Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|084130
Gene name
Locationscaffold_5:1475563..1477093
Strand+
Gene length (bp)1530
Transcript length (bp)939
Coding sequence length (bp)939
Protein length (aa) 313

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01575 MaoC_dehydratas MaoC like domain 2.1E-29 178 286

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fox-2 PE=1 SV=1 32 295 6.0E-96
sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3 29 307 2.0E-69
sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=2 SV=1 32 297 9.0E-67
sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2 PE=1 SV=1 32 290 1.0E-64
sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3 33 307 2.0E-60
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fox-2 PE=1 SV=1 32 295 6.0E-96
sp|P51659|DHB4_HUMAN Peroxisomal multifunctional enzyme type 2 OS=Homo sapiens GN=HSD17B4 PE=1 SV=3 29 307 2.0E-69
sp|Q02207|FOX2_YEAST Peroxisomal hydratase-dehydrogenase-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FOX2 PE=2 SV=1 32 297 9.0E-67
sp|Q8VYI3|ECH2_ARATH Enoyl-CoA hydratase 2, peroxisomal OS=Arabidopsis thaliana GN=ECH2 PE=1 SV=1 32 290 1.0E-64
sp|P51660|DHB4_MOUSE Peroxisomal multifunctional enzyme type 2 OS=Mus musculus GN=Hsd17b4 PE=1 SV=3 33 307 2.0E-60
sp|P97852|DHB4_RAT Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus GN=Hsd17b4 PE=1 SV=3 33 307 5.0E-60
sp|Q9VXJ0|DHB4_DROME Peroxisomal multifunctional enzyme type 2 OS=Drosophila melanogaster GN=Mfe2 PE=1 SV=1 32 295 3.0E-58
sp|P22414|FOX2_CANTR Peroxisomal hydratase-dehydrogenase-epimerase OS=Candida tropicalis PE=1 SV=2 32 295 1.0E-56
sp|Q54XZ0|MFEB_DICDI Probable enoyl-CoA hydratase 2 OS=Dictyostelium discoideum GN=mfeB PE=2 SV=1 18 296 2.0E-55
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|084130
MSVFKNTDAFADPEDAQLVADAKKIIPDPVPYTYTERDVILYNLGIGATEKELQWIFEGDDEFGALPTFGVIPQF
PATSGVPLDFLPNFNPAKLLHGEQYMSIKAPIPTSGSLVTEARILEVLDKGKAAAVTAIAETRDTKTGQVIFENQ
STVFIRGSGGFGGKRVGKDRGPASASNAPPKRAPDAVAEEKTSPTQAALYRMSGDLNPLHILPEFAAIGGFDKPI
LPGLCTMGIAAKHVLKTYGPYKDIKIRFAGVVYPGETIVTEMWKEGSKVIFTAKVKERNATALAAAAVTLDHVPA
VDLNLPSTFSSK*
Coding >AgabiH97|084130
ATGTCCGTCTTCAAGAACACAGACGCCTTTGCTGACCCAGAGGACGCCCAGCTCGTCGCAGACGCCAAGAAAATC
ATCCCCGACCCCGTTCCATACACCTACACCGAGAGGGACGTGATTCTTTACAACTTGGGCATCGGTGCGACGGAG
AAAGAACTGCAGTGGATCTTTGAAGGTGACGACGAATTTGGCGCCTTGCCAACATTCGGCGTCATCCCGCAATTC
CCTGCTACTTCTGGCGTACCTCTTGACTTCCTTCCCAACTTCAATCCTGCGAAATTGCTTCATGGTGAACAATAT
ATGAGCATCAAGGCACCCATTCCGACAAGCGGTTCTCTTGTCACCGAGGCTCGCATTCTCGAGGTCCTCGACAAA
GGAAAGGCAGCGGCAGTCACTGCCATTGCCGAAACCAGGGACACCAAAACTGGGCAAGTCATCTTTGAAAACCAG
TCAACGGTATTCATCCGCGGTTCAGGCGGGTTTGGTGGCAAGCGCGTCGGAAAGGATCGAGGCCCAGCGTCTGCA
TCCAACGCTCCTCCAAAACGCGCTCCAGATGCGGTCGCGGAAGAGAAGACTAGCCCGACCCAGGCGGCCCTCTAC
CGCATGAGCGGTGACCTCAACCCACTCCATATTCTACCTGAATTTGCTGCGATTGGTGGCTTCGACAAGCCCATT
CTCCCTGGTCTCTGCACCATGGGGATTGCCGCAAAACACGTTCTCAAAACTTATGGACCCTACAAGGATATCAAA
ATTCGCTTTGCCGGCGTCGTCTACCCTGGAGAGACCATTGTCACCGAAATGTGGAAAGAGGGTTCTAAAGTCATC
TTTACCGCTAAAGTGAAAGAGCGCAACGCTACAGCGTTGGCCGCAGCAGCTGTGACGTTGGATCATGTCCCTGCT
GTCGATCTGAATCTACCTTCCACGTTTTCATCCAAATGA
Transcript >AgabiH97|084130
ATGTCCGTCTTCAAGAACACAGACGCCTTTGCTGACCCAGAGGACGCCCAGCTCGTCGCAGACGCCAAGAAAATC
ATCCCCGACCCCGTTCCATACACCTACACCGAGAGGGACGTGATTCTTTACAACTTGGGCATCGGTGCGACGGAG
AAAGAACTGCAGTGGATCTTTGAAGGTGACGACGAATTTGGCGCCTTGCCAACATTCGGCGTCATCCCGCAATTC
CCTGCTACTTCTGGCGTACCTCTTGACTTCCTTCCCAACTTCAATCCTGCGAAATTGCTTCATGGTGAACAATAT
ATGAGCATCAAGGCACCCATTCCGACAAGCGGTTCTCTTGTCACCGAGGCTCGCATTCTCGAGGTCCTCGACAAA
GGAAAGGCAGCGGCAGTCACTGCCATTGCCGAAACCAGGGACACCAAAACTGGGCAAGTCATCTTTGAAAACCAG
TCAACGGTATTCATCCGCGGTTCAGGCGGGTTTGGTGGCAAGCGCGTCGGAAAGGATCGAGGCCCAGCGTCTGCA
TCCAACGCTCCTCCAAAACGCGCTCCAGATGCGGTCGCGGAAGAGAAGACTAGCCCGACCCAGGCGGCCCTCTAC
CGCATGAGCGGTGACCTCAACCCACTCCATATTCTACCTGAATTTGCTGCGATTGGTGGCTTCGACAAGCCCATT
CTCCCTGGTCTCTGCACCATGGGGATTGCCGCAAAACACGTTCTCAAAACTTATGGACCCTACAAGGATATCAAA
ATTCGCTTTGCCGGCGTCGTCTACCCTGGAGAGACCATTGTCACCGAAATGTGGAAAGAGGGTTCTAAAGTCATC
TTTACCGCTAAAGTGAAAGAGCGCAACGCTACAGCGTTGGCCGCAGCAGCTGTGACGTTGGATCATGTCCCTGCT
GTCGATCTGAATCTACCTTCCACGTTTTCATCCAAATGA
Gene >AgabiH97|084130
ATGTCCGTCTTCAAGAACACAGACGCCTTTGCTGACCCAGAGGACGCCCAGCTCGTCGCAGACGCCAAGAAAATC
ATCCCCGACCCCGTTCCATACACCTACACCGAGGTGCGCGGCATATTTTGTCTTCTGTAGCTGGCGGCTTACTCG
GACAGAGGGACGTGATTCTTTACAACTTGGGCATCGGTGCGACGGAGAAAGAACTGCAGTGGATCTTTGAAGGTG
ACGACGAATTTGGCGCCTTGCCAACATTCGGCGTCATCCCGCAATTCCCTGCTACTTCTGGCGTACCTCTTGACT
TCCTTCCCAACTTCAATCCTGCAAGTGCCCCCAAATAAATTGTACTTGATGCACTATTTATTCGTTGTTTCATAG
GCGAAATTGCTTCATGGTGAACAATATATGAGCATCAAGGCACCCATTCCGACAAGCGGTTCTCTTGTCACCGAG
GCTCGGTACGTCATATGACACTCAAAGCATAGTATCGATTCATACCAATCACGTTCGGAATAGCATTCTCGAGGT
CCTCGACAAAGGAAAGGCAGCGGCAGTCACTGCCATTGCCGAAACCAGGGACACCAAAACTGGGCAAGTCATCTT
TGAAAACCAGTCAACGGTATTCATCCGCGGTTCAGGCGGGTTTGGTGGCAAGCGCGTCGGAAAGGGTAATACTAT
TTTGACAAGTTTCACACTTGAGACTTATGTTCCTTTGCAGATCGAGGCCCAGCGTCTGCATCCAACGCTCCTCCA
AAACGCGCTCCAGATGCGGTCGCGGAAGAGAAGACTAGCCCGACCCAGGCGGCCCTCTACCGGTAGGTTATCTTT
GCCGCTAGCATCCTATAGTGTGTCTTCTAGTTCCATTGAACCCATATACTCATCATTTCGTTCATCAGCATGAGC
GGTGACCTCAACCCACTCCATGTAAGCATGTTTGCGATGTCTGCTTTTATCCAGAATAATGACGCATACATGTCG
TAGATTCTACCTGAATTTGCTGCGATTGGTGGCTTCGACAAGCCCATTCTCCCTGGTCTCTGCACCATGGGGATT
GCCGCAAAACACGTTCTCAAAACTTATGGACCCTACAAGGATATCAAAATTCGGTACGTCGAATTCACATGAGGC
GGCACGTATTCTTTACCCGTCCTCATGGAACGATATATGCAGCTTTGCCGGCGTCGTCTACCCTGGAGAGACCAT
TGTCACCGAAATGTGGAAAGAGGGTTCTAAAGTCATCTTTAGTGAGTATCATGACAGAGCCCTCGCTAAACAGAT
ACCTAACACTGTATTTATAGCCGCTAAAGTGAAAGAGCGCAACGCTACAGCGTTGGCCGCAGCAGCTGTGACGTT
GGTCCAGGAGCCAAAGGCCATGCTCTAAGGCTTATGATCAAGACACTTTACCTCGAACTAGGATCATGTCCCTGC
TGTCGATCTGAATCTACCTTCCACGTTTTCATGTACTTGCTCTCACGCTGAATATGAACATGCTTTGCCTGCGGC
TAATCTTCTCCATTTGATATAGCCAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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