© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|080490 |
| Gene name | |
| Location | scaffold_5:613031..614950 |
| Strand | + |
| Gene length (bp) | 1919 |
| Transcript length (bp) | 1584 |
| Coding sequence length (bp) | 1584 |
| Protein length (aa) | 528 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-34 | 47 | 478 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 27 | 493 | 4.0E-36 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 27 | 511 | 6.0E-35 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 11 | 511 | 1.0E-32 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 37 | 507 | 4.0E-31 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 63 | 200 | 5.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 27 | 493 | 4.0E-36 |
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 27 | 511 | 6.0E-35 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 11 | 511 | 1.0E-32 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 37 | 507 | 4.0E-31 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 63 | 200 | 5.0E-09 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 58 | 260 | 3.0E-08 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 58 | 260 | 4.0E-08 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 63 | 285 | 6.0E-08 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 58 | 239 | 7.0E-08 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 63 | 200 | 1.0E-07 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 85 | 250 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 42 | 64 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 113 | 132 | 19 |
| 4 | 172 | 194 | 22 |
| 5 | 214 | 236 | 22 |
| 6 | 323 | 345 | 22 |
| 7 | 360 | 382 | 22 |
| 8 | 395 | 414 | 19 |
| 9 | 429 | 451 | 22 |
| 10 | 458 | 480 | 22 |
| 11 | 495 | 517 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|080490 MTNAPDTVIHEETSAAIATPPNEQAVVEGAEQPRTPLPKFQLGLVMLIQFAEPITALVIYPFINQFVQATGVTGG DDRKTGYYAGIIESAFFLAEAATVFYWGRLSDRIGRRPVLMIGPLGLTFAMLKFGYSKSFLSMVISRCFQGVFNG NIGVSKTVMVELTDETNIGDAFAMMPLMWSIGSTVAPIMGGGLSNPAERWPNVFGKMETFRSHPYFLPCLVSASI ALISFVIAVLGFKETHPTLARSKSEEKDPIKDPEISQVSSTDSLLGHNDPADYGTTSTRRSPSPSSSESSMDSCN KIGKLNSEAPTLSSILSSKKMQFIIINYLFLTFSDMAYSVLMPLIYSTKIEHGGLGLNPYQIGMTMGIWGFVNAF VQINLLGKLIRKYGSARMYRYAYASFCVCLLTYPVSTYLARRNGGISVGVCISILVQLVFQFPLYMGYGAIHVVI AESSPKSILGSINGIVQMAGCTMRTVAPTIASSLFSISLQKRLLGGNFVYVVLYAVILVGVRSSLYLPERKKGTA RL* |
