Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|082680
Gene name
Locationscaffold_5:1122393..1123590
Strand-
Gene length (bp)1197
Transcript length (bp)1137
Coding sequence length (bp)1137
Protein length (aa) 379

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 161 183 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|082680
MKLQPPLVWPCLLLLVLASAASADSPRGILDPPTDSPATPTDKTTSATTSATESTSTTTQATVSTPTTTTTQETT
TAQENTSTTPTTTQEQTTSQQQTTTTPPPETTPVPGASPPATSVITDGDVIITTTLPVENTSTGSAAPATTSQSS
DDDSDSGLSTGSIIGMSVAAGVAVLGIIGFFVWKFTRKRFSDFDDNEAIKWPELNTHAGNDGINNSAQNVGRAGI
DTGSEANLSRIESTSNYSTPDFGSGAHDPYAVPPLPHLNPNQPYRDDPSPAHGFYDPYRGPVPGTIESGTSDWQP
EAYPMTQLGGAPGRASPAPDFHGGMYGRASPAPQVAYGGRASPGPQAAYGGRASPGPQAVYGRTSPGPQAAYTTG
PGY*
Coding >AgabiH97|082680
ATGAAGCTCCAGCCTCCGCTCGTTTGGCCATGCCTTCTCCTCCTCGTACTCGCCTCTGCTGCCTCTGCTGACTCG
CCTCGCGGCATACTAGACCCCCCCACTGACTCGCCCGCGACGCCCACGGACAAAACCACCTCAGCTACCACCTCA
GCTACGGAGTCAACATCAACTACTACCCAAGCCACCGTTAGCACGCCGACAACCACCACCACACAAGAAACAACG
ACCGCGCAAGAAAACACTAGTACAACACCGACAACGACACAAGAACAGACAACGTCGCAACAACAGACAACTACT
ACCCCTCCGCCAGAAACCACCCCCGTACCGGGTGCATCCCCTCCTGCCACCAGTGTTATCACAGATGGAGACGTC
ATTATAACCACCACATTACCCGTTGAGAACACTTCGACCGGCTCCGCAGCGCCTGCTACCACAAGTCAGTCATCT
GACGACGATAGTGATAGTGGTTTGTCCACTGGCTCCATCATCGGTATGTCAGTTGCTGCAGGCGTTGCTGTCCTC
GGCATCATCGGTTTCTTTGTCTGGAAGTTCACTAGGAAGAGGTTTTCCGACTTTGACGACAACGAAGCCATCAAA
TGGCCAGAACTCAACACACACGCTGGAAATGACGGTATCAATAACTCTGCTCAAAATGTGGGCCGCGCTGGCATC
GACACTGGTTCAGAAGCAAACTTGTCACGGATTGAGTCTACTTCCAACTACTCCACGCCAGATTTTGGCTCGGGT
GCCCATGATCCCTATGCTGTGCCTCCCTTGCCCCATCTCAATCCCAATCAGCCATATAGGGACGACCCTTCACCG
GCTCACGGGTTTTATGATCCCTATCGTGGTCCGGTTCCCGGCACCATTGAAAGTGGAACTTCAGATTGGCAACCT
GAAGCGTATCCTATGACACAGCTGGGTGGAGCACCAGGTCGGGCAAGTCCTGCTCCTGATTTCCACGGCGGTATG
TATGGAAGGGCGTCGCCTGCGCCGCAGGTGGCTTACGGAGGCAGAGCCTCCCCTGGTCCGCAGGCGGCATATGGA
GGACGGGCATCTCCTGGTCCGCAGGCAGTATACGGGCGAACGTCTCCTGGTCCACAAGCAGCATACACAACAGGG
CCAGGGTATTGA
Transcript >AgabiH97|082680
ATGAAGCTCCAGCCTCCGCTCGTTTGGCCATGCCTTCTCCTCCTCGTACTCGCCTCTGCTGCCTCTGCTGACTCG
CCTCGCGGCATACTAGACCCCCCCACTGACTCGCCCGCGACGCCCACGGACAAAACCACCTCAGCTACCACCTCA
GCTACGGAGTCAACATCAACTACTACCCAAGCCACCGTTAGCACGCCGACAACCACCACCACACAAGAAACAACG
ACCGCGCAAGAAAACACTAGTACAACACCGACAACGACACAAGAACAGACAACGTCGCAACAACAGACAACTACT
ACCCCTCCGCCAGAAACCACCCCCGTACCGGGTGCATCCCCTCCTGCCACCAGTGTTATCACAGATGGAGACGTC
ATTATAACCACCACATTACCCGTTGAGAACACTTCGACCGGCTCCGCAGCGCCTGCTACCACAAGTCAGTCATCT
GACGACGATAGTGATAGTGGTTTGTCCACTGGCTCCATCATCGGTATGTCAGTTGCTGCAGGCGTTGCTGTCCTC
GGCATCATCGGTTTCTTTGTCTGGAAGTTCACTAGGAAGAGGTTTTCCGACTTTGACGACAACGAAGCCATCAAA
TGGCCAGAACTCAACACACACGCTGGAAATGACGGTATCAATAACTCTGCTCAAAATGTGGGCCGCGCTGGCATC
GACACTGGTTCAGAAGCAAACTTGTCACGGATTGAGTCTACTTCCAACTACTCCACGCCAGATTTTGGCTCGGGT
GCCCATGATCCCTATGCTGTGCCTCCCTTGCCCCATCTCAATCCCAATCAGCCATATAGGGACGACCCTTCACCG
GCTCACGGGTTTTATGATCCCTATCGTGGTCCGGTTCCCGGCACCATTGAAAGTGGAACTTCAGATTGGCAACCT
GAAGCGTATCCTATGACACAGCTGGGTGGAGCACCAGGTCGGGCAAGTCCTGCTCCTGATTTCCACGGCGGTATG
TATGGAAGGGCGTCGCCTGCGCCGCAGGTGGCTTACGGAGGCAGAGCCTCCCCTGGTCCGCAGGCGGCATATGGA
GGACGGGCATCTCCTGGTCCGCAGGCAGTATACGGGCGAACGTCTCCTGGTCCACAAGCAGCATACACAACAGGG
CCAGGGTATTGA
Gene >AgabiH97|082680
ATGAAGCTCCAGCCTCCGCTCGTTTGGCCATGCCTTCTCCTCCTCGTACTCGCCTCTGCTGCCTCTGCTGACTCG
CCTCGCGGCATACTAGACCCCCCCACTGACTCGCCCGCGACGCCCACGGACAAAACCACCTCAGCTACCACCTCA
GCTACGGAGTCAACATCAACTACTACCCAAGCCACCGTTAGCACGCCGACAACCACCACCACACAAGAAACAACG
ACCGCGCAAGAAAACACTAGTACAACACCGACAACGACACAAGAACAGACAACGTCGCAACAACAGACAACTACT
ACCCCTCCGCCAGAAACCACCCCCGTACCGGGTGCATCCCCTCCTGCCACCAGTGTTATCACAGATGGAGACGTC
ATTATAACCACCACATTACCCGTTGAGAACACTTCGACCGGCTCCGCAGCGCCTGCTACCACAAGTCAGTCATCT
GACGACGATAGTGATAGTGGTTTGTCCACTGGCTCCATCATCGGTATGTCAGTTGCTGCAGGCGTTGCTGTCCTC
GGCATCATCGGTTTCTTTGTCTGGAAGTTCACTAGGAAGAGGTTTTCCGACTTTGACGACAGTAAGCATCCCTGT
TTGTCTATGTGTGCCGGCCAAATTTACCCACAATGTGACCGCCCAGACGAAGCCATCAAATGGCCAGAACTCAAC
ACACACGCTGGAAATGACGGTATCAATAACTCTGCTCAAAATGTGGGCCGCGCTGGCATCGACACTGGTTCAGAA
GCAAACTTGTCACGGATTGAGTCTACTTCCAACTACTCCACGCCAGATTTTGGCTCGGGTGCCCATGATCCCTAT
GCTGTGCCTCCCTTGCCCCATCTCAATCCCAATCAGCCATATAGGGACGACCCTTCACCGGCTCACGGGTTTTAT
GATCCCTATCGTGGTCCGGTTCCCGGCACCATTGAAAGTGGAACTTCAGATTGGCAACCTGAAGCGTATCCTATG
ACACAGCTGGGTGGAGCACCAGGTCGGGCAAGTCCTGCTCCTGATTTCCACGGCGGTATGTATGGAAGGGCGTCG
CCTGCGCCGCAGGTGGCTTACGGAGGCAGAGCCTCCCCTGGTCCGCAGGCGGCATATGGAGGACGGGCATCTCCT
GGTCCGCAGGCAGTATACGGGCGAACGTCTCCTGGTCCACAAGCAGCATACACAACAGGGCCAGGGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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