Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|084040
Gene name
Locationscaffold_5:1458820..1459560
Strand-
Gene length (bp)740
Transcript length (bp)528
Coding sequence length (bp)528
Protein length (aa) 176

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02221 E1_DerP2_DerF2 ML domain 3.1E-28 46 169

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0CP29|NPC2_CRYNB Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=NPC2 PE=3 SV=1 7 173 9.0E-55
sp|P0CP28|NPC2_CRYNJ Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=NPC2 PE=3 SV=1 7 173 9.0E-55
sp|Q4P580|NPC2_USTMA Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ustilago maydis (strain 521 / FGSC 9021) GN=NPC2 PE=3 SV=1 43 173 5.0E-45
sp|Q756Q3|NPC2_ASHGO Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NPC2 PE=3 SV=1 55 170 7.0E-29
sp|Q7RZ85|NPC2_NEUCR Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=npc-2 PE=3 SV=1 54 173 9.0E-28
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Swissprot ID Swissprot Description Start End E-value
sp|P0CP29|NPC2_CRYNB Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=NPC2 PE=3 SV=1 7 173 9.0E-55
sp|P0CP28|NPC2_CRYNJ Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=NPC2 PE=3 SV=1 7 173 9.0E-55
sp|Q4P580|NPC2_USTMA Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ustilago maydis (strain 521 / FGSC 9021) GN=NPC2 PE=3 SV=1 43 173 5.0E-45
sp|Q756Q3|NPC2_ASHGO Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NPC2 PE=3 SV=1 55 170 7.0E-29
sp|Q7RZ85|NPC2_NEUCR Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=npc-2 PE=3 SV=1 54 173 9.0E-28
sp|Q12408|NPC2_YEAST Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NPC2 PE=1 SV=1 55 173 8.0E-27
sp|O94183|NPC2_ASPOR Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pltp PE=1 SV=1 47 175 1.0E-24
sp|Q6BV42|NPC2_DEBHA Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=NPC2 PE=3 SV=1 23 170 6.0E-24
sp|Q5A8A2|NPC2_CANAL Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NPC2 PE=3 SV=1 50 170 8.0E-24
sp|Q6CNE0|NPC2_KLULA Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=NPC2 PE=3 SV=1 56 170 2.0E-23
sp|Q52FS9|NPC2_MAGO7 Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=NPC2 PE=3 SV=2 1 172 3.0E-23
sp|Q4X136|NPC2_ASPFU Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=npc2 PE=3 SV=2 49 174 4.0E-23
sp|Q6CHU5|NPC2_YARLI Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NPC2 PE=3 SV=1 55 170 7.0E-23
sp|D4AYQ6|NPC2_ARTBC Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_01325 PE=1 SV=1 25 170 1.0E-20
sp|Q6FNB1|NPC2_CANGA Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NPC2 PE=3 SV=1 55 170 4.0E-20
sp|Q9C0X9|NPC2_SCHPO Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=npc2 PE=3 SV=1 54 175 6.0E-20
sp|Q5B0Q1|NPC2_EMENI Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=npc2 PE=3 SV=1 4 164 2.0E-19
sp|Q54SZ9|Y2107_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107 OS=Dictyostelium discoideum GN=DDB_G0282107 PE=3 SV=1 46 170 3.0E-13
sp|Q54YD2|Y8295_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0278295 OS=Dictyostelium discoideum GN=DDB_G0278295 PE=2 SV=1 46 170 1.0E-12
sp|Q54SZ8|NPC22_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum GN=DDB_G0282109 PE=3 SV=1 46 168 9.0E-12
sp|Q55BL4|NPC21_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum GN=DDB_G0270454 PE=3 SV=1 46 172 1.0E-08
sp|Q54KP7|NPC23_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum GN=DDB_G0287185 PE=3 SV=1 46 172 2.0E-08
sp|Q54MV4|Y8563_DICDI Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0285639 OS=Dictyostelium discoideum GN=DDB_G0285639 PE=3 SV=1 46 170 5.0E-07
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|084040
MRVSSALPFILASFVACATANPFGHQIPLSASGSDDTVTTFAGWGYENCGSPTDLVQIESIAISPDPPQPGKDLT
VTVNGIATDVVQAGAYADVTVKLGLIKLLKKEFDVCEEAHNANLTIQCPVQPGSYEVRHTVALPKEIPPAKYKVE
VEGYTADDDPLLCLKLTVDFMKRPF*
Coding >AgabiH97|084040
ATGCGCGTCTCCTCTGCCCTCCCTTTTATCCTCGCTTCATTTGTTGCTTGTGCAACAGCAAACCCTTTCGGGCAC
CAGATTCCTCTTTCTGCATCCGGTTCGGATGACACTGTCACCACATTTGCTGGTTGGGGATATGAGAATTGTGGA
AGCCCCACTGATCTTGTCCAAATTGAATCGATTGCCATTTCGCCTGATCCACCCCAACCAGGCAAGGATCTCACA
GTCACGGTGAACGGTATCGCCACGGACGTGGTCCAGGCTGGAGCGTATGCAGACGTCACGGTTAAACTTGGTTTG
ATCAAACTACTCAAGAAAGAATTCGATGTGTGCGAAGAGGCACACAACGCTAACTTAACGATACAATGCCCCGTT
CAACCTGGCTCTTATGAGGTACGGCATACTGTCGCCCTACCAAAAGAGATTCCTCCCGCCAAATACAAGGTAGAA
GTGGAAGGTTACACTGCCGATGATGATCCACTTCTATGCTTGAAGCTTACAGTCGACTTTATGAAGCGCCCGTTC
TGA
Transcript >AgabiH97|084040
ATGCGCGTCTCCTCTGCCCTCCCTTTTATCCTCGCTTCATTTGTTGCTTGTGCAACAGCAAACCCTTTCGGGCAC
CAGATTCCTCTTTCTGCATCCGGTTCGGATGACACTGTCACCACATTTGCTGGTTGGGGATATGAGAATTGTGGA
AGCCCCACTGATCTTGTCCAAATTGAATCGATTGCCATTTCGCCTGATCCACCCCAACCAGGCAAGGATCTCACA
GTCACGGTGAACGGTATCGCCACGGACGTGGTCCAGGCTGGAGCGTATGCAGACGTCACGGTTAAACTTGGTTTG
ATCAAACTACTCAAGAAAGAATTCGATGTGTGCGAAGAGGCACACAACGCTAACTTAACGATACAATGCCCCGTT
CAACCTGGCTCTTATGAGGTACGGCATACTGTCGCCCTACCAAAAGAGATTCCTCCCGCCAAATACAAGGTAGAA
GTGGAAGGTTACACTGCCGATGATGATCCACTTCTATGCTTGAAGCTTACAGTCGACTTTATGAAGCGCCCGTTC
TGA
Gene >AgabiH97|084040
ATGCGCGTCTCCTCTGCCCTCCCTTTTATCCTCGCTTCATTTGTTGCTTGTGCAACAGCAAACCCTTTCGGGCAC
CAGATTCCTCTTTCTGCATCCGGTTCGGATGACACTGTCACCACATTTGCTGGTTGGGGATATGAGAATTGTGGT
GCGTGTTTCCTCAATATTTATTTCGCTCATAGTAACAACTATTATTCTTTTTAGGAAGCCCCACTGATCTTGTCC
AAATTGAATCGATTGCCATTTCGCCTGATCCACCCCAACCAGGCAAGGATCTCACAGTCACGGTGAACGGTATCG
CCACGGACGTGGTCCAGGTACGAGAGCTCCCGCGTGTTGATTTTAGGCTCAATCGTCATGAAATAAGGCTGGAGC
GTATGCAGACGTCACGGTTAAACTTGGTTTGATCAAACTACTCAAGAAAGAATTCGATGTGTGCGAAGAGGCGTA
CGTTCTCGCTCCCATTCACACAATATCCAGTTCTAACTAGCCAAACTCCTCAGACACAACGCTAACTTAACGATA
CAATGCCCCGTTCAACCTGGCTCTTATGAGGTACGGCATACTGTCGCCCTACCAAAAGAGATTCCTCCCGGTGAG
TGTAGCTGGTTCATCGAGCTTTCCATGAATACTTAGCCGCCGCAGCCAAATACAAGGTAGAAGTGGAAGGTTACA
CTGCCGATGATGATCCACTTCTATGCTTGAAGCTTACAGTCGACTTTATGAAGCGCCCGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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