Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|083480
Gene name
Locationscaffold_5:1311078..1313853
Strand+
Gene length (bp)2775
Transcript length (bp)2283
Coding sequence length (bp)2283
Protein length (aa) 761

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 1.2E-15 49 176

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q8GYB1|NUD15_ARATH Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2 45 238 1.0E-19
sp|Q6D4L1|NUDL_PECAS Uncharacterized Nudix hydrolase NudL OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=nudL PE=3 SV=1 28 164 1.0E-18
sp|O22951|NUD22_ARATH Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2 45 238 2.0E-18
sp|Q8LET2|NUD11_ARATH Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2 49 238 3.0E-18
sp|A1JMC0|NUDL_YERE8 Uncharacterized Nudix hydrolase NudL OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=nudL PE=3 SV=1 64 167 7.0E-15
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q8GYB1|NUD15_ARATH Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2 45 238 1.0E-19
sp|Q6D4L1|NUDL_PECAS Uncharacterized Nudix hydrolase NudL OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=nudL PE=3 SV=1 28 164 1.0E-18
sp|O22951|NUD22_ARATH Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2 45 238 2.0E-18
sp|Q8LET2|NUD11_ARATH Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2 49 238 3.0E-18
sp|A1JMC0|NUDL_YERE8 Uncharacterized Nudix hydrolase NudL OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=nudL PE=3 SV=1 64 167 7.0E-15
sp|B5XQ60|NUDL_KLEP3 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae (strain 342) GN=nudL PE=3 SV=1 28 167 7.0E-15
sp|A6TAY4|NUDL_KLEP7 Uncharacterized Nudix hydrolase NudL OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=nudL PE=3 SV=1 28 167 2.0E-14
sp|Q7N3M0|NUDL_PHOLL Uncharacterized Nudix hydrolase NudL OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=nudL PE=3 SV=1 28 167 2.0E-14
sp|A8AFP5|NUDL_CITK8 Uncharacterized Nudix hydrolase NudL OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nudL PE=3 SV=1 28 167 4.0E-14
sp|A7MKE8|NUDL_CROS8 Uncharacterized Nudix hydrolase NudL OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=nudL PE=3 SV=1 47 167 6.0E-14
sp|P43338|NUDL_ENTAE Uncharacterized Nudix hydrolase NudL (Fragment) OS=Enterobacter aerogenes GN=nudL PE=3 SV=1 28 139 1.0E-13
sp|B4SUL8|NUDL_SALNS Uncharacterized Nudix hydrolase NudL OS=Salmonella newport (strain SL254) GN=nudL PE=3 SV=1 64 168 1.0E-13
sp|B5FTK8|NUDL_SALDC Uncharacterized Nudix hydrolase NudL OS=Salmonella dublin (strain CT_02021853) GN=nudL PE=3 SV=1 64 167 1.0E-13
sp|Q57NI6|NUDL_SALCH Uncharacterized Nudix hydrolase NudL OS=Salmonella choleraesuis (strain SC-B67) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|B5F3R6|NUDL_SALA4 Uncharacterized Nudix hydrolase NudL OS=Salmonella agona (strain SL483) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|B4TKF7|NUDL_SALHS Uncharacterized Nudix hydrolase NudL OS=Salmonella heidelberg (strain SL476) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|Q5PNL9|NUDL_SALPA Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|B5BHD1|NUDL_SALPK Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi A (strain AKU_12601) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|A9MVU1|NUDL_SALPB Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|C0Q309|NUDL_SALPC Uncharacterized Nudix hydrolase NudL OS=Salmonella paratyphi C (strain RKS4594) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|B4TXZ6|NUDL_SALSV Uncharacterized Nudix hydrolase NudL OS=Salmonella schwarzengrund (strain CVM19633) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|P0A2L0|NUDL_SALTI Uncharacterized Nudix hydrolase NudL OS=Salmonella typhi GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|P0A2K9|NUDL_SALTY Uncharacterized Nudix hydrolase NudL OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|B5R2U5|NUDL_SALEP Uncharacterized Nudix hydrolase NudL OS=Salmonella enteritidis PT4 (strain P125109) GN=nudL PE=3 SV=1 64 167 2.0E-13
sp|Q1CH51|NUDL_YERPN Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|A7FJ95|NUDL_YERP3 Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|Q1C8W1|NUDL_YERPA Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|B2K0H0|NUDL_YERPB Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|Q7CHW2|NUDL_YERPE Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|A9R5X2|NUDL_YERPG Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua (strain Angola) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|A4TKD0|NUDL_YERPP Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis (strain Pestoides F) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|Q66BW8|NUDL_YERPS Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|B1JP41|NUDL_YERPY Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nudL PE=3 SV=1 46 167 3.0E-13
sp|A4WBH1|NUDL_ENT38 Uncharacterized Nudix hydrolase NudL OS=Enterobacter sp. (strain 638) GN=nudL PE=3 SV=1 47 167 4.0E-13
sp|P0C024|NUDT7_HUMAN Peroxisomal coenzyme A diphosphatase NUDT7 OS=Homo sapiens GN=NUDT7 PE=2 SV=1 50 243 1.0E-11
sp|Q23236|NDX3_CAEEL Nudix hydrolase 3 OS=Caenorhabditis elegans GN=ndx-3 PE=3 SV=2 50 200 3.0E-11
sp|Q12524|PCD1_YEAST Peroxisomal coenzyme A diphosphatase 1, peroxisomal OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PCD1 PE=1 SV=1 41 184 1.0E-10
sp|Q99P30|NUDT7_MOUSE Peroxisomal coenzyme A diphosphatase NUDT7 OS=Mus musculus GN=Nudt7 PE=1 SV=2 50 171 1.0E-10
sp|Q8WV74|NUDT8_HUMAN Nucleoside diphosphate-linked moiety X motif 8 OS=Homo sapiens GN=NUDT8 PE=1 SV=2 49 170 3.0E-10
sp|Q9CR24|NUDT8_MOUSE Nucleoside diphosphate-linked moiety X motif 8 OS=Mus musculus GN=Nudt8 PE=1 SV=1 16 170 7.0E-10
sp|Q9NA25|NDX8_CAEEL Peroxisomal coenzyme A diphosphatase ndx-8 OS=Caenorhabditis elegans GN=ndx-8 PE=1 SV=1 49 168 1.0E-09
sp|Q83L76|NUDL_SHIFL Uncharacterized Nudix hydrolase NudL OS=Shigella flexneri GN=nudL PE=3 SV=1 28 167 9.0E-09
sp|Q0T506|NUDL_SHIF8 Uncharacterized Nudix hydrolase NudL OS=Shigella flexneri serotype 5b (strain 8401) GN=nudL PE=3 SV=1 28 167 9.0E-09
sp|Q92350|YDH5_SCHPO Probable nudix hydrolase C6G9.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G9.05 PE=3 SV=1 46 106 3.0E-08
sp|Q321V9|NUDL_SHIBS Uncharacterized Nudix hydrolase NudL OS=Shigella boydii serotype 4 (strain Sb227) GN=nudL PE=3 SV=1 47 167 3.0E-08
sp|Q8FGU5|NUDL_ECOL6 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7USI8|NUDL_ECO27 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7MBL9|NUDL_ECO45 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7L6U1|NUDL_ECO55 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain 55989 / EAEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|Q8XCQ2|NUDL_ECO57 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O157:H7 GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B5YQV4|NUDL_ECO5E Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7MVU2|NUDL_ECO81 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O81 (strain ED1a) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7M287|NUDL_ECO8A Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O8 (strain IAI1) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|A8A110|NUDL_ECOHS Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O9:H4 (strain HS) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|A1ABY1|NUDL_ECOK1 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O1:K1 / APEC GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|Q0TH20|NUDL_ECOL5 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B7NBF9|NUDL_ECOLU Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B6IBP0|NUDL_ECOSE Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain SE11) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|Q1RAX9|NUDL_ECOUT Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain UTI89 / UPEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B2U449|NUDL_SHIB3 Uncharacterized Nudix hydrolase NudL OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|Q32FR6|NUDL_SHIDS Uncharacterized Nudix hydrolase NudL OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|B1LD60|NUDL_ECOSM Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=nudL PE=3 SV=1 47 167 4.0E-08
sp|A7ZMT6|NUDL_ECO24 Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=nudL PE=3 SV=1 47 167 5.0E-08
sp|Q3Z2F4|NUDL_SHISS Uncharacterized Nudix hydrolase NudL OS=Shigella sonnei (strain Ss046) GN=nudL PE=3 SV=1 47 167 5.0E-08
sp|B7LPN4|NUDL_ESCF3 Uncharacterized Nudix hydrolase NudL OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nudL PE=3 SV=1 47 167 5.0E-08
sp|B7NSW2|NUDL_ECO7I Uncharacterized Nudix hydrolase NudL OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=nudL PE=3 SV=1 47 167 9.0E-08
sp|P43337|NUDL_ECOLI Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12) GN=nudL PE=3 SV=1 47 167 2.0E-07
sp|B1J0S5|NUDL_ECOLC Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=nudL PE=3 SV=1 47 167 2.0E-07
sp|B1XH80|NUDL_ECODH Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12 / DH10B) GN=nudL PE=3 SV=1 47 167 2.0E-07
sp|C4ZZG9|NUDL_ECOBW Uncharacterized Nudix hydrolase NudL OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=nudL PE=3 SV=1 47 167 2.0E-07
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 35.74 21.35 50.14
Initials Initials knots 60.80 36.43 85.17
Pileal_Stipeal_center Stage I stipe center 23.70 13.84 33.56
Pileal_Stipeal_shell Stage I stipe shell 24.75 14.60 34.91
DIF_stipe_center Stage II stipe center 20.30 11.82 28.78
DIF_stipe_shell Stage II stipe shell 20.64 12.04 29.24
DIF_stipe_skin Stage II stipe skin 21.65 12.67 30.64
DIF_cap_skin Stage II cap skin 17.17 9.85 24.49
DIF_cap_tissue Stage II cap tissue 20.45 11.70 29.19
DIF_gill_tissue Stage II gill tissue 28.63 17.02 40.24
YFB_stipe_center Young fruiting body stipe center 19.11 11.01 27.21
YFB_stipe_shell Young fruiting body stipe shell 22.73 13.34 32.12
YFB_stipe_skin Young fruiting body stipe skin 23.03 13.52 32.54
YFB_cap_skin Young fruiting body cap skin 16.80 9.60 23.99
YFB_cap_tissue Young fruiting body cap tissue 17.64 10.12 25.16
YFB_gill_tissue Young fruiting body gill tissue 23.87 14.06 33.69
YFB_veil Young fruiting body veil 31.58 18.79 44.37

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.540688 no
Casing YFB_stipe_center 0.021846 yes
Casing YFB_stipe_shell 0.112721 no
Casing YFB_stipe_skin 0.134571 no
Casing YFB_cap_skin 0.004548 yes
Casing YFB_cap_tissue 0.007439 yes
Casing YFB_gill_tissue 0.169066 no
Casing YFB_veil 0.778124 no
Casing Initials 0.049882 yes
Casing Pileal_Stipeal_center 0.172307 no
Casing Pileal_Stipeal_shell 0.225264 no
Casing DIF_stipe_center 0.040058 yes
Casing DIF_stipe_shell 0.049257 yes
Casing DIF_stipe_skin 0.073226 no
Casing DIF_cap_skin 0.006032 yes
Casing DIF_cap_tissue 0.044418 yes
DIF_gill_tissue YFB_stipe_center 0.187178 no
DIF_gill_tissue YFB_stipe_shell 0.521563 no
DIF_gill_tissue YFB_stipe_skin 0.555212 no
DIF_gill_tissue YFB_cap_skin 0.053965 no
DIF_gill_tissue YFB_cap_tissue 0.087080 no
DIF_gill_tissue YFB_gill_tissue 0.640673 no
DIF_gill_tissue YFB_veil 0.835784 no
YFB_stipe_center YFB_stipe_shell 0.678313 no
YFB_stipe_center YFB_stipe_skin 0.647809 no
YFB_stipe_center YFB_cap_skin 0.784425 no
YFB_stipe_center YFB_cap_tissue 0.877905 no
YFB_stipe_center YFB_gill_tissue 0.555552 no
YFB_stipe_center YFB_veil 0.079305 no
YFB_stipe_shell YFB_stipe_skin 0.981395 no
YFB_stipe_shell YFB_cap_skin 0.374329 no
YFB_stipe_shell YFB_cap_tissue 0.485998 no
YFB_stipe_shell YFB_gill_tissue 0.927505 no
YFB_stipe_shell YFB_veil 0.301356 no
YFB_stipe_skin YFB_cap_skin 0.344404 no
YFB_stipe_skin YFB_cap_tissue 0.455776 no
YFB_stipe_skin YFB_gill_tissue 0.949175 no
YFB_stipe_skin YFB_veil 0.328438 no
YFB_cap_skin YFB_cap_tissue 0.929584 no
YFB_cap_skin YFB_gill_tissue 0.263104 no
YFB_cap_skin YFB_veil 0.021846 yes
YFB_cap_tissue YFB_gill_tissue 0.365965 no
YFB_cap_tissue YFB_veil 0.031800 yes
YFB_gill_tissue YFB_veil 0.399688 no
Initials DIF_gill_tissue 0.003765 yes
Initials YFB_stipe_center 0.000613 yes
Initials YFB_stipe_shell 0.000613 yes
Initials YFB_stipe_skin 0.000613 yes
Initials YFB_cap_skin 0.000613 yes
Initials YFB_cap_tissue 0.000613 yes
Initials YFB_gill_tissue 0.000613 yes
Initials YFB_veil 0.011350 yes
Initials Pileal_Stipeal_center 0.000613 yes
Initials Pileal_Stipeal_shell 0.000613 yes
Initials DIF_stipe_center 0.000613 yes
Initials DIF_stipe_shell 0.000613 yes
Initials DIF_stipe_skin 0.000613 yes
Initials DIF_cap_skin 0.000613 yes
Initials DIF_cap_tissue 0.000613 yes
Pileal_Stipeal_center DIF_gill_tissue 0.623015 no
Pileal_Stipeal_center YFB_stipe_center 0.576104 no
Pileal_Stipeal_center YFB_stipe_shell 0.937842 no
Pileal_Stipeal_center YFB_stipe_skin 0.959900 no
Pileal_Stipeal_center YFB_cap_skin 0.286315 no
Pileal_Stipeal_center YFB_cap_tissue 0.384577 no
Pileal_Stipeal_center YFB_gill_tissue 0.988956 no
Pileal_Stipeal_center YFB_veil 0.387205 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.934091 no
Pileal_Stipeal_center DIF_stipe_center 0.713268 no
Pileal_Stipeal_center DIF_stipe_shell 0.753234 no
Pileal_Stipeal_center DIF_stipe_skin 0.855487 no
Pileal_Stipeal_center DIF_cap_skin 0.331262 no
Pileal_Stipeal_center DIF_cap_tissue 0.734225 no
Pileal_Stipeal_shell DIF_gill_tissue 0.729605 no
Pileal_Stipeal_shell YFB_stipe_center 0.468628 no
Pileal_Stipeal_shell YFB_stipe_shell 0.860516 no
Pileal_Stipeal_shell YFB_stipe_skin 0.885330 no
Pileal_Stipeal_shell YFB_cap_skin 0.197823 no
Pileal_Stipeal_shell YFB_cap_tissue 0.288589 no
Pileal_Stipeal_shell YFB_gill_tissue 0.947574 no
Pileal_Stipeal_shell YFB_veil 0.488685 no
Pileal_Stipeal_shell DIF_stipe_center 0.610469 no
Pileal_Stipeal_shell DIF_stipe_shell 0.648601 no
Pileal_Stipeal_shell DIF_stipe_skin 0.761216 no
Pileal_Stipeal_shell DIF_cap_skin 0.238427 no
Pileal_Stipeal_shell DIF_cap_tissue 0.632388 no
DIF_stipe_center DIF_gill_tissue 0.271845 no
DIF_stipe_center YFB_stipe_center 0.907075 no
DIF_stipe_center YFB_stipe_shell 0.803810 no
DIF_stipe_center YFB_stipe_skin 0.777537 no
DIF_stipe_center YFB_cap_skin 0.637102 no
DIF_stipe_center YFB_cap_tissue 0.752525 no
DIF_stipe_center YFB_gill_tissue 0.694010 no
DIF_stipe_center YFB_veil 0.122022 no
DIF_stipe_center DIF_stipe_shell 0.976714 no
DIF_stipe_center DIF_stipe_skin 0.898874 no
DIF_stipe_center DIF_cap_skin 0.688634 no
DIF_stipe_center DIF_cap_tissue 0.989235 no
DIF_stipe_shell DIF_gill_tissue 0.303175 no
DIF_stipe_shell YFB_stipe_center 0.879378 no
DIF_stipe_shell YFB_stipe_shell 0.839876 no
DIF_stipe_shell YFB_stipe_skin 0.814582 no
DIF_stipe_shell YFB_cap_skin 0.597707 no
DIF_stipe_shell YFB_cap_tissue 0.714955 no
DIF_stipe_shell YFB_gill_tissue 0.733000 no
DIF_stipe_shell YFB_veil 0.143758 no
DIF_stipe_shell DIF_stipe_skin 0.929519 no
DIF_stipe_shell DIF_cap_skin 0.648347 no
DIF_stipe_shell DIF_cap_tissue 0.986331 no
DIF_stipe_skin DIF_gill_tissue 0.410084 no
DIF_stipe_skin YFB_stipe_center 0.785227 no
DIF_stipe_skin YFB_stipe_shell 0.927152 no
DIF_stipe_skin YFB_stipe_skin 0.906176 no
DIF_stipe_skin YFB_cap_skin 0.479928 no
DIF_stipe_skin YFB_cap_tissue 0.600572 no
DIF_stipe_skin YFB_gill_tissue 0.836065 no
DIF_stipe_skin YFB_veil 0.217423 no
DIF_stipe_skin DIF_cap_skin 0.535021 no
DIF_stipe_skin DIF_cap_tissue 0.915681 no
DIF_cap_skin DIF_gill_tissue 0.069197 no
DIF_cap_skin YFB_stipe_center 0.825685 no
DIF_cap_skin YFB_stipe_shell 0.417039 no
DIF_cap_skin YFB_stipe_skin 0.386259 no
DIF_cap_skin YFB_cap_skin 0.968919 no
DIF_cap_skin YFB_cap_tissue 0.962119 no
DIF_cap_skin YFB_gill_tissue 0.300496 no
DIF_cap_skin YFB_veil 0.024698 yes
DIF_cap_skin DIF_cap_tissue 0.675935 no
DIF_cap_tissue DIF_gill_tissue 0.293376 no
DIF_cap_tissue YFB_stipe_center 0.899376 no
DIF_cap_tissue YFB_stipe_shell 0.824078 no
DIF_cap_tissue YFB_stipe_skin 0.797075 no
DIF_cap_tissue YFB_cap_skin 0.625451 no
DIF_cap_tissue YFB_cap_tissue 0.740039 no
DIF_cap_tissue YFB_gill_tissue 0.714283 no
DIF_cap_tissue YFB_veil 0.140421 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|083480
MNSVKVPTISQEILRGLSVESKAPIERLADFLANTHLPDLTPYPRSRLAAVLVLLYEEEGALRVLLTTRSKALRT
HAGQTALPGGRVDEGDKTFVETALREAYEEVQLPLGSLDIHVLGVHEPFLSLHKLLVTPVFALLTRNDLLGELKP
SEEEVSKIFSHPLEAVLDPQLSEHEANLATLGSEDWPYATTYYNTSDSQVVMLGNTTYRMHRFRTSASPIKGLTS
DILIKAAQIAYGRETVYERKHKAMERENRSCWQSRRHQGNIRHQSYRVLPPTTEAGDIGAAPCRARQLPHYPTAS
SQLSSRHFNMHSQPSDLPLWEYKPIFGLIHSLGVCSVCTAYASHVATSINQADASIIKAMKTGHEHQDIFFMDGF
GEGLRHKSSSTAEVTHLKEELNTTKHAFEDCVAENELLRSELDQVKLKLFHIKEESRQIRHSLLSQSSPIPSLSP
PSLSSSHGTRSPGSSIGSSLELQRNINEDMNRPQSKQLMAPLTTEQEGTFSHPARQLSTTYASVVSDVPQIPHTY
NITSQPSPNATPSISRTSNAQPLSRNHPYIKYPRTMKELKDLMDLAHEQTAEGVAALSIVKSVCSRAHGTPRESK
SFMQRWVLMNWKNPYAATTASATSMGAKANPRIDDSVDVWFDYLCTHPHSWPKGVRKDAIGRPVMSDLIANRAVA
RMRPTESAAMRNDFISHVTDMFAVPGMYQHLLERNNFTVASEVTYNTFSGIVTPDTIAQHFADSGFMPEDAEHNF
EPWAKYYKKC*
Coding >AgabiH97|083480
ATGAATAGCGTGAAAGTTCCAACAATCTCTCAAGAAATATTGCGTGGCCTCTCGGTCGAATCGAAAGCTCCAATC
GAACGGCTGGCTGATTTTCTCGCAAATACACACTTACCTGATCTGACACCTTATCCCAGGAGTCGGCTAGCAGCA
GTTCTTGTACTCTTGTATGAAGAAGAAGGAGCACTCCGCGTTTTACTAACTACCCGGTCAAAGGCATTGAGAACC
CATGCCGGACAAACCGCTCTTCCAGGCGGTAGGGTTGACGAAGGAGATAAGACGTTCGTAGAGACTGCGCTTCGC
GAGGCATACGAAGAAGTGCAGCTGCCTTTGGGTAGCTTGGACATACACGTGTTGGGCGTCCACGAGCCATTTTTA
TCATTGCACAAGCTGCTGGTCACACCTGTCTTTGCCCTATTGACTCGGAATGACTTGCTGGGCGAACTCAAACCA
TCGGAGGAAGAAGTCTCCAAGATCTTTAGTCACCCACTCGAAGCGGTTCTGGATCCGCAACTCTCTGAACACGAG
GCGAACCTTGCAACGTTGGGGAGTGAAGACTGGCCATATGCAACAACCTATTATAACACGAGCGATTCTCAGGTT
GTAATGCTCGGCAACACAACGTACAGAATGCATCGATTCCGAACAAGCGCCTCCCCGATCAAAGGTCTAACGTCA
GATATACTGATTAAGGCAGCCCAGATTGCATATGGGAGAGAGACCGTGTATGAACGAAAGCATAAAGCGATGGAA
CGTGAGAATCGAAGTTGTTGGCAATCGCGGAGACATCAGGGAAACATCAGACATCAGTCCTACAGAGTTCTCCCA
CCGACTACTGAGGCTGGTGATATTGGAGCAGCGCCTTGCCGCGCCCGACAGCTTCCCCATTATCCGACGGCCTCG
TCTCAGCTTTCCTCCCGACATTTCAATATGCATTCTCAACCCAGCGACCTTCCTCTATGGGAATATAAGCCTATC
TTCGGCCTCATTCACTCACTTGGTGTTTGCTCAGTCTGCACGGCATATGCCAGTCATGTGGCGACGTCTATTAAT
CAAGCTGACGCTTCTATCATCAAAGCGATGAAGACTGGACACGAGCATCAGGATATTTTTTTCATGGATGGTTTC
GGCGAAGGCTTGCGCCACAAGAGTTCAAGCACTGCGGAGGTGACCCACTTGAAGGAAGAGCTCAATACTACAAAA
CATGCCTTTGAGGATTGTGTGGCCGAAAACGAATTACTGCGCTCCGAGCTTGACCAAGTCAAGCTGAAACTCTTT
CACATAAAAGAAGAGTCCAGACAGATCAGGCACTCCTTGCTCAGTCAAAGCAGTCCTATTCCATCCCTTTCTCCG
CCTTCCCTTTCCAGCTCCCATGGCACGCGGAGCCCCGGTTCTTCAATTGGCTCGTCATTGGAATTGCAACGAAAT
ATTAATGAAGACATGAATCGCCCCCAGTCGAAACAGCTTATGGCACCTTTGACTACCGAGCAAGAAGGCACATTT
TCTCATCCCGCACGACAACTTTCAACGACCTATGCGTCCGTGGTCTCTGATGTCCCCCAAATCCCTCATACTTAC
AACATTACATCTCAACCCTCACCCAATGCGACTCCGTCTATATCCAGGACTTCCAACGCTCAGCCTCTTTCCCGC
AATCATCCTTATATCAAGTATCCCAGGACGATGAAGGAATTAAAGGATTTGATGGACCTTGCACACGAACAGACG
GCGGAAGGCGTTGCTGCGTTATCTATCGTGAAGAGTGTATGTTCTCGTGCCCATGGAACACCTCGGGAAAGCAAG
TCTTTCATGCAAAGGTGGGTACTCATGAACTGGAAGAACCCCTACGCGGCTACTACTGCGTCTGCGACCTCTATG
GGAGCCAAAGCAAACCCTCGTATTGACGATTCTGTGGATGTGTGGTTCGATTATCTCTGCACTCATCCTCATTCA
TGGCCAAAGGGTGTTCGCAAGGATGCCATTGGTCGACCTGTCATGTCTGATCTCATCGCTAATCGTGCTGTGGCC
CGGATGAGACCCACGGAATCTGCGGCGATGAGGAATGATTTCATCTCTCATGTTACAGACATGTTTGCGGTTCCT
GGAATGTACCAACATCTCTTAGAGAGGAACAACTTTACGGTCGCTAGCGAAGTTACTTACAACACATTTTCTGGG
ATCGTCACCCCTGATACGATTGCCCAGCATTTTGCTGATTCTGGGTTCATGCCCGAGGATGCTGAACATAACTTT
GAACCATGGGCCAAGTATTACAAAAAATGTTGA
Transcript >AgabiH97|083480
ATGAATAGCGTGAAAGTTCCAACAATCTCTCAAGAAATATTGCGTGGCCTCTCGGTCGAATCGAAAGCTCCAATC
GAACGGCTGGCTGATTTTCTCGCAAATACACACTTACCTGATCTGACACCTTATCCCAGGAGTCGGCTAGCAGCA
GTTCTTGTACTCTTGTATGAAGAAGAAGGAGCACTCCGCGTTTTACTAACTACCCGGTCAAAGGCATTGAGAACC
CATGCCGGACAAACCGCTCTTCCAGGCGGTAGGGTTGACGAAGGAGATAAGACGTTCGTAGAGACTGCGCTTCGC
GAGGCATACGAAGAAGTGCAGCTGCCTTTGGGTAGCTTGGACATACACGTGTTGGGCGTCCACGAGCCATTTTTA
TCATTGCACAAGCTGCTGGTCACACCTGTCTTTGCCCTATTGACTCGGAATGACTTGCTGGGCGAACTCAAACCA
TCGGAGGAAGAAGTCTCCAAGATCTTTAGTCACCCACTCGAAGCGGTTCTGGATCCGCAACTCTCTGAACACGAG
GCGAACCTTGCAACGTTGGGGAGTGAAGACTGGCCATATGCAACAACCTATTATAACACGAGCGATTCTCAGGTT
GTAATGCTCGGCAACACAACGTACAGAATGCATCGATTCCGAACAAGCGCCTCCCCGATCAAAGGTCTAACGTCA
GATATACTGATTAAGGCAGCCCAGATTGCATATGGGAGAGAGACCGTGTATGAACGAAAGCATAAAGCGATGGAA
CGTGAGAATCGAAGTTGTTGGCAATCGCGGAGACATCAGGGAAACATCAGACATCAGTCCTACAGAGTTCTCCCA
CCGACTACTGAGGCTGGTGATATTGGAGCAGCGCCTTGCCGCGCCCGACAGCTTCCCCATTATCCGACGGCCTCG
TCTCAGCTTTCCTCCCGACATTTCAATATGCATTCTCAACCCAGCGACCTTCCTCTATGGGAATATAAGCCTATC
TTCGGCCTCATTCACTCACTTGGTGTTTGCTCAGTCTGCACGGCATATGCCAGTCATGTGGCGACGTCTATTAAT
CAAGCTGACGCTTCTATCATCAAAGCGATGAAGACTGGACACGAGCATCAGGATATTTTTTTCATGGATGGTTTC
GGCGAAGGCTTGCGCCACAAGAGTTCAAGCACTGCGGAGGTGACCCACTTGAAGGAAGAGCTCAATACTACAAAA
CATGCCTTTGAGGATTGTGTGGCCGAAAACGAATTACTGCGCTCCGAGCTTGACCAAGTCAAGCTGAAACTCTTT
CACATAAAAGAAGAGTCCAGACAGATCAGGCACTCCTTGCTCAGTCAAAGCAGTCCTATTCCATCCCTTTCTCCG
CCTTCCCTTTCCAGCTCCCATGGCACGCGGAGCCCCGGTTCTTCAATTGGCTCGTCATTGGAATTGCAACGAAAT
ATTAATGAAGACATGAATCGCCCCCAGTCGAAACAGCTTATGGCACCTTTGACTACCGAGCAAGAAGGCACATTT
TCTCATCCCGCACGACAACTTTCAACGACCTATGCGTCCGTGGTCTCTGATGTCCCCCAAATCCCTCATACTTAC
AACATTACATCTCAACCCTCACCCAATGCGACTCCGTCTATATCCAGGACTTCCAACGCTCAGCCTCTTTCCCGC
AATCATCCTTATATCAAGTATCCCAGGACGATGAAGGAATTAAAGGATTTGATGGACCTTGCACACGAACAGACG
GCGGAAGGCGTTGCTGCGTTATCTATCGTGAAGAGTGTATGTTCTCGTGCCCATGGAACACCTCGGGAAAGCAAG
TCTTTCATGCAAAGGTGGGTACTCATGAACTGGAAGAACCCCTACGCGGCTACTACTGCGTCTGCGACCTCTATG
GGAGCCAAAGCAAACCCTCGTATTGACGATTCTGTGGATGTGTGGTTCGATTATCTCTGCACTCATCCTCATTCA
TGGCCAAAGGGTGTTCGCAAGGATGCCATTGGTCGACCTGTCATGTCTGATCTCATCGCTAATCGTGCTGTGGCC
CGGATGAGACCCACGGAATCTGCGGCGATGAGGAATGATTTCATCTCTCATGTTACAGACATGTTTGCGGTTCCT
GGAATGTACCAACATCTCTTAGAGAGGAACAACTTTACGGTCGCTAGCGAAGTTACTTACAACACATTTTCTGGG
ATCGTCACCCCTGATACGATTGCCCAGCATTTTGCTGATTCTGGGTTCATGCCCGAGGATGCTGAACATAACTTT
GAACCATGGGCCAAGTATTACAAAAAATGTTGA
Gene >AgabiH97|083480
ATGAATAGCGTGAAAGTTCCAACAATCTCTCAAGAAATATTGCGTGGCCTCTCGGTCGAATCGAAAGCTCCAATC
GAACGGCTGGCTGATTTTCTCGCAAATACACACTTACCTGATCTGTCCGTTAGTTGTCTTACAACTCATTTGTTT
CATTCACATGACGTGATCTACTCATAGGACACCTTATCCCAGGAGTCGGCTAGCAGCAGTTCTTGTACTCTTGTA
TGAAGAAGAAGGAGCACTCCGCGTTTTACTAACTACCCGGTCAAAGGCATTGAGAACCCATGCCGGACAAACCGC
TCTTCCAGGCGGTAGGGTTGACGAAGGAGATAAGACGTTCGTAGAGACTGCGGTAGGTTATGTATGCCTTCTTTA
TGCCAAAAAAATGATGTTAAATCATATCGTCATATATCTAAAGCTTCGCGAGGCATACGAAGAAGTGCAGCTGCC
TTTGGGTAGCTTGGACATACACGTGTTGGGCGTCCACGAGCCATTTTTATCATTGCACAAGCTGCTGGTCACACC
TGTCTTTGCCCTATTGACTCGGAATGACTTGCTGGGCGAACTCAAACCATCGGAGGAAGAAGTCTCCAAGATCTT
TAGTCACCCACTCGAAGCGGTTCTGGATCCGCAACTCTCTGAACACGAGGCGAACCTTGCAACGTTGGGGAGTGA
AGACTGGCCATATGCAACAACCTATTATGTATGTTCACGAGCCGCAATCACTTCTAAGGTGAACTCATTCTTGAG
CTTCAGAACACGAGCGATTCTCAGGTTGTAATGCTCGGCAACACAACGTACAGAATGCATCGATTCCGAACAAGC
GCCTCCCCGATCAAAGGTCTAACGTCAGATATACTGGTAAGATTGTTAACACGTTCTGAACTGTACAAAGTCGTG
ATATACACTAAAAACAGATTAAGGCAGCCCAGATTGCATATGGGAGAGAGACCGTGTATGAACGGTTTGCGCCGG
GACAAATATGGGGATTCGAAGCGATTATGATGGCGTCACAAAATTAGAAAGTGTGTAGTGCATTCGGTGGCAGTC
GGAAAAAATGTTTAACAGAATGTTTAAGGCATAAAGCGATGGAACGTGAGAATCGAAGTTGTTGGCAATCGCGGA
GACATCAGGGAAACATCAGACATCAGGCAACCCTTTTGTGTTATAAAATCATGATAGCATTGATAATTCGGCAGC
TTTGTTCTCTCCCACTTTCCCCCGCCACAATTGTTACCTCTCCCCCTTCTCCCCTCCGCCATGCCCTTCAATCCC
TTCGATATCGATTCTCCCCCCCAGTCCTACAGAGTTCTCCCACCGACTACTGAGGCTGGTGATATTGGAGCAGCG
CCTTGCCGCGCCCGACAGCTTCCCCATTATCCGACGGCCTCGTCTCAGCTTTCCTCCCGACATTTCAATATGCAT
TCTCAACCCAGCGACCTTCCTCTATGGGAATATAAGCCTATCTTCGGCCTCATTCACTCACTTGGTGTTTGCTCA
GTCTGCACGGCATATGCCAGTCATGTGGCGACGTCTATTAATCAAGCTGACGCTTCTATCATCAAAGCGATGAAG
ACTGGACACGAGCATCAGGATATTTTTTTCATGGATGGTTTCGGCGAAGGCTTGCGCCACAAGAGTTCAAGCACT
GCGGAGGTGACCCACTTGAAGGAAGAGCTCAATACTACAAAACATGCCTTTGAGGATTGTGTGGCCGAAAACGAA
TTACTGCGCTCCGAGCTTGACCAAGTCAAGCTGAAACTCTTTCACATAAAAGAAGAGTCCAGACAGATCAGGCAC
TCCTTGCTCAGTCAAAGCAGTCCTATTCCATCCCTTTCTCCGCCTTCCCTTTCCAGCTCCCATGGCACGCGGAGC
CCCGGTTCTTCAATTGGCTCGTCATTGGAATTGCAACGAAATATTAATGAAGACATGAATCGCCCCCAGTCGAAA
CAGCTTATGGCACCTTTGACTACCGAGCAAGAAGGCACATTTTCTCATCCCGCACGACAACTTTCAACGACCTAT
GCGTCCGTGGTCTCTGATGTCCCCCAAATCCCTCATACTTACAACATTACATCTCAACCCTCACCCAATGCGACT
CCGTCTATATCCAGGACTTCCAACGCTCAGCCTCTTTCCCGCAATCATCCTTATATCAAGTATCCCAGGACGATG
AAGGAATTAAAGGATTTGATGGACCTTGCACACGAACAGACGGCGGAAGGCGTTGCTGCGTTATCTATCGTGAAG
AGTGTATGTTCTCGTGCCCATGGAACACCTCGGGAAAGCAAGTCTTTCATGCAAAGGTGGGTACTCATGAACTGG
AAGAACCCCTACGCGGCTACTACTGCGTCTGCGACCTCTATGGGAGCCAAAGCAAACCCTCGTATTGACGATTCT
GTGGATGTGTGGTTCGATTATCTCTGCACTCATCCTCATTCATGGCCAAAGGGTGTTCGCAAGGATGCCATTGGT
CGACCTGTCATGTCTGATCTCATCGCTAATCGTGCTGTGGCCCGGATGAGACCCACGGAATCTGCGGCGATGAGG
AATGATTTCATCTCTCATGTTACAGACATGTTTGCGGTTCCTGGAATGTACCAACATCTCTTAGAGAGGAACAAC
TTTACGGTCGCTAGCGAAGTTACTTACAACACATTTTCTGGGATCGTCACCCCTGATACGATTGCCCAGCATTTT
GCTGATTCTGGGTTCATGCCCGAGGATGCTGAACATAACTTTGAACCATGGGCCAAGTATTACAAAAAATGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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