Protein ID | AgabiH97|080500 |
Gene name | |
Location | scaffold_5:615251..616692 |
Strand | - |
Gene length (bp) | 1441 |
Transcript length (bp) | 1227 |
Coding sequence length (bp) | 1227 |
Protein length (aa) | 409 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01328 | Peroxidase_2 | Peroxidase, family 2 | 2.3E-50 | 104 | 317 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|B9W4V6|APO1_AGRAE | Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 | 49 | 408 | 1.0E-152 |
sp|B9W4V8|APO1_COPRA | Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 | 84 | 316 | 6.0E-97 |
sp|Q00668|STCC_EMENI | Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 | 106 | 290 | 1.0E-17 |
sp|P04963|PRXC_LEPFU | Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 | 100 | 254 | 5.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004601 | peroxidase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0016491 | oxidoreductase activity | No |
GO:0016209 | antioxidant activity | No |
GO:0003824 | catalytic activity | No |
GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 58 | 0.5 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 35.86 | 20.18 | 51.53 |
Initials | Initials knots | 44.92 | 26.20 | 63.64 |
Pileal_Stipeal_center | Stage I stipe center | 69.86 | 41.67 | 98.05 |
Pileal_Stipeal_shell | Stage I stipe shell | 68.02 | 40.53 | 95.51 |
DIF_stipe_center | Stage II stipe center | 76.52 | 45.80 | 107.23 |
DIF_stipe_shell | Stage II stipe shell | 61.49 | 36.51 | 86.47 |
DIF_stipe_skin | Stage II stipe skin | 50.78 | 29.72 | 71.84 |
DIF_cap_skin | Stage II cap skin | 63.59 | 37.84 | 89.34 |
DIF_cap_tissue | Stage II cap tissue | 49.87 | 29.19 | 70.55 |
DIF_gill_tissue | Stage II gill tissue | 60.75 | 35.95 | 85.55 |
YFB_stipe_center | Young fruiting body stipe center | 52.32 | 30.58 | 74.07 |
YFB_stipe_shell | Young fruiting body stipe shell | 49.58 | 29.04 | 70.12 |
YFB_stipe_skin | Young fruiting body stipe skin | 46.55 | 27.18 | 65.93 |
YFB_cap_skin | Young fruiting body cap skin | 49.77 | 29.13 | 70.41 |
YFB_cap_tissue | Young fruiting body cap tissue | 50.56 | 29.63 | 71.49 |
YFB_gill_tissue | Young fruiting body gill tissue | 92.59 | 53.88 | 131.30 |
YFB_veil | Young fruiting body veil | 60.30 | 34.29 | 86.31 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.063183 | no |
Casing | YFB_stipe_center | 0.246090 | no |
Casing | YFB_stipe_shell | 0.344759 | no |
Casing | YFB_stipe_skin | 0.479328 | no |
Casing | YFB_cap_skin | 0.329316 | no |
Casing | YFB_cap_tissue | 0.306438 | no |
Casing | YFB_gill_tissue | 0.000613 | yes |
Casing | YFB_veil | 0.079123 | no |
Casing | Initials | 0.555495 | no |
Casing | Pileal_Stipeal_center | 0.013186 | yes |
Casing | Pileal_Stipeal_shell | 0.018344 | yes |
Casing | DIF_stipe_center | 0.002951 | yes |
Casing | DIF_stipe_shell | 0.056958 | no |
Casing | DIF_stipe_skin | 0.297401 | no |
Casing | DIF_cap_skin | 0.042909 | yes |
Casing | DIF_cap_tissue | 0.330998 | no |
DIF_gill_tissue | YFB_stipe_center | 0.723416 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.597870 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.437591 | no |
DIF_gill_tissue | YFB_cap_skin | 0.597521 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.643186 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.147277 | no |
DIF_gill_tissue | YFB_veil | 0.988684 | no |
YFB_stipe_center | YFB_stipe_shell | 0.919996 | no |
YFB_stipe_center | YFB_stipe_skin | 0.801376 | no |
YFB_stipe_center | YFB_cap_skin | 0.926036 | no |
YFB_stipe_center | YFB_cap_tissue | 0.951666 | no |
YFB_stipe_center | YFB_gill_tissue | 0.034837 | yes |
YFB_stipe_center | YFB_veil | 0.751936 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.905624 | no |
YFB_stipe_shell | YFB_cap_skin | 0.993937 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.972063 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.021846 | yes |
YFB_stipe_shell | YFB_veil | 0.622121 | no |
YFB_stipe_skin | YFB_cap_skin | 0.896477 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.868224 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.007782 | yes |
YFB_stipe_skin | YFB_veil | 0.473191 | no |
YFB_cap_skin | YFB_cap_tissue | 0.977900 | no |
YFB_cap_skin | YFB_gill_tissue | 0.022892 | yes |
YFB_cap_skin | YFB_veil | 0.633925 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.028437 | yes |
YFB_cap_tissue | YFB_veil | 0.675756 | no |
YFB_gill_tissue | YFB_veil | 0.158092 | no |
Initials | DIF_gill_tissue | 0.356456 | no |
Initials | YFB_stipe_center | 0.721106 | no |
Initials | YFB_stipe_shell | 0.841810 | no |
Initials | YFB_stipe_skin | 0.949735 | no |
Initials | YFB_cap_skin | 0.830349 | no |
Initials | YFB_cap_tissue | 0.799092 | no |
Initials | YFB_gill_tissue | 0.005302 | yes |
Initials | YFB_veil | 0.395048 | no |
Initials | Pileal_Stipeal_center | 0.130677 | no |
Initials | Pileal_Stipeal_shell | 0.163299 | no |
Initials | DIF_stipe_center | 0.050706 | no |
Initials | DIF_stipe_shell | 0.338956 | no |
Initials | DIF_stipe_skin | 0.789105 | no |
Initials | DIF_cap_skin | 0.267165 | no |
Initials | DIF_cap_tissue | 0.825505 | no |
Pileal_Stipeal_center | DIF_gill_tissue | 0.743606 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.389156 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.273347 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.173970 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.275734 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.316230 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.400147 | no |
Pileal_Stipeal_center | YFB_veil | 0.737832 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.960307 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.848865 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.774402 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.328972 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.845884 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.284249 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.801346 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.452554 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.329136 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.215281 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.328972 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.367909 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.339657 | no |
Pileal_Stipeal_shell | YFB_veil | 0.793873 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.789600 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.830966 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.381485 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.894834 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.337682 | no |
DIF_stipe_center | DIF_gill_tissue | 0.510283 | no |
DIF_stipe_center | YFB_stipe_center | 0.205425 | no |
DIF_stipe_center | YFB_stipe_shell | 0.128378 | no |
DIF_stipe_center | YFB_stipe_skin | 0.073043 | no |
DIF_stipe_center | YFB_cap_skin | 0.129827 | no |
DIF_stipe_center | YFB_cap_tissue | 0.158500 | no |
DIF_stipe_center | YFB_gill_tissue | 0.614483 | no |
DIF_stipe_center | YFB_veil | 0.511364 | no |
DIF_stipe_center | DIF_stipe_shell | 0.541657 | no |
DIF_stipe_center | DIF_stipe_skin | 0.165549 | no |
DIF_stipe_center | DIF_cap_skin | 0.626833 | no |
DIF_stipe_center | DIF_cap_tissue | 0.138282 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.982208 | no |
DIF_stipe_shell | YFB_stipe_center | 0.699679 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.574190 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.420068 | no |
DIF_stipe_shell | YFB_cap_skin | 0.575547 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.619061 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.167365 | no |
DIF_stipe_shell | YFB_veil | 0.972240 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.630037 | no |
DIF_stipe_shell | DIF_cap_skin | 0.952086 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.583742 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.654950 | no |
DIF_stipe_skin | YFB_stipe_center | 0.959660 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.967560 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.864259 | no |
DIF_stipe_skin | YFB_cap_skin | 0.972045 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.993593 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.026710 | yes |
DIF_stipe_skin | YFB_veil | 0.685154 | no |
DIF_stipe_skin | DIF_cap_skin | 0.546690 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.974859 | no |
DIF_cap_skin | DIF_gill_tissue | 0.931642 | no |
DIF_cap_skin | YFB_stipe_center | 0.621622 | no |
DIF_cap_skin | YFB_stipe_shell | 0.492252 | no |
DIF_cap_skin | YFB_stipe_skin | 0.349136 | no |
DIF_cap_skin | YFB_cap_skin | 0.495432 | no |
DIF_cap_skin | YFB_cap_tissue | 0.536197 | no |
DIF_cap_skin | YFB_gill_tissue | 0.216874 | no |
DIF_cap_skin | YFB_veil | 0.922233 | no |
DIF_cap_skin | DIF_cap_tissue | 0.503004 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.606904 | no |
DIF_cap_tissue | YFB_stipe_center | 0.932566 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.990991 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.896195 | no |
DIF_cap_tissue | YFB_cap_skin | 0.996420 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.980154 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.022631 | yes |
DIF_cap_tissue | YFB_veil | 0.640318 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|080500 MISSLDSLFKATPWFSNANIPPLLLKIPVALLPAKLLMNPFLKLAVLALVTAPLAGAFPSHRSLGGLSSEQLDRI FPTLKVAPPEGPPPPQDDTSTRLVDDADHPFMPAGPNDMRGPCPGLNTLASHGYLPRNGIATPAQVINATMQGFN MEFSLAKFVTYAAFLVDGNPITNLMSIGGKSDLTGEDPPDPATVGGLNTHAVFEGDASMTRADAFFGDNHSFNQT LWDGFVDFSNRFGAGKYNLTVATELRIQRIQDSIATNPQFSFVSPRFITAYAESTFPINFFIDGRQQDGQLDLDA AISFFRDMRYPSGFFRAPKPMGVEGIETIIAAHPIPAGANNGAVNTYTPDPHSGDFNSFCTVYTNFVNETIRGLY PSPTGILKDSLNRNLDFLHDFVSGCPQIFPWGR* |
Coding | >AgabiH97|080500 ATGATTAGCTCGCTAGACAGCTTGTTTAAAGCTACGCCATGGTTCTCAAACGCAAACATCCCCCCGTTACTTCTC AAGATCCCTGTGGCGCTTCTCCCTGCGAAACTATTGATGAATCCCTTTCTCAAACTTGCTGTGCTAGCCTTGGTA ACTGCACCATTAGCAGGGGCCTTCCCGTCCCATCGCTCCCTTGGTGGCCTCTCTTCAGAACAATTGGATAGAATT TTTCCAACGCTCAAGGTAGCTCCTCCGGAAGGTCCTCCGCCGCCTCAGGACGATACGTCGACCAGATTGGTTGAT GACGCTGATCATCCATTTATGCCGGCGGGTCCGAATGACATGCGTGGGCCTTGCCCTGGACTCAATACCCTTGCA TCCCACGGGTACCTGCCCCGGAATGGAATTGCAACTCCCGCTCAAGTCATCAATGCTACAATGCAAGGTTTCAAC ATGGAGTTCTCCCTTGCAAAGTTTGTCACATACGCCGCATTCCTGGTAGATGGCAATCCCATTACCAACTTGATG AGTATCGGAGGAAAAAGCGACCTCACTGGTGAAGACCCTCCCGACCCTGCAACGGTCGGTGGTTTGAACACACAC GCTGTATTCGAAGGTGATGCCAGCATGACCCGGGCCGATGCGTTCTTTGGGGATAACCACAGCTTTAATCAAACA TTGTGGGATGGGTTTGTCGACTTCAGTAACCGATTTGGTGCCGGGAAATACAACCTAACGGTGGCCACTGAACTT CGGATCCAAAGAATCCAGGACTCAATCGCAACAAACCCACAATTCTCATTCGTTTCTCCCCGTTTCATCACAGCC TACGCGGAATCTACCTTTCCTATCAACTTTTTCATTGACGGTCGTCAGCAGGACGGTCAGCTCGACCTCGATGCT GCTATCAGCTTCTTCCGTGATATGAGGTATCCGTCAGGTTTCTTCAGAGCTCCTAAACCAATGGGCGTCGAGGGT ATCGAGACTATTATAGCTGCTCATCCCATTCCTGCCGGCGCAAACAACGGCGCTGTCAACACCTATACTCCCGAC CCTCACTCTGGGGATTTCAATTCGTTCTGCACGGTATACACCAACTTCGTCAATGAAACGATTAGAGGTTTATAT CCTTCGCCGACGGGTATATTGAAAGACAGCTTGAACCGAAACTTGGATTTCCTTCACGATTTTGTATCAGGTTGC CCACAAATCTTCCCGTGGGGGAGATAA |
Transcript | >AgabiH97|080500 ATGATTAGCTCGCTAGACAGCTTGTTTAAAGCTACGCCATGGTTCTCAAACGCAAACATCCCCCCGTTACTTCTC AAGATCCCTGTGGCGCTTCTCCCTGCGAAACTATTGATGAATCCCTTTCTCAAACTTGCTGTGCTAGCCTTGGTA ACTGCACCATTAGCAGGGGCCTTCCCGTCCCATCGCTCCCTTGGTGGCCTCTCTTCAGAACAATTGGATAGAATT TTTCCAACGCTCAAGGTAGCTCCTCCGGAAGGTCCTCCGCCGCCTCAGGACGATACGTCGACCAGATTGGTTGAT GACGCTGATCATCCATTTATGCCGGCGGGTCCGAATGACATGCGTGGGCCTTGCCCTGGACTCAATACCCTTGCA TCCCACGGGTACCTGCCCCGGAATGGAATTGCAACTCCCGCTCAAGTCATCAATGCTACAATGCAAGGTTTCAAC ATGGAGTTCTCCCTTGCAAAGTTTGTCACATACGCCGCATTCCTGGTAGATGGCAATCCCATTACCAACTTGATG AGTATCGGAGGAAAAAGCGACCTCACTGGTGAAGACCCTCCCGACCCTGCAACGGTCGGTGGTTTGAACACACAC GCTGTATTCGAAGGTGATGCCAGCATGACCCGGGCCGATGCGTTCTTTGGGGATAACCACAGCTTTAATCAAACA TTGTGGGATGGGTTTGTCGACTTCAGTAACCGATTTGGTGCCGGGAAATACAACCTAACGGTGGCCACTGAACTT CGGATCCAAAGAATCCAGGACTCAATCGCAACAAACCCACAATTCTCATTCGTTTCTCCCCGTTTCATCACAGCC TACGCGGAATCTACCTTTCCTATCAACTTTTTCATTGACGGTCGTCAGCAGGACGGTCAGCTCGACCTCGATGCT GCTATCAGCTTCTTCCGTGATATGAGGTATCCGTCAGGTTTCTTCAGAGCTCCTAAACCAATGGGCGTCGAGGGT ATCGAGACTATTATAGCTGCTCATCCCATTCCTGCCGGCGCAAACAACGGCGCTGTCAACACCTATACTCCCGAC CCTCACTCTGGGGATTTCAATTCGTTCTGCACGGTATACACCAACTTCGTCAATGAAACGATTAGAGGTTTATAT CCTTCGCCGACGGGTATATTGAAAGACAGCTTGAACCGAAACTTGGATTTCCTTCACGATTTTGTATCAGGTTGC CCACAAATCTTCCCGTGGGGGAGATAA |
Gene | >AgabiH97|080500 ATGATTAGCTCGCTAGACAGCTTGTTTAAAGCTACGCCATGGTTCTCAAACGCAAACATCCCCCCGTTACTTCTC AAGATCCCTGTGGCGCTTCTCCCTGCGAAACTATTGATGAATCCCTTTCTCAAACTTGCTGTGCTAGCCTTGGTA ACTGCACCATTAGCAGGGGCCTTCCCGTCCCATCGCTCCCTTGGTGGCCTCTCTTCAGAACAATTGGATAGAATT TTTCCAACGCTCAAGGTAGCTCCTCCGGAAGGTCCTCCGCCGCCTCAGGACGATACGTCGACCAGATTGGTTGAT GACGCTGATCATCCATTTATGCCGGCGGGTCCGAATGACATGCGTGGGCCTTGCCCTGGACTCAATACCCTTGCA TCCCACGGGGTAATTTATCTCTTCGTCTACTCCCAATGCAAATTCACATCCGTCATGACAGTACCTGCCCCGGAA TGGAATTGCAACTCCCGCTCAAGTCATCAATGCTACAATGCAAGGCGAGTAATTTACAGTTTTTCCTGGAAATCT GGTACTAAAAATTTGCAGGTTTCAACATGGAGTTCTCCCTTGCAAAGTTTGTCACATACGCCGCATTCCTGGTAG ATGGCAATCCCATTACCAACTTGATGAGTATCGGAGGAAAAAGCGACCTCACTGGTGAAGACCCTCCCGACCCTG CAACGGTCGGTGGTTTGAACACACACGCTGTATTCGAAGGTGCTGTGTCTTTTTGAGGGTCGTGGGTTGTATTTA ACGATAGGTTCATATAGGTGATGCCAGCATGACCCGGGCCGATGCGTTCTTTGGGGATAACCACAGCTTTAATCA AACATTGTGGGATGGGGTACGTACGGTCGTTCTTTGATATTCTTCAATTACTCATATGTCCACCTTTCTCTTTCA GTTTGTCGACTTCAGTAACCGATTTGGTGCCGGGAAATACAACCTAACGGTGGCCACTGAACTTCGGATCCAAAG AATCCAGGACTCAATCGCAACAAACCCACAATTCTCATTCGTTTCTCCCCGTTTCATCACAGCCTACGCGGAATC TACCTTTCCTATCAACTTTTTCATTGACGGTCGTCAGCAGGACGGTCAGCTCGACCTCGATGCTGCTATCAGCTT CTTCCGTGATATGAGGTATCCGTCAGGTTTCTTCAGAGCTCCTAAACCAATGGGCGTCGAGGGTATCGAGACTAT TATAGCTGCTCATCCCATTCCTGCCGGCGCAAACAACGGCGCTGTCAACACCTATACTCCCGACCCTCACTCTGG GGATTTCAATTCGTTCTGCACGGTATACACCAACTTCGTCAATGAAACGATTAGAGGTTTATATCCTTCGCCGAC GGGTATATTGAAAGACAGCTTGAACCGAAACTTGGATTTCCTTCACGATTTTGTATCAGGTTGCCCACAAATCTT CCCGTGGGGGAGATAA |