGTTTGGGATATTCTCCACGACGGATCACTCTCTGAG
AAATACACTCGTATTCCCGTTCCCGAGGGCGGAAAGCAACCGTTCGCCATGACCCCGATACCGAATGAGAACGCG
ATCCTTGGTGCAGACGGCGCAGCCGGCTTCTACGTCTGGGATTTGGAGACGATCGATCAAGGCATCCCAGGCCCT
CGATCTTCGGTCACCCCCGTTGAGGGGCAATCATCGGTTTGCTGGTCGCGTTACAGCCCGTGCACAGGTAACTTC
TATGTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGAGAACTTGAAGCCGACGAAGGTCATG
AACTTCCCCCAAGATATCTTCGACGCCACCATTGATTTCGAAATTGTACCTATTAACGACCAGGACCACATGTAC
ATTCTCGCTGCCAACGCGACTGCCGTTCATGTGATGAAATTGGCACCTGATGAGATGACTCGCATCCAATCACTT
GACTTCTCGGTTACTGCCTCTAATGCTGGCCTTACCATTGACCCTAACAACGTCCAAGGATTGAAAGTCTTCCTC
AAATAG
Transcript >AgabiH97|084800
ATGCAGCTCAGCTTGGCCTCAGTTATCTTGTCCGTCTTATTGGCTTGTCAAGCCAACCCTGCCCCCAGGTGTAAA
GCACCAAGCCACAGCGCGTCAGACAAGTACCTCGGTGATGCGAGTGGACATGTAATTGGAGCAACCTACTTCCTC
ACTGATGAACCCACGGGCAACTTTATCGTGGGCTCGGACATAGGTTCAGATGGTCTACTGACCCTGAGGAGAGCT
GTAAATGCAGGAGGTGTCGGTGCCCATGGTCTCCACGACCTCGGACCCGATCCTCTGTTCAGCCAAGGCTGCATC
GACCTTTCCGCGGAGAAACAAGTTCTAGTGACCGTCAACGCTGGTTCCAACACGGTTGCGGCATTCAAGATCGAT
CCCACCGACCCAACCAACCTGAAGATGTTAGGAAAGCCCGTGGACAGTCATGGTGATTTCCCGGCCTCCGTTGCT
TTGAATAAAGCTGCCGACAAGGCTTGCATCATTAACTCAGGTACTCACGACGGTGTCAGTTGCTACACCCTCGAT
GCAAAGAAGGGTTTGTACGAAATTCCCAACACTGTTCGTCCCGTGGGGCTTAACCAAACCACCCCTCCCACCGGA
ACTTCGGGAACTCTCAGCAACATTATCTTTTCCGAGGACGAGACGAAGCTCTACGTAGCGGTCAAAGGCACGGAC
CCGGCCATAAACGTGGACACTCACCCTGGATTCTTCGCTGTTTGGGATATTCTCCACGACGGATCACTCTCTGAG
AAATACACTCGTATTCCCGTTCCCGAGGGCGGAAAGCAACCGTTCGCCATGACCCCGATACCGAATGAGAACGCG
ATCCTTGGTGCAGACGGCGCAGCCGGCTTCTACGTCTGGGATTTGGAGACGATCGATCAAGGCATCCCAGGCCCT
CGATCTTCGGTCACCCCCGTTGAGGGGCAATCATCGGTTTGCTGGTCGCGTTACAGCCCGTGCACAGGTAACTTC
TATGTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGAGAACTTGAAGCCGACGAAGGTCATG
AACTTCCCCCAAGATATCTTCGACGCCACCATTGATTTCGAAATTGTACCTATTAACGACCAGGACCACATGTAC
ATTCTCGCTGCCAACGCGACTGCCGTTCATGTGATGAAATTGGCACCTGATGAGATGACTCGCATCCAATCACTT