| Coding | >AgabiH97|080490 ATGACCAACGCCCCCGATACTGTCATCCATGAAGAGACTTCTGCAGCAATTGCTACCCCTCCAAATGAACAGGCG GTAGTAGAGGGTGCAGAGCAACCGCGGACGCCGCTCCCAAAATTCCAACTGGGCCTTGTAATGCTCATCCAATTT GCTGAACCTATCACCGCTCTCGTCATTTATCCGTTCATCAATCAGTTTGTACAGGCAACAGGAGTCACTGGAGGG GATGACAGGAAAACAGGTTATTACGCTGGAATCATTGAATCGGCTTTCTTTCTTGCTGAAGCCGCCACCGTCTTT TACTGGGGTCGTTTGTCCGATCGCATTGGCAGAAGACCTGTGTTGATGATTGGGCCCCTCGGCCTCACCTTTGCA ATGTTGAAATTTGGATATTCAAAATCGTTTTTGTCCATGGTAATCTCTCGTTGTTTCCAAGGCGTTTTCAATGGC AACATCGGGGTATCAAAAACTGTTATGGTAGAGTTGACGGACGAAACGAACATCGGAGACGCGTTCGCTATGATG CCATTGATGTGGAGTATAGGTTCAACCGTTGCCCCGATCATGGGTGGTGGTTTGAGTAACCCAGCAGAAAGGTGG CCCAACGTTTTCGGCAAAATGGAAACTTTCAGAAGCCACCCTTACTTCTTACCCTGCCTGGTCTCTGCATCTATT GCTCTAATCAGCTTCGTAATCGCTGTCTTAGGATTCAAGGAGACCCATCCTACCCTAGCACGCTCGAAGTCGGAA GAGAAAGACCCGATAAAGGACCCCGAAATTTCGCAGGTCAGCTCTACAGATAGTCTTCTGGGCCATAACGATCCG GCCGACTATGGTACAACCTCTACGCGCCGGTCTCCTTCCCCCTCATCTTCTGAATCTTCTATGGATTCGTGTAAC AAAATCGGAAAGCTCAATTCTGAAGCCCCGACCTTAAGCTCCATTCTCAGCTCCAAGAAGATGCAATTTATCATC ATCAACTACCTTTTCCTTACCTTCTCGGATATGGCTTACTCGGTTCTTATGCCACTAATTTATTCTACCAAAATT GAACACGGTGGTTTGGGTCTTAACCCATACCAAATCGGTATGACCATGGGCATTTGGGGCTTTGTCAACGCCTTT GTCCAAATCAACTTGCTTGGAAAACTGATCAGGAAATACGGTTCGGCTCGGATGTATAGATATGCCTATGCTTCC TTCTGCGTATGCCTCCTGACATATCCCGTCTCTACTTACCTTGCTCGTCGCAATGGAGGGATCAGCGTCGGAGTT TGCATTTCCATATTGGTCCAGCTTGTATTCCAATTTCCCTTATACATGGGTTACGGTGCAATTCATGTTGTCATC GCCGAATCTTCTCCGAAATCGATACTCGGGTCTATAAATGGTATAGTGCAGATGGCAGGATGTACTATGCGAACC GTCGCCCCCACTATTGCTTCGTCCTTATTCTCCATCTCTTTGCAAAAGCGCCTCTTAGGCGGGAACTTCGTTTAT GTTGTTTTGTACGCGGTGATCCTTGTCGGGGTCCGGTCTAGTCTATATTTGCCGGAGCGCAAAAAGGGGACTGCT CGTCTTTAG |
| Transcript | >AgabiH97|080490 ATGACCAACGCCCCCGATACTGTCATCCATGAAGAGACTTCTGCAGCAATTGCTACCCCTCCAAATGAACAGGCG GTAGTAGAGGGTGCAGAGCAACCGCGGACGCCGCTCCCAAAATTCCAACTGGGCCTTGTAATGCTCATCCAATTT GCTGAACCTATCACCGCTCTCGTCATTTATCCGTTCATCAATCAGTTTGTACAGGCAACAGGAGTCACTGGAGGG GATGACAGGAAAACAGGTTATTACGCTGGAATCATTGAATCGGCTTTCTTTCTTGCTGAAGCCGCCACCGTCTTT TACTGGGGTCGTTTGTCCGATCGCATTGGCAGAAGACCTGTGTTGATGATTGGGCCCCTCGGCCTCACCTTTGCA ATGTTGAAATTTGGATATTCAAAATCGTTTTTGTCCATGGTAATCTCTCGTTGTTTCCAAGGCGTTTTCAATGGC AACATCGGGGTATCAAAAACTGTTATGGTAGAGTTGACGGACGAAACGAACATCGGAGACGCGTTCGCTATGATG CCATTGATGTGGAGTATAGGTTCAACCGTTGCCCCGATCATGGGTGGTGGTTTGAGTAACCCAGCAGAAAGGTGG CCCAACGTTTTCGGCAAAATGGAAACTTTCAGAAGCCACCCTTACTTCTTACCCTGCCTGGTCTCTGCATCTATT GCTCTAATCAGCTTCGTAATCGCTGTCTTAGGATTCAAGGAGACCCATCCTACCCTAGCACGCTCGAAGTCGGAA GAGAAAGACCCGATAAAGGACCCCGAAATTTCGCAGGTCAGCTCTACAGATAGTCTTCTGGGCCATAACGATCCG GCCGACTATGGTACAACCTCTACGCGCCGGTCTCCTTCCCCCTCATCTTCTGAATCTTCTATGGATTCGTGTAAC AAAATCGGAAAGCTCAATTCTGAAGCCCCGACCTTAAGCTCCATTCTCAGCTCCAAGAAGATGCAATTTATCATC ATCAACTACCTTTTCCTTACCTTCTCGGATATGGCTTACTCGGTTCTTATGCCACTAATTTATTCTACCAAAATT GAACACGGTGGTTTGGGTCTTAACCCATACCAAATCGGTATGACCATGGGCATTTGGGGCTTTGTCAACGCCTTT GTCCAAATCAACTTGCTTGGAAAACTGATCAGGAAATACGGTTCGGCTCGGATGTATAGATATGCCTATGCTTCC TTCTGCGTATGCCTCCTGACATATCCCGTCTCTACTTACCTTGCTCGTCGCAATGGAGGGATCAGCGTCGGAGTT TGCATTTCCATATTGGTCCAGCTTGTATTCCAATTTCCCTTATACