© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|084700 |
| Gene name | |
| Location | scaffold_5:1615602..1617005 |
| Strand | + |
| Gene length (bp) | 1403 |
| Transcript length (bp) | 1041 |
| Coding sequence length (bp) | 1041 |
| Protein length (aa) | 347 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16884 | ADH_N_2 | N-terminal domain of oxidoreductase | 7.8E-27 | 7 | 117 |
| PF00107 | ADH_zinc_N | Zinc-binding dehydrogenase | 4.1E-17 | 165 | 293 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O34812|YFMJ_BACSU | Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1 | 7 | 343 | 2.0E-60 |
| sp|P76113|CURA_ECOLI | NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3 | 4 | 341 | 6.0E-58 |
| sp|Q9SLN8|DBR_TOBAC | 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum GN=DBR PE=1 SV=1 | 38 | 341 | 3.0E-50 |
| sp|Q39173|P2_ARATH | NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2 | 38 | 341 | 9.0E-47 |
| sp|Q5BK81|PTGR2_RAT | Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2 | 7 | 343 | 3.0E-45 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O34812|YFMJ_BACSU | Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1 | 7 | 343 | 2.0E-60 |
| sp|P76113|CURA_ECOLI | NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3 | 4 | 341 | 6.0E-58 |
| sp|Q9SLN8|DBR_TOBAC | 2-alkenal reductase (NADP(+)-dependent) OS=Nicotiana tabacum GN=DBR PE=1 SV=1 | 38 | 341 | 3.0E-50 |
| sp|Q39173|P2_ARATH | NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2 | 38 | 341 | 9.0E-47 |
| sp|Q5BK81|PTGR2_RAT | Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2 | 7 | 343 | 3.0E-45 |
| sp|Q32L99|PTGR2_BOVIN | Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1 | 7 | 343 | 5.0E-45 |
| sp|Q39172|P1_ARATH | NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1 | 38 | 341 | 8.0E-45 |
| sp|Q8VDQ1|PTGR2_MOUSE | Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2 | 7 | 343 | 5.0E-44 |
| sp|Q5R806|PTGR2_PONAB | Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2 | 7 | 343 | 1.0E-43 |
| sp|Q8N8N7|PTGR2_HUMAN | Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1 | 7 | 343 | 1.0E-43 |
| sp|Q9C0Y6|YKM8_SCHPO | Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1 | 43 | 341 | 2.0E-42 |
| sp|Q3SZJ4|PTGR1_BOVIN | Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1 | 41 | 337 | 3.0E-41 |
| sp|Q9EQZ5|PTGR1_CAVPO | Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1 | 39 | 336 | 1.0E-40 |
| sp|Q14914|PTGR1_HUMAN | Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2 | 39 | 337 | 7.0E-40 |
| sp|Q91YR9|PTGR1_MOUSE | Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=1 SV=2 | 29 | 337 | 8.0E-40 |
| sp|Q6WAU0|PULR_MENPI | (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1 | 7 | 341 | 1.0E-39 |
| sp|P97584|PTGR1_RAT | Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3 | 32 | 337 | 1.0E-39 |
| sp|Q29073|PTGR1_PIG | Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1 | 21 | 337 | 2.0E-38 |
| sp|Q03102|YMN1_YEAST | Uncharacterized membrane protein YML131W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML131W PE=1 SV=1 | 41 | 341 | 2.0E-37 |
| sp|Q28719|PTGR1_RABIT | Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1 | 39 | 333 | 7.0E-34 |
| sp|Q8N4Q0|ZADH2_HUMAN | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1 | 37 | 346 | 1.0E-27 |
| sp|Q8BGC4|ZADH2_MOUSE | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=1 SV=1 | 3 | 346 | 3.0E-27 |
| sp|Q24K16|ZADH2_BOVIN | Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1 | 37 | 346 | 1.0E-23 |
| sp|P42865|QOR_LEIAM | Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1 | 64 | 338 | 6.0E-19 |
| sp|O97764|QOR_BOVIN | Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2 | 37 | 251 | 5.0E-17 |
| sp|Q08257|QOR_HUMAN | Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1 | 37 | 251 | 1.0E-15 |
| sp|Q5R4S7|QOR_PONAB | Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1 | 37 | 251 | 1.0E-15 |
| sp|P11415|QOR_CAVPO | Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1 | 37 | 250 | 5.0E-15 |
| sp|Q0MVN8|QOR_PIG | Quinone oxidoreductase OS=Sus scrofa GN=CRYZ PE=2 SV=1 | 37 | 251 | 1.0E-14 |
| sp|Q28452|QOR_LAMGU | Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1 | 37 | 251 | 3.0E-14 |
| sp|P40783|QOR_SALTY | Quinone oxidoreductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=qor PE=3 SV=2 | 67 | 280 | 4.0E-14 |
| sp|P28304|QOR1_ECOLI | Quinone oxidoreductase 1 OS=Escherichia coli (strain K12) GN=qorA PE=1 SV=1 | 67 | 281 | 7.0E-14 |
| sp|O74489|QOR_SCHPO | Probable quinone oxidoreductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zta1 PE=1 SV=2 | 78 | 341 | 9.0E-14 |
| sp|P47199|QOR_MOUSE | Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=1 SV=1 | 37 | 250 | 2.0E-12 |
| sp|Q6AYT0|QOR_RAT | Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1 | 27 | 250 | 1.0E-11 |
| sp|P96202|PPSC_MYCTU | Phthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ppsC PE=1 SV=2 | 132 | 343 | 8.0E-11 |
| sp|Q7TXL8|PPSC_MYCBO | Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsC PE=1 SV=1 | 132 | 343 | 8.0E-11 |
| sp|B2HIL7|MSL7_MYCMM | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=pks15/1 PE=1 SV=1 | 77 | 344 | 3.0E-10 |
| sp|Q9XXC8|MECR2_CAEEL | Probable trans-2-enoyl-CoA reductase 2, mitochondrial OS=Caenorhabditis elegans GN=Y48A6B.9 PE=3 SV=1 | 35 | 203 | 9.0E-10 |
| sp|A6QQF5|QORL2_BOVIN | Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2 | 81 | 338 | 6.0E-09 |
| sp|Q59I44|CAA43_BURSP | 2-haloacrylate reductase OS=Burkholderia sp. GN=caa43 PE=1 SV=1 | 21 | 237 | 6.0E-09 |
| sp|Q02251|MCAS_MYCBO | Mycocerosic acid synthase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mas PE=1 SV=2 | 80 | 259 | 2.0E-08 |
| sp|Q53FA7|QORX_HUMAN | Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2 | 36 | 250 | 3.0E-08 |
| sp|B0BNC9|QORL2_RAT | Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1 | 81 | 296 | 5.0E-08 |
| sp|P43903|QOR_PSEAE | Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2 | 77 | 237 | 8.0E-08 |
| sp|P12276|FAS_CHICK | Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5 | 139 | 341 | 9.0E-08 |
| sp|Q8WWV3|RT4I1_HUMAN | Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2 | 81 | 230 | 9.0E-08 |
| sp|P96285|PKS1_MYCTU | Putative inactive phenolphthiocerol synthesis polyketide synthase type I Pks1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pks1 PE=1 SV=4 | 77 | 344 | 1.0E-07 |
| sp|Q99536|VAT1_HUMAN | Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2 | 66 | 230 | 1.0E-07 |
| sp|Q7TXK8|MSL7_MYCBO | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pks15/1 PE=1 SV=1 | 77 | 344 | 1.0E-07 |
| sp|B0G170|PKS28_DICDI | Probable polyketide synthase 28 OS=Dictyostelium discoideum GN=pks28 PE=3 SV=1 | 81 | 247 | 4.0E-07 |
| sp|O35017|YOGA_BACSU | Uncharacterized zinc-type alcohol dehydrogenase-like protein YogA OS=Bacillus subtilis (strain 168) GN=yogA PE=3 SV=1 | 104 | 260 | 8.0E-07 |
| sp|Q8CRJ7|ZDH1_STAES | Zinc-type alcohol dehydrogenase-like protein SE_1777 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1777 PE=3 SV=1 | 37 | 338 | 1.0E-06 |
| sp|Q84V25|ENOXE_FRAAN | 2-methylene-furan-3-one reductase OS=Fragaria ananassa GN=EO PE=1 SV=1 | 26 | 229 | 2.0E-06 |
| sp|Q3UNZ8|QORL2_MOUSE | Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=1 SV=1 | 81 | 296 | 2.0E-06 |
| sp|Q5HM44|ZDH1_STAEQ | Zinc-type alcohol dehydrogenase-like protein SERP1785 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1785 PE=3 SV=1 | 37 | 338 | 3.0E-06 |
| sp|Q54FI3|PKS37_DICDI | Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1 | 138 | 286 | 4.0E-06 |
| sp|O42909|YBI2_SCHPO | Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.02c PE=3 SV=1 | 133 | 233 | 5.0E-06 |
| sp|Q54G30|PKS27_DICDI | Probable polyketide synthase 27 OS=Dictyostelium discoideum GN=pks27 PE=3 SV=1 | 81 | 247 | 7.0E-06 |
| sp|Q54YT4|MECR_DICDI | Trans-2-enoyl-CoA reductase, mitochondrial OS=Dictyostelium discoideum GN=mecr PE=3 SV=1 | 39 | 288 | 9.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 148.64 | 86.76 | 210.52 |
| Initials | Initials knots | 98.13 | 59.11 | 137.16 |
| Pileal_Stipeal_center | Stage I stipe center | 136.69 | 82.37 | 191.02 |
| Pileal_Stipeal_shell | Stage I stipe shell | 179.46 | 105.99 | 252.93 |
| DIF_stipe_center | Stage II stipe center | 152.28 | 90.96 | 213.59 |
| DIF_stipe_shell | Stage II stipe shell | 132.18 | 78.42 | 185.94 |
| DIF_stipe_skin | Stage II stipe skin | 152.35 | 91.28 | 213.43 |
| DIF_cap_skin | Stage II cap skin | 260.02 | 147.99 | 372.05 |
| DIF_cap_tissue | Stage II cap tissue | 313.57 | 175.43 | 451.71 |
| DIF_gill_tissue | Stage II gill tissue | 209.49 | 123.77 | 295.21 |
| YFB_stipe_center | Young fruiting body stipe center | 195.46 | 114.97 | 275.95 |
| YFB_stipe_shell | Young fruiting body stipe shell | 179.37 | 106.31 | 252.42 |
| YFB_stipe_skin | Young fruiting body stipe skin | 143.87 | 86.39 | 201.35 |
| YFB_cap_skin | Young fruiting body cap skin | 152.32 | 91.39 | 213.25 |
| YFB_cap_tissue | Young fruiting body cap tissue | 150.33 | 89.72 | 210.95 |
| YFB_gill_tissue | Young fruiting body gill tissue | 131.88 | 79.10 | 184.65 |
| YFB_veil | Young fruiting body veil | 173.60 | 103.20 | 244.01 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.280565 | no |
| Casing | YFB_stipe_center | 0.428612 | no |
| Casing | YFB_stipe_shell | 0.626370 | no |
| Casing | YFB_stipe_skin | 0.953517 | no |
| Casing | YFB_cap_skin | 0.966564 | no |
| Casing | YFB_cap_tissue | 0.984663 | no |
| Casing | YFB_gill_tissue | 0.787509 | no |
| Casing | YFB_veil | 0.714706 | no |
| Casing | Initials | 0.153005 | no |
| Casing | Pileal_Stipeal_center | 0.866879 | no |
| Casing | Pileal_Stipeal_shell | 0.625629 | no |
| Casing | DIF_stipe_center | 0.966930 | no |
| Casing | DIF_stipe_shell | 0.797377 | no |
| Casing | DIF_stipe_skin | 0.966113 | no |
| Casing | DIF_cap_skin | 0.055182 | no |
| Casing | DIF_cap_tissue | 0.007439 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.891802 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.705321 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.205887 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.320267 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.296112 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.102020 | no |
| DIF_gill_tissue | YFB_veil | 0.631957 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.858325 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.336597 | no |
| YFB_stipe_center | YFB_cap_skin | 0.474542 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.445572 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.183181 | no |
| YFB_stipe_center | YFB_veil | 0.794928 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.529701 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.680906 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.647988 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.323876 | no |
| YFB_stipe_shell | YFB_veil | 0.953810 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.911562 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.932959 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.849265 | no |
| YFB_stipe_skin | YFB_veil | 0.622426 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.980852 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.724552 | no |
| YFB_cap_skin | YFB_veil | 0.764841 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.757433 | no |
| YFB_cap_tissue | YFB_veil | 0.738026 | no |
| YFB_gill_tissue | YFB_veil | 0.400535 | no |
| Initials | DIF_gill_tissue | 0.004160 | yes |
| Initials | YFB_stipe_center | 0.008121 | yes |
| Initials | YFB_stipe_shell | 0.019442 | yes |
| Initials | YFB_stipe_skin | 0.182806 | no |
| Initials | YFB_cap_skin | 0.113653 | no |
| Initials | YFB_cap_tissue | 0.133562 | no |
| Initials | YFB_gill_tissue | 0.349228 | no |
| Initials | YFB_veil | 0.031088 | yes |
| Initials | Pileal_Stipeal_center | 0.277981 | no |
| Initials | Pileal_Stipeal_shell | 0.018066 | yes |
| Initials | DIF_stipe_center | 0.121416 | no |
| Initials | DIF_stipe_shell | 0.354742 | no |
| Initials | DIF_stipe_skin | 0.119313 | no |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.135743 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.237992 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.407377 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.921871 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.811913 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.837067 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.945095 | no |
| Pileal_Stipeal_center | YFB_veil | 0.495502 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.407377 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.812501 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.950805 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.811913 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.022892 | yes |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.002951 | yes |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.707700 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.860931 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.998855 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.527706 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.680265 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.648699 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.321985 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.952530 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.681587 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.339840 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.685225 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.245540 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.054375 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.322151 | no |
| DIF_stipe_center | YFB_stipe_center | 0.483189 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.684468 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.912650 | no |
| DIF_stipe_center | YFB_cap_skin | 0.999257 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.981843 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.730728 | no |
| DIF_stipe_center | YFB_veil | 0.769519 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.743305 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.998891 | no |
| DIF_stipe_center | DIF_cap_skin | 0.062420 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.008121 | yes |
| DIF_stipe_shell | DIF_gill_tissue | 0.107290 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.190009 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.337393 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.858624 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.734649 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.764493 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.995933 | no |
| DIF_stipe_shell | YFB_veil | 0.418605 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.736746 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.014668 | yes |
| DIF_stipe_shell | DIF_cap_tissue | 0.002525 | yes |
| DIF_stipe_skin | DIF_gill_tissue | 0.317599 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.474005 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.680811 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.910919 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.999643 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.980609 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.724689 | no |
| DIF_stipe_skin | YFB_veil | 0.766858 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.064141 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.010093 | yes |
| DIF_cap_skin | DIF_gill_tissue | 0.584547 | no |
| DIF_cap_skin | YFB_stipe_center | 0.425028 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.246193 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.035537 | yes |
| DIF_cap_skin | YFB_cap_skin | 0.062610 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.055583 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.010093 | yes |
| DIF_cap_skin | YFB_veil | 0.195806 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.675148 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.207523 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.120821 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.056760 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.004548 | yes |
| DIF_cap_tissue | YFB_cap_skin | 0.007782 | yes |
| DIF_cap_tissue | YFB_cap_tissue | 0.007782 | yes |
| DIF_cap_tissue | YFB_gill_tissue | 0.001625 | yes |
| DIF_cap_tissue | YFB_veil | 0.042475 | yes |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|084700 MSPQNYKRIVLNSRPEGDIEPNTFRTEVLPFTSLGSPGNKQCLVQCTWLSLDPAMRGWLRDTRSYLPPVQIGETM RAQGLGVVLAVGEDSKFKVGDHVTGAWGMTEYAVVPDQRLEKLEIYPGVQPLDYLNTLGGSGLTAYFGLKKIGEL KPGEKLVVSGAAGSVGSLVCQLGKAAGAKVYAIAGTSEKCEWLEKDIGVEKAFNYKSPTFMEDFKKSVGYLDVFF DNVGGDMLDSMLGRLNKDARIILCGAISQYNATKPKGLQSYLNLISQRAKMQGFIVFDYAQEYPVAIAEMGKGLV DGSIQRRFHIVDGGIEEAPRALPMLFSGGNTGKLVVKVAEDPSAKL* |
| Coding | >AgabiH97|084700 ATGTCTCCACAAAACTACAAACGCATTGTTCTCAACTCACGGCCTGAAGGCGACATCGAACCAAACACATTTCGC ACTGAAGTGCTTCCGTTCACTTCACTTGGTTCTCCAGGAAATAAGCAATGTCTAGTGCAGTGCACATGGCTGTCG CTAGATCCTGCTATGAGAGGTTGGCTCCGTGACACACGAAGCTATCTGCCTCCAGTTCAGATTGGTGAAACTATG AGGGCACAAGGATTGGGCGTTGTTCTTGCTGTCGGAGAGGACAGTAAGTTCAAGGTTGGCGACCATGTTACTGGC GCATGGGGGATGACGGAGTACGCGGTTGTTCCTGATCAAAGACTTGAGAAGCTTGAGATCTATCCAGGTGTTCAA CCGTTGGACTACCTGAATACTCTTGGTGGATCCGGACTCACAGCGTATTTCGGACTCAAAAAGATTGGTGAGCTC AAACCAGGAGAGAAGCTCGTCGTATCAGGAGCCGCAGGCTCAGTCGGTTCTCTTGTGTGCCAACTTGGAAAGGCT GCAGGAGCAAAAGTCTATGCCATCGCTGGTACATCAGAGAAATGTGAGTGGTTAGAAAAGGATATTGGTGTCGAG AAGGCTTTCAACTACAAGAGTCCGACATTCATGGAAGACTTTAAAAAGAGTGTGGGATACCTGGATGTGTTCTTT GACAACGTTGGTGGAGATATGTTGGATTCCATGCTGGGAAGACTGAATAAGGATGCTCGGATTATCCTTTGTGGG GCCATCTCGCAGTACAACGCGACAAAGCCAAAGGGTCTTCAATCGTATCTTAACCTGATATCTCAGCGTGCCAAA ATGCAAGGCTTCATCGTGTTCGATTATGCCCAAGAGTATCCTGTTGCTATCGCAGAAATGGGCAAAGGACTGGTC GATGGCAGTATCCAACGGCGTTTCCACATCGTTGACGGTGGTATTGAAGAGGCACCTAGAGCTTTACCAATGCTG TTTTCAGGCGGGAATACGGGTAAACTAGTCGTAAAGGTGGCGGAAGACCCCAGCGCGAAGCTATGA |
| Transcript | >AgabiH97|084700 ATGTCTCCACAAAACTACAAACGCATTGTTCTCAACTCACGGCCTGAAGGCGACATCGAACCAAACACATTTCGC ACTGAAGTGCTTCCGTTCACTTCACTTGGTTCTCCAGGAAATAAGCAATGTCTAGTGCAGTGCACATGGCTGTCG CTAGATCCTGCTATGAGAGGTTGGCTCCGTGACACACGAAGCTATCTGCCTCCAGTTCAGATTGGTGAAACTATG AGGGCACAAGGATTGGGCGTTGTTCTTGCTGTCGGAGAGGACAGTAAGTTCAAGGTTGGCGACCATGTTACTGGC GCATGGGGGATGACGGAGTACGCGGTTGTTCCTGATCAAAGACTTGAGAAGCTTGAGATCTATCCAGGTGTTCAA CCGTTGGACTACCTGAATACTCTTGGTGGATCCGGACTCACAGCGTATTTCGGACTCAAAAAGATTGGTGAGCTC AAACCAGGAGAGAAGCTCGTCGTATCAGGAGCCGCAGGCTCAGTCGGTTCTCTTGTGTGCCAACTTGGAAAGGCT GCAGGAGCAAAAGTCTATGCCATCGCTGGTACATCAGAGAAATGTGAGTGGTTAGAAAAGGATATTGGTGTCGAG AAGGCTTTCAACTACAAGAGTCCGACATTCATGGAAGACTTTAAAAAGAGTGTGGGATACCTGGATGTGTTCTTT GACAACGTTGGTGGAGATATGTTGGATTCCATGCTGGGAAGACTGAATAAGGATGCTCGGATTATCCTTTGTGGG GCCATCTCGCAGTACAACGCGACAAAGCCAAAGGGTCTTCAATCGTATCTTAACCTGATATCTCAGCGTGCCAAA ATGCAAGGCTTCATCGTGTTCGATTATGCCCAAGAGTATCCTGTTGCTATCGCAGAAATGGGCAAAGGACTGGTC GATGGCAGTATCCAACGGCGTTTCCACATCGTTGACGGTGGTATTGAAGAGGCACCTAGAGCTTTACCAATGCTG TTTTCAGGCGGGAATACGGGTAAACTAGTCGTAAAGGTGGCGGAAGACCCCAGCGCGAAGCTATGA |
| Gene | >AgabiH97|084700 ATGTCTCCACAAAACTACAAACGCATTGTTCTCAACTCACGGCCTGAAGGCGACATCGAACCAAACACATTTCGC ACTGAAGTGCTTCCGTTCACTTCACTTGGTTCTCCAGGAAATAAGCAATGTCTAGTGCAGTGCACATGGCTGTCG CTAGATCCTGCTATGAGAGGTTGGCTCCGTGACACACGAAGCTATCTGCCTCCAGTTCAGATTGGTGAAGTGAGG CTACAATGTTTTGGTCTACCGTGCAACAGTCCCTGACAAAAACATGATAGACTATGAGGGCACAAGGATTGGGCG TTGTTCTTGCTGTCGGAGAGGACAGTAAGTTCAAGGTTGGCGACCATGTTACTGGCGCATGGGGTGCGTGTTCTC AGTCGACCACCGACTTTGCATTGGACTCATTGTGCTGCATAGGGATGACGGAGTACGCGGTTGTTCCTGATCAAA GACTTGAGAAGCTTGAGTATGTGATTTTTATGTTTTCTTGTTCTTTTTGTTGACGAATATCAGGATCTATCCAGG TGTTCAACCGTTGGACTACCTGAATACTCTTGGTGGATCCGGACTCACAGCGTATTTCGGACTCAAAAAGATTGG TGAGCTCAAACCAGGAGAGAAGCTCGTCGTATCAGGAGCCGCAGGCTCAGTCGGTTCTCTTGTGTGCCAACTTGG AAAGGCTGCAGGAGCAAAAGTCTATGCCATCGCTGGTACATCAGAGAAATGTGAGTGGTTAGAAAAGGATATTGG TGTCGAGAAGGCTTTCAACTACAAGAGTCCGACATTCATGGAAGACTTTAAAAAGAGTGTGGGATACCTGGATGT GTTCTTTGACAACGTTGGTGGAGATATGTTGGATTCCATGCTGGGAAGACTGAATAAGGATGCTCGGATTATCCT TTGTGGTAAGCTTCAATATATAAAGAGAGTGATCTGCGATTAATCGAGACACAGGGGCCATCTCGCAGTACAGTG AGCAAACTTATCATTCTCGAGTTTTATTTTTCACTGAGAATTCTGTTCAAGACGCGACAAAGCCAAAGGGTCTTC AATCGTATCTTAACCTGATATCTCAGCGTGCCAAAATGCAAGGCTTCATCGTGTAATGGCATTTTATTTGTTTTC CCTTTATAAATTTACCGACTCCAACGCTAGGTTCGATTATGCCCAAGAGTATCCTGTTGCTATCGCAGAAATGGG CAAAGGACTGGTCGATGGCAGTATCCAACGGCGTTTCCACATCGTTGACGGTGGTATTGAAGAGGCACCTAGAGC TTTACCAATGCTGTTTTCAGGCGGGAATACGGGTAAACTGTATGTGAATATGTCGTCTTATTGCATATGGGCTAA ATTTGTTCTTCAGAGTCGTAAAGGTGGCGGAAGACCCCAGCGCGAAGCTATGA |