© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|080900 |
| Gene name | |
| Location | scaffold_5:732529..733452 |
| Strand | - |
| Gene length (bp) | 923 |
| Transcript length (bp) | 702 |
| Coding sequence length (bp) | 702 |
| Protein length (aa) | 234 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13847 | Methyltransf_31 | Methyltransferase domain | 4.3E-17 | 59 | 194 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 3.6E-06 | 62 | 126 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9D853|MET10_MOUSE | Protein-lysine N-methyltransferase Mettl10 OS=Mus musculus GN=Mettl10 PE=1 SV=1 | 4 | 231 | 1.0E-48 |
| sp|Q9P7Z3|EFM4_SCHPO | Protein-lysine N-methyltransferase efm4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=see1 PE=2 SV=1 | 5 | 230 | 2.0E-47 |
| sp|Q5D013|MET10_DANRE | Protein-lysine N-methyltransferase mettl10 OS=Danio rerio GN=mettl10 PE=2 SV=1 | 4 | 231 | 1.0E-46 |
| sp|P40516|EFM4_YEAST | Protein-lysine N-methyltransferase EFM4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EFM4 PE=1 SV=1 | 2 | 232 | 1.0E-42 |
| sp|Q5JPI9|MET10_HUMAN | Protein-lysine N-methyltransferase METTL10 OS=Homo sapiens GN=METTL10 PE=1 SV=2 | 7 | 196 | 5.0E-40 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 12.30 | 5.54 | 19.06 |
| Initials | Initials knots | 12.19 | 5.48 | 18.90 |
| Pileal_Stipeal_center | Stage I stipe center | 14.97 | 6.88 | 23.06 |
| Pileal_Stipeal_shell | Stage I stipe shell | 12.85 | 5.83 | 19.87 |
| DIF_stipe_center | Stage II stipe center | 13.08 | 5.94 | 20.21 |
| DIF_stipe_shell | Stage II stipe shell | 11.76 | 5.27 | 18.26 |
| DIF_stipe_skin | Stage II stipe skin | 14.06 | 6.45 | 21.67 |
| DIF_cap_skin | Stage II cap skin | 12.58 | 5.69 | 19.47 |
| DIF_cap_tissue | Stage II cap tissue | 12.20 | 5.49 | 18.90 |
| DIF_gill_tissue | Stage II gill tissue | 15.50 | 7.14 | 23.85 |
| YFB_stipe_center | Young fruiting body stipe center | 12.76 | 5.66 | 19.86 |
| YFB_stipe_shell | Young fruiting body stipe shell | 12.78 | 5.75 | 19.81 |
| YFB_stipe_skin | Young fruiting body stipe skin | 13.58 | 6.21 | 20.95 |
| YFB_cap_skin | Young fruiting body cap skin | 10.67 | 4.60 | 16.74 |
| YFB_cap_tissue | Young fruiting body cap tissue | 9.14 | 3.91 | 14.37 |
| YFB_gill_tissue | Young fruiting body gill tissue | 10.62 | 4.69 | 16.56 |
| YFB_veil | Young fruiting body veil | 13.11 | 5.98 | 20.24 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.668346 | no |
| Casing | YFB_stipe_center | 0.959828 | no |
| Casing | YFB_stipe_shell | 0.958884 | no |
| Casing | YFB_stipe_skin | 0.884928 | no |
| Casing | YFB_cap_skin | 0.823572 | no |
| Casing | YFB_cap_tissue | 0.562299 | no |
| Casing | YFB_gill_tissue | 0.812589 | no |
| Casing | YFB_veil | 0.928823 | no |
| Casing | Initials | 0.989125 | no |
| Casing | Pileal_Stipeal_center | 0.731633 | no |
| Casing | Pileal_Stipeal_shell | 0.954167 | no |
| Casing | DIF_stipe_center | 0.932422 | no |
| Casing | DIF_stipe_shell | 0.952225 | no |
| Casing | DIF_stipe_skin | 0.833958 | no |
| Casing | DIF_cap_skin | 0.974902 | no |
| Casing | DIF_cap_tissue | 0.990320 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.730698 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.736372 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.839294 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.428091 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.204693 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.404825 | no |
| DIF_gill_tissue | YFB_veil | 0.782541 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.998185 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.933503 | no |
| YFB_stipe_center | YFB_cap_skin | 0.769092 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.493095 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.754772 | no |
| YFB_stipe_center | YFB_veil | 0.971611 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.932721 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.765593 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.490480 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.750883 | no |
| YFB_stipe_shell | YFB_veil | 0.971907 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.662540 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.386972 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.643654 | no |
| YFB_stipe_skin | YFB_veil | 0.961943 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.812824 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.994620 | no |
| YFB_cap_skin | YFB_veil | 0.724325 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.812745 | no |
| YFB_cap_tissue | YFB_veil | 0.447983 | no |
| YFB_gill_tissue | YFB_veil | 0.703575 | no |
| Initials | DIF_gill_tissue | 0.649129 | no |
| Initials | YFB_stipe_center | 0.949401 | no |
| Initials | YFB_stipe_shell | 0.948241 | no |
| Initials | YFB_stipe_skin | 0.873302 | no |
| Initials | YFB_cap_skin | 0.837237 | no |
| Initials | YFB_cap_tissue | 0.577040 | no |
| Initials | YFB_gill_tissue | 0.826513 | no |
| Initials | YFB_veil | 0.917413 | no |
| Initials | Pileal_Stipeal_center | 0.715722 | no |
| Initials | Pileal_Stipeal_shell | 0.942173 | no |
| Initials | DIF_stipe_center | 0.921121 | no |
| Initials | DIF_stipe_shell | 0.960905 | no |
| Initials | DIF_stipe_skin | 0.819501 | no |
| Initials | DIF_cap_skin | 0.964290 | no |
| Initials | DIF_cap_tissue | 0.997593 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.963506 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.790349 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.794518 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.886479 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.488180 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.249200 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.466733 | no |
| Pileal_Stipeal_center | YFB_veil | 0.836309 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.803744 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.831905 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.653374 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.930920 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.771544 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.718377 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.747497 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.992055 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.994143 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.941497 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.759871 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.483701 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.745048 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.979366 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.981640 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.901429 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.898618 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.977412 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.944518 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.773385 | no |
| DIF_stipe_center | YFB_stipe_center | 0.972114 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.974631 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.959464 | no |
| DIF_stipe_center | YFB_cap_skin | 0.724980 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.450128 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.708863 | no |
| DIF_stipe_center | YFB_veil | 0.997529 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.876013 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.919001 | no |
| DIF_stipe_center | DIF_cap_skin | 0.956892 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.921438 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.584441 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.904995 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.904268 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.820475 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.887128 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.641435 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.879110 | no |
| DIF_stipe_shell | YFB_veil | 0.870089 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.762188 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.923811 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.961647 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.885942 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.884457 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.888263 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.963248 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.600572 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.334887 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.578662 | no |
| DIF_stipe_skin | YFB_veil | 0.922461 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.867132 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.824551 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.709071 | no |
| DIF_cap_skin | YFB_stipe_center | 0.983831 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.982846 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.915511 | no |
| DIF_cap_skin | YFB_cap_skin | 0.790385 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.524948 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.776677 | no |
| DIF_cap_skin | YFB_veil | 0.955207 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.966897 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.646360 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.950827 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.949856 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.872951 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.834446 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.573540 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.823481 | no |
| DIF_cap_tissue | YFB_veil | 0.918949 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|080900 MTTELQPSKLGTKEHWDKVYSEELTNFEEIGDEGEIWFGEESIEKMVDWCLMHVPSLSNPAVLEVGSGNGALLFA LAEAGYSQKLLIGIDYSDDAVKLSTKISATRNATEIMFSVCDFLREDPSLPSSPEHSNAPSCWDLVLDKGTYDAI ALGSKDPSGRSPAGAYPHRLCRLLKPGGLFLITSCNFTEEELKSSFITEETGLQYHSRIQHPTFSFGGRSGSIVS SVAFKKPL* |
| Coding | >AgabiH97|080900 ATGACTACGGAGCTACAGCCTTCAAAGCTTGGCACAAAGGAGCACTGGGACAAAGTCTACTCTGAAGAACTTACT AATTTCGAAGAGATCGGTGATGAGGGCGAAATTTGGTTTGGTGAAGAGTCAATTGAGAAGATGGTCGACTGGTGC CTCATGCATGTGCCTTCCTTATCGAACCCAGCCGTTCTGGAAGTGGGTAGTGGAAACGGAGCCCTGCTATTTGCG CTTGCAGAAGCTGGTTATTCTCAGAAGCTTCTGATTGGAATCGACTACAGTGACGATGCCGTCAAGTTATCCACA AAAATTTCAGCAACCCGTAACGCGACAGAAATCATGTTCAGCGTATGCGATTTCCTGCGAGAAGACCCGAGCCTT CCATCGAGCCCAGAACACAGCAATGCACCAAGCTGTTGGGACCTCGTCCTGGATAAAGGCACATATGATGCTATC GCTTTGGGCTCAAAAGACCCAAGTGGAAGGTCTCCCGCAGGAGCTTATCCACACCGGCTTTGCCGGCTGCTCAAG CCTGGAGGACTCTTTCTCATCACTTCTTGTAATTTCACGGAGGAAGAGTTGAAGAGCAGCTTCATTACCGAGGAG ACCGGACTTCAATATCATTCTCGTATTCAGCATCCAACATTTAGTTTTGGCGGCCGGTCCGGTAGTATCGTTTCT AGTGTCGCATTCAAAAAACCACTGTGA |
| Transcript | >AgabiH97|080900 ATGACTACGGAGCTACAGCCTTCAAAGCTTGGCACAAAGGAGCACTGGGACAAAGTCTACTCTGAAGAACTTACT AATTTCGAAGAGATCGGTGATGAGGGCGAAATTTGGTTTGGTGAAGAGTCAATTGAGAAGATGGTCGACTGGTGC CTCATGCATGTGCCTTCCTTATCGAACCCAGCCGTTCTGGAAGTGGGTAGTGGAAACGGAGCCCTGCTATTTGCG CTTGCAGAAGCTGGTTATTCTCAGAAGCTTCTGATTGGAATCGACTACAGTGACGATGCCGTCAAGTTATCCACA AAAATTTCAGCAACCCGTAACGCGACAGAAATCATGTTCAGCGTATGCGATTTCCTGCGAGAAGACCCGAGCCTT CCATCGAGCCCAGAACACAGCAATGCACCAAGCTGTTGGGACCTCGTCCTGGATAAAGGCACATATGATGCTATC GCTTTGGGCTCAAAAGACCCAAGTGGAAGGTCTCCCGCAGGAGCTTATCCACACCGGCTTTGCCGGCTGCTCAAG CCTGGAGGACTCTTTCTCATCACTTCTTGTAATTTCACGGAGGAAGAGTTGAAGAGCAGCTTCATTACCGAGGAG ACCGGACTTCAATATCATTCTCGTATTCAGCATCCAACATTTAGTTTTGGCGGCCGGTCCGGTAGTATCGTTTCT AGTGTCGCATTCAAAAAACCACTGTGA |
| Gene | >AgabiH97|080900 ATGACTACGGAGCTACAGCCTTCAAAGCTTGGCACAAAGGAGCAGTATGTGTTTGAAGTGTAAAGCTTTCACCCA TACTCTCAAGCTATCAACAGCTGGGACAAAGTCTACTCTGAAGAACTTACTAATTTCGAAGAGATCGGTGATGAG GGCGAAATTTGGTTCGCCACTCTCCATTCCTTATCGGCTACCGATCTCAAAACTCATGGCGACTAGGTTTGGTGA AGAGTCAATTGAGAAGATGGTCGACTGGTGCCTCATGCATGTGCCTTCCTTATCGAACCCAGCCGTTCTGGAAGT GGGTAGTGGAAACGGAGCCCTGCTATTTGCGCTTGCAGAAGCTGGTTATTCTCAGAAGCTTCTGATTGGAATCGA CTACAGTGACGATGCCGTCAAGTTATCCACAAAAATTTCAGCAACCCGTAACGCGACAGAAATCATGTTCAGCGT ATGCGATTTCCTGCGAGAAGACCCGAGCCTTCCATCGAGCCCAGAACACAGCAATGCACCAAGCTGTTGGGACCT CGTCCTGGATAAAGGCACATATGATGCTATCGCTTTGGGCTCAAAAGACCCAAGTGGAAGGTCTCCCGCAGGAGC TTATCCACACCGGCTTTGCCGGCTGCTCAAGCCTGGAGGACTCTTTCTCATCACTTGTACGAGTAAATGCCCTAA ACAACCTGCAGATGCCCTAACTCGTGATGCGCAGCTTGTAATTTCACGGAGGAAGAGTTGAAGAGCAGCTTCATT ACCGAGGAGACCGGACTTCAATATCAGTCAGTCGCGCCGTACCCATTGCCACTATCACATCCTTGAAAACTGACC ACTATCATATTAGTTCTCGTATTCAGCATCCAACATTTAGTTTTGGCGGCCGGTCCGGTAGTATCGTTTCTAGTG TCGCATTCAAAAAACCACTGTGA |