GACTTCTCGGTTACTGCCTCTAATGCTGGCCTTACCATTGACCCTAACAACGTCCAAGGATTGAAAGTCTTCCTC
AAATAG
Gene >AgabiH97|084800
ATGCAGCTCAGCTTGGCCTCAGTTATCTTGTCCGTCTTATTGGCTTGTCAAGCCAACCCTGCCCCCAGGTGTAAA
GCACCAAGCCACAGCGCGTCAGACAAGTACCTCGGTGATGCGAGTGGACATGTAATTGGAGCAACCTACTGTGAA
CTTGGGTTTTTGGTTTCTGTACAATTCTGAAGCTAACTCTATGCGCAGTCCTCACTGATGAACCCACGGGCAACT
TTATCGTGGGCTCGGACATAGGTTCAGATGGTCTACTGGTGAGAGCATTAAACCTGGTTTTGTGTTTGCTAGTCA
GCTAAACTTTTGACTATCGCAGACCCTGAGGAGAGCTGTAAATGCAGGAGGTGTCGGTGCCCATGGTCTCCACGA
CCTCGGACCCGATCCTCTGTTCAGCCAAGGCTGCATCGACCTTTCCGCGGAGAAACAAGTTCTAGTGACCGTCAA
CGTTAGCTCATTTCTTCTCGTTATGGATCCTTGTTTTTAAACGTACCATCCAGGCTGGTTCCAACACGGTTGCGG
CATTCAAGATCGATCCCACCGACCCAACCAACCTGAAGATGTTAGGAAAGCCCGTGGACAGTCATGGTGATTTCC
CGGCCTCCGTTGCTTTGAATAAAGCTGCCGACAAGGCTTGCATCATTAACTCAGGTACTCACGACGGTGTCAGGT
AAGATCCCTGCAATTAGTTTGCTTTTGAATTCTAGTTCACTAAACTGAGTGCTTAGTTGCTACACCCTCGATGCA
AAGAAGGGTTTGTACGAAATTCCCAACACTGTTCGTCCCGTGGGGCTTAACCAAACCACCCCTCCCACCGGAACT
TCGGGAACTCTCAGCAACATTATCTTTTCCGAGGACGAGACGAAGCTCTACGTAGCGGTCAAAGGCACGGACCCG
GCCATAAACGTGGACACTCACCCTGGATTCTTCGCTGTTTGGGATATTCTCCACGACGGATCACTCTCTGAGAAA
TACACTCGTATTCCCGTTCCCGAGGGCGGAAAGCAACCGTTCGCCATGACCCCGATACCGAATGAGAACGCGATC
CTTGGTGCAGACGGCGCAGCCGGCTTCTACGTCTGGGATTTGGAGACGATCGATCAAGGCATCCCAGGCCCTCGA
TCTTCGGTCACCCCCGTTGAGGGGCAATCATCGGTTTGCTGGTCGCGTTACAGCCCGTGCACAGGTAACTTCTAT
GTTGTCGATGGTGTGATCTCCAACATCACCCAGGTCACCCTCGACGAGAACTTGAAGCCGACGAAGGTCATGGTG
AGTGCTTTATGTGTTTTGAAGTTTCGAGCGAGATCTTATAGACTTTATCTGCAGAACTTCCCCCAAGATATCTTC
GACGCCACCATTGATTTCGAAATTGTACCTATTAACGACCAGGAGTAAGCATATGTTGTTTTTATCTTGACGCCA
TGAACGAGCTCATATTGGACGAATAGCCACATGTACATTCTCGCTGCCAACGCGACTGCCGTTCATGTGATGAAA
TTGGCACCTGATGAGATGACTCGCATCCAATCACTTGACTTCTCGGTTACTGCCTCTAATGCTGGCCTTACCATT
GGTAAAATTTCCTTCTTGTTCAAATCTACAAAGATGATTCTTATTCGCGATTGCAGACCCTAACAACGTCCAAGG
ATTGAAAGTCTTCCTCAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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