Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|082620
Gene name
Location	scaffold_5:1113275..1113969
Strand	-
Gene length (bp)	694
Transcript length (bp)	579
Coding sequence length (bp)	579
Protein length (aa)	193

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|082620 MIVFRLFFSLCFSFLVYAQTQTIVDEAGQSVVVVGTLDPAGLPVTQTIETLPAGGVVDPNTNTLTTTADPAAAAT TTPTTTVTPPGQGPVDEPAATTGTPFGPTPFTYTTEIDGVTTAVLDTFSPTDIATTPFTPTASGTVWEYSDWLSS FGGSQATAAAAAGSRNAGHRLGATDAVVMMMTTCLFSVFHLL*
Coding	>AgabiH97\|082620 ATGATTGTTTTCCGTCTCTTCTTCTCCCTTTGTTTTTCTTTCCTAGTCTATGCACAGACACAGACGATAGTTGAT GAGGCAGGTCAATCCGTGGTCGTAGTCGGAACTTTAGATCCTGCGGGTCTCCCCGTAACCCAGACAATTGAAACC CTGCCTGCAGGAGGGGTGGTAGACCCAAACACGAACACCCTCACAACTACAGCGGACCCTGCAGCAGCTGCAACG ACTACCCCTACAACTACAGTAACACCTCCTGGACAAGGGCCGGTAGATGAGCCTGCTGCAACCACCGGGACGCCT TTCGGTCCTACTCCCTTCACTTACACGACTGAAATCGACGGTGTCACTACTGCAGTTCTTGACACCTTCAGCCCT ACTGATATCGCAACCACCCCGTTTACTCCAACTGCAAGTGGCACTGTCTGGGAATATAGTGACTGGCTCAGCAGT TTTGGTGGATCTCAAGCCACGGCTGCTGCTGCTGCTGGTAGTCGCAATGCGGGACATAGACTAGGCGCTACGGAC GCTGTTGTGATGATGATGACGACCTGCTTGTTTTCAGTTTTCCACTTGCTGTGA
Transcript	>AgabiH97\|082620 ATGATTGTTTTCCGTCTCTTCTTCTCCCTTTGTTTTTCTTTCCTAGTCTATGCACAGACACAGACGATAGTTGAT GAGGCAGGTCAATCCGTGGTCGTAGTCGGAACTTTAGATCCTGCGGGTCTCCCCGTAACCCAGACAATTGAAACC CTGCCTGCAGGAGGGGTGGTAGACCCAAACACGAACACCCTCACAACTACAGCGGACCCTGCAGCAGCTGCAACG ACTACCCCTACAACTACAGTAACACCTCCTGGACAAGGGCCGGTAGATGAGCCTGCTGCAACCACCGGGACGCCT TTCGGTCCTACTCCCTTCACTTACACGACTGAAATCGACGGTGTCACTACTGCAGTTCTTGACACCTTCAGCCCT ACTGATATCGCAACCACCCCGTTTACTCCAACTGCAAGTGGCACTGTCTGGGAATATAGTGACTGGCTCAGCAGT TTTGGTGGATCTCAAGCCACGGCTGCTGCTGCTGCTGGTAGTCGCAATGCGGGACATAGACTAGGCGCTACGGAC GCTGTTGTGATGATGATGACGACCTGCTTGTTTTCAGTTTTCCACTTGCTGTGA
Gene	>AgabiH97\|082620 ATGATTGTTTTCCGTCTCTTCTTCTCCCTTTGTTTTTCTTTCCTAGTCTATGCACAGACACAGACGATAGTTGAT GAGTACGATCCGTCTTTGTAATAAAGTTGTCTTTCTCCTTTTTCATGCTCTTTTCCATCCAGGGCAGGTCAATCC GTGGTCGTAGTCGGAACTTTAGATCCTGCGGGTCTCCCCGTAACCCAGACAATGTAAATAGTATTTTTCGTCCTC CTAAGTGCCACTATTGACTCGATTCGATGCCAGTGAAACCCTGCCTGCAGGAGGGGTGGTAGACCCAAACACGAA CACCCTCACAACTACAGCGGACCCTGCAGCAGCTGCAACGACTACCCCTACAACTACAGTAACACCTCCTGGACA AGGGCCGGTAGATGAGCCTGCTGCAACCACCGGGACGCCTTTCGGTCCTACTCCCTTCACTTACACGACTGAAAT CGACGGTGTCACTACTGCAGTTCTTGACACCTTCAGCCCTACTGATATCGCAACCACCCCGTTTACTCCAACTGC AAGTGGCACTGTCTGGGAATATAGTGACTGGCTCAGCAGTTTTGGTGGATCTCAAGCCACGGCTGCTGCTGCTGC TGGTAGTCGCAATGCGGGACATAGACTAGGCGCTACGGACGCTGTTGTGATGATGATGACGACCTGCTTGTTTTC AGTTTTCCACTTGCTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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