Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|082810
Gene name
Location	scaffold_5:1151438..1152509
Strand	+
Gene length (bp)	1071
Transcript length (bp)	777
Coding sequence length (bp)	777
Protein length (aa)	259

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10277	Frag1	Frag1/DRAM/Sfk1 family	1.8E-41	25	234

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P35735\|SFK1_YEAST	Protein SFK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SFK1 PE=1 SV=1	21	222	1.0E-17
sp\|Q9Y7U1\|SFK1_SCHPO	Protein sfk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sfk1 PE=3 SV=1	28	233	5.0E-14

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 51	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	22	44	22
2	74	93	19
3	113	135	22
4	146	168	22
5	181	203	22
6	213	231	18

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|082810 MNRAQSRQSSLRSSNVHPHRHWLYVWVPLFGAIVWFGMLWAMLIVWLALGKPQYVTQEGSIAYISDIGASSLKPL FIAGCSITAACFFFSLILERFFRHTGRLVAYVRRRERILSIFAIIGSFIGGLGLILLSIFDTGRFTSAHRAFLLV FIVGVALSAIFTILEFYFLSRDFAELRELRFAYIMKAVIALTLICLAIAFGITLYRDKDAGAVLEWLIAFGFTFY LLTFFYDLRLSKGIPDGELTSEKLRGGQHSSLP*
Coding	>AgabiH97\|082810 ATGAATAGGGCCCAGTCCAGACAAAGCAGTCTTCGTTCCTCAAACGTACATCCTCATAGACACTGGCTATATGTC TGGGTACCTCTTTTCGGAGCAATCGTGTGGTTTGGCATGCTTTGGGCCATGCTTATTGTATGGCTGGCTCTTGGA AAACCGCAATATGTAACGCAAGAAGGATCTATCGCTTACATATCCGATATCGGTGCCAGTTCTTTGAAACCTTTA TTCATCGCCGGGTGCTCCATAACGGCTGCATGTTTTTTCTTTTCTCTTATCCTGGAAAGGTTTTTCCGACATACT GGACGTCTGGTTGCATACGTACGCCGGCGAGAAAGAATACTTAGTATCTTTGCAATAATTGGATCGTTTATTGGT GGACTTGGACTTATTCTCCTTTCCATTTTTGATACTGGCCGTTTCACGAGTGCGCACCGAGCGTTTCTCTTGGTA TTCATAGTTGGCGTGGCTTTGAGTGCTATTTTCACCATCCTCGAATTTTACTTTTTATCCAGAGATTTCGCCGAG CTTCGAGAACTACGATTCGCATACATAATGAAGGCAGTTATTGCTCTAACACTTATCTGTCTGGCTATCGCCTTT GGGATCACGCTGTATCGTGACAAGGACGCTGGAGCTGTCTTGGAATGGCTCATCGCATTTGGCTTTACGTTTTAC CTGTTGACTTTCTTCTATGACCTACGCCTTTCGAAGGGGATCCCCGATGGAGAACTTACAAGCGAAAAATTACGG GGGGGACAACATTCCTCTTTACCTTAG
Transcript	>AgabiH97\|082810 ATGAATAGGGCCCAGTCCAGACAAAGCAGTCTTCGTTCCTCAAACGTACATCCTCATAGACACTGGCTATATGTC TGGGTACCTCTTTTCGGAGCAATCGTGTGGTTTGGCATGCTTTGGGCCATGCTTATTGTATGGCTGGCTCTTGGA AAACCGCAATATGTAACGCAAGAAGGATCTATCGCTTACATATCCGATATCGGTGCCAGTTCTTTGAAACCTTTA TTCATCGCCGGGTGCTCCATAACGGCTGCATGTTTTTTCTTTTCTCTTATCCTGGAAAGGTTTTTCCGACATACT GGACGTCTGGTTGCATACGTACGCCGGCGAGAAAGAATACTTAGTATCTTTGCAATAATTGGATCGTTTATTGGT GGACTTGGACTTATTCTCCTTTCCATTTTTGATACTGGCCGTTTCACGAGTGCGCACCGAGCGTTTCTCTTGGTA TTCATAGTTGGCGTGGCTTTGAGTGCTATTTTCACCATCCTCGAATTTTACTTTTTATCCAGAGATTTCGCCGAG CTTCGAGAACTACGATTCGCATACATAATGAAGGCAGTTATTGCTCTAACACTTATCTGTCTGGCTATCGCCTTT GGGATCACGCTGTATCGTGACAAGGACGCTGGAGCTGTCTTGGAATGGCTCATCGCATTTGGCTTTACGTTTTAC CTGTTGACTTTCTTCTATGACCTACGCCTTTCGAAGGGGATCCCCGATGGAGAACTTACAAGCGAAAAATTACGG GGGGGACAACATTCCTCTTTACCTTAG
Gene	>AgabiH97\|082810 ATGAATAGGTTTAACATGTTTGCCGCGTTTTAGACGAAATGTATTCACCTCCTACATGAACCCTTTCGCTTCCAG GGCCCAGTCCAGACAAAGCAGTCTTCGTTCCTCAAACGTACATCCTCATAGACACTGGCTATATGTCTGGGTACC TCTTTTCGGAGCAATCGTGTGGTTTGGTTCGTTAACCAGTCTTTCGGAGTCTCAATACCAATAACATGAATTTCG CATGAAGGCATGCTTTGGGCCATGCTTATTGTATGGCTGGCTCTTGGAAAACCGCAATATGTAACGCAAGAAGGA TCTATCGCTTACATATCCGATATCGGTGCCAGTTCTTTGAAACCTTTATTCATCGCCGGGTGCTCCATAACGGCT GCATGTTTTTTCTTTTCTCTTATCCTGGAAAGGTTTTTCCGACATACTGGACGGTGATTAATTTCCTGTCTGTCG TCTGTGGCCTCTTATTCACTCTAAAAAATATCGCACAGTCTGGTTGCATACGTACGCCGGCGAGAAAGAATACTT AGTATCTTTGCAATAATTGGATCGTTTATTGGTGGACTTGGACTTATTCTCCTTTCCATTTTTGATACTGGCCGT TTCACGAGTGCGCACCGAGCGTTTCTCTTGGTATTCATAGTTGGCGTGGCTTTGAGTGCTATTTTCACCATCCTC GAAGTGCGTTAATACAATCAATTGTGTCCGGGATACATTTTTTGCTGACCTTTTCTAGTTTTACTTTTTATCCAG AGATTTCGCCGAGCTTCGAGAACTACGATTCGCATACATAATGAAGGCAGTTATTGCTCTAACACTTATCTGTCT GGCTATCGCCTTTGGGATCACGCTGTATCGTGACAAGGACGCTGGAGGTAACACTTTTCATCTTTTCCCTTCTCA TCGGTTTATTGACAAATCATCATCGTAGCTGTCTTGGAATGGCTCATCGCATTTGGCTTTACGTTTTACCTGTTG ACTTTCTTCTATGACCTACGCCTTTCGAAGGGGATCCCCGATGGAGAACTTACAAGCGAAAAATTACGGGGGGGA CAACATTCCTCTTTACCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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