Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|084350
Gene name
Locationscaffold_5:1536438..1537477
Strand-
Gene length (bp)1039
Transcript length (bp)639
Coding sequence length (bp)639
Protein length (aa) 213

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|084350
MQLTIATAAALALVYARSAFAVMGIDTPSTLVQCQPSLLAWHEGAPPYYLSVIPGGQPGATPLKSFDAVNDLSRT
WVVDIASGTVVTIVLKDSSGAIAYSDKVPIQGSQDNSCIIPAAAPAPAPASATAAAPAPPANGASVSPASPAPAS
QPPAAPAVSPPAGQAPPPPASRPTGSQAAVASSSAKPSSGANRASVVNGFAGLLAILGVALF*
Coding >AgabiH97|084350
ATGCAGCTCACTATTGCTACTGCCGCCGCCCTCGCCCTTGTCTATGCGCGATCCGCTTTCGCCGTCATGGGTATC
GATACCCCTTCGACCCTTGTGCAATGCCAACCGTCCCTTTTGGCGTGGCACGAGGGTGCGCCTCCCTATTACCTC
TCTGTCATCCCGGGTGGTCAGCCCGGTGCAACTCCGCTTAAATCTTTTGATGCGGTGAATGATTTATCCCGCACT
TGGGTCGTCGATATTGCGAGCGGAACAGTAGTTACCATCGTGCTCAAGGATTCTTCAGGTGCTATCGCATACAGC
GACAAAGTACCCATTCAAGGGAGCCAAGATAACTCGTGTATAATTCCCGCTGCGGCACCAGCACCAGCACCAGCG
TCGGCGACCGCTGCCGCTCCTGCACCCCCAGCCAACGGGGCTAGCGTATCTCCTGCGTCTCCTGCTCCTGCTAGC
CAACCTCCTGCTGCTCCAGCAGTAAGCCCCCCCGCTGGACAGGCTCCTCCCCCACCCGCCTCCAGGCCCACTGGT
TCTCAGGCAGCCGTTGCTTCTTCTAGTGCTAAGCCTTCAAGCGGTGCCAATCGCGCCTCGGTTGTCAACGGATTC
GCTGGGCTTCTAGCGATTCTTGGTGTCGCACTTTTCTAA
Transcript >AgabiH97|084350
ATGCAGCTCACTATTGCTACTGCCGCCGCCCTCGCCCTTGTCTATGCGCGATCCGCTTTCGCCGTCATGGGTATC
GATACCCCTTCGACCCTTGTGCAATGCCAACCGTCCCTTTTGGCGTGGCACGAGGGTGCGCCTCCCTATTACCTC
TCTGTCATCCCGGGTGGTCAGCCCGGTGCAACTCCGCTTAAATCTTTTGATGCGGTGAATGATTTATCCCGCACT
TGGGTCGTCGATATTGCGAGCGGAACAGTAGTTACCATCGTGCTCAAGGATTCTTCAGGTGCTATCGCATACAGC
GACAAAGTACCCATTCAAGGGAGCCAAGATAACTCGTGTATAATTCCCGCTGCGGCACCAGCACCAGCACCAGCG
TCGGCGACCGCTGCCGCTCCTGCACCCCCAGCCAACGGGGCTAGCGTATCTCCTGCGTCTCCTGCTCCTGCTAGC
CAACCTCCTGCTGCTCCAGCAGTAAGCCCCCCCGCTGGACAGGCTCCTCCCCCACCCGCCTCCAGGCCCACTGGT
TCTCAGGCAGCCGTTGCTTCTTCTAGTGCTAAGCCTTCAAGCGGTGCCAATCGCGCCTCGGTTGTCAACGGATTC
GCTGGGCTTCTAGCGATTCTTGGTGTCGCACTTTTCTAA
Gene >AgabiH97|084350
ATGCAGCTCACTATTGCTACTGCCGCCGCCCTCGCCCTTGTCTATGCGCGATCCGCTTTCGCCGTCATGGGTATC
GATACCCCGTACGTTGCCCGTACTCTTCACATCACGCGTATACTCACCTCCATTCCAGTTCGACCCTTGTGCAAT
GCCGTGTGTAGATGATAATTCATTTTTTCAACGTTTCAACTGAGCACCATGCCATCGTTATATAGAACCGTCCCT
TTTGGCGTGGCACGAGGGTGCGCCTCCCTATTACCTCTCTGTCATCCCGGGTGCGTTGTGTCGTTGATATGCTTG
GTTGAACGAATTGAATTCTGAGACAATGTATTTAGGTGGTCAGCCCGGTGCAACTCCGGTGAGTTTTCGAGGGCT
CGACATGCTATTTTGAGTATTTGATCTGACTTTTTTGGTGCATAGCTTAAATCTTTTGATGCGGTGAATGATTTA
TCCCGCACTTGGGTCGTCGATATTGCGAGCGGAACAGTAGTGTGCGTGATCGCTTATGTGATGTGTCGATATATG
CTTATCGTGTTTGGTTAGTACCATCGTGCTCAAGGATTCTTCAGGTGCTATCGCATACAGCGACAAAGTACCCAT
TCAAGGGAGCCAAGATAACTCGTATACTGCTTTCTATATGGGGTTAATGTCTTTGATCTAATTAATTTTATCTCG
TGTAGGTGTATAATTCCCGCTGCGGCACCAGCACCAGCACCAGCGTCGGCGACCGCTGCCGCTCCTGCACCCCCA
GCCAACGGGGCTAGCGTATCTCCTGCGTCTCCTGCTCCTGCTAGCCAACCTCCTGCTGCTCCAGCAGTAAGCCCC
CCCGCTGGACAGGCTCCGTGAGTGGCATTATTTGTGCTATCAGTGACGGACATATATTTATACTTGCATAAGTCC
CCCACCCGCCTCCAGGCCCACTGGTTCTCAGGCAGCCGTTGCTTCTTCTAGTGCTAAGCCTTCAAGCGGTGCCAA
TCGCGCCTCGGTTGTCAACGGATTCGCTGGGCTTCTAGCGATTCTTGGTGTCGCACTTTTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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