Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|083920
Gene name
Location	scaffold_5:1428627..1429917
Strand	-
Gene length (bp)	1290
Transcript length (bp)	1020
Coding sequence length (bp)	1020
Protein length (aa)	340

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	5.0E-09	10	95
PF05368	NmrA	NmrA-like family	3.4E-07	9	87

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9Y7K4\|YGI2_SCHPO	Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1	5	321	2.0E-15
sp\|Q12177\|YL056_YEAST	Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1	5	319	2.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 41	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|083920 MAKTKVFTTGSTGYIGGSILERLLVHPNAHSFEITTLVRSQNKADKLKKLGVTPVVGSFSDTSLLEDLAAGADAV FDAADADDLEAAKAILRGLRRRHRATGIPSIFIHTSGTGLLSDNAAGLYATDKIWDDADADDLETLPDSAPHRDV DLAIINADNEGYVRTYLVAPSTIYGLATGRLVKAEIANNHSQQVPRLIRTALDRRRAGMVGKGVNIWPNVHIDDI GDLYIALFDAAIADPRTRHGREGYYFGENGEHTLYEVGKHIGRVLVELGKSDIAEPTTFTPKEIDKYFAGSTSLG SNSRCRGNRSRMIGWQPKKTTKDLFASIRPEVDDILRRG*
Coding	>AgabiH97\|083920 ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTA CATCCTAATGCACATTCTTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTG GGCGTGACGCCTGTCGTCGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTG TTCGATGCGGCGGATGCGGATGACTTGGAAGCCGCAAAGGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCT ACCGGGATTCCTTCTATCTTCATTCATACTTCAGGAACAGGTCTTTTATCGGACAATGCTGCAGGTCTCTACGCA ACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAGCGCGCCTCATCGCGATGTC GATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGCCCCATCAACGATTTACGGC CTGGCGACGGGAAGACTGGTCAAAGCCGAGATAGCCAACAATCACTCACAGCAAGTCCCAAGGTTGATTCGCACG GCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAACGTGCATATCGATGATATC GGTGACCTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTAT TTTGGCGAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAA AGTGACATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGGATCAACATCATTAGGT TCCAACTCGAGGTGCAGGGGAAACAGGTCAAGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTT GCGAGTATCAGGCCGGAAGTCGATGATATTTTGAGACGAGGATAG
Transcript	>AgabiH97\|083920 ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTA CATCCTAATGCACATTCTTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTG GGCGTGACGCCTGTCGTCGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTG TTCGATGCGGCGGATGCGGATGACTTGGAAGCCGCAAAGGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCT ACCGGGATTCCTTCTATCTTCATTCATACTTCAGGAACAGGTCTTTTATCGGACAATGCTGCAGGTCTCTACGCA ACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAGCGCGCCTCATCGCGATGTC GATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGCCCCATCAACGATTTACGGC CTGGCGACGGGAAGACTGGTCAAAGCCGAGATAGCCAACAATCACTCACAGCAAGTCCCAAGGTTGATTCGCACG GCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAACGTGCATATCGATGATATC GGTGACCTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTAT TTTGGCGAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAA AGTGACATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGGATCAACATCATTAGGT TCCAACTCGAGGTGCAGGGGAAACAGGTCAAGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTT GCGAGTATCAGGCCGGAAGTCGATGATATTTTGAGACGAGGATAG
Gene	>AgabiH97\|083920 ATGGCCAAAACAAAGGTTTTCACGACCGGATCCACCGGTTAGATCTGTTTGATTCATTCTACGTTCAATGGGGTC AATCTCATTTTGATTGATAGGCTACATCGGAGGATCTATCCTTGAGCGCCTTCTAGTACATCCTAATGCACATTC TTTCGAGATCACAACTCTCGTCCGATCGCAAAACAAAGCGGACAAGTTGAAGAAACTGGGCGTGACGCCTGTCGT CGGCTCATTTAGTGATACTTCGCTACTAGAAGACCTCGCAGCTGGGGCAGATGCAGTGTTCGATGCGGTAGGTTG GTTGGATCTTTGCAAAGATTGATGGCCCTCATAGACGCATATGAAGGCGGATGCGGATGACTTGGAAGCCGCAAA GGCGATATTGCGGGGACTCAGGAGACGTCACCGAGCTACCGGGATTCCTTCTATCTTCATTCATACTGTATGTAT GCCGCCCGCTTTTCAAGTTCATCGATGCACCAGTGTCGAATTTTTTTAGTCAGGAACAGGTCTTTTATCGGACAA TGCTGCAGGTCTCTACGCAACCGACAAAATATGGGATGACGCAGATGCAGATGACCTCGAAACACTGCCTGACAG CGCGCCTCATCGCGATGTCGATCTGGCTATAATCAATGCTGACAATGAAGGCTACGTTAGAACATATCTCGTAGC CCCATCAACGATTTACGGCCTGGCGACGGGAAGACTGGTCAAAGCCGAGATAGCCAACAATCACTCACAGCAAGT CCCAAGGTTGATTCGCACGGCACTCGACAGGCGAAGGGCAGGTATGGTCGGAAAAGGCGTCAACATATGGCCAAA CGTGCATATCGATGATAGTGAGTTGTTCCTTGACAAATGTGCTCAGCAGCTTCAGTGACCTGTTTAGTCGGTGAC CTTTACATTGCCCTGTTCGATGCTGCCATCGCAGATCCACGCACACGTCATGGTCGTGAGGGTTATTATTTTGGC GAGAATGGAGAACATACGTTGTACGAGGTTGGGAAGCACATTGGGCGTGTTCTTGTCGAACTCGGCAAAAGTGAC ATTGCAGAGCCAACGACATTCACTCCAAAAGAAATCGACAAGTACTTTGCGGTGCGTTGTATCTGCCTTACTGTT TTATGATTCGACAATATCACTCCCCAGGGATCAACATCATTAGGTTCCAACTCGAGGTGCAGGGGAAACAGGTCA AGGATGATAGGTTGGCAACCCAAGAAAACCACGAAAGATCTCTTTGCGAGTATCAGGCCGGAAGTCGATGATATT TTGAGACGAGGATAG

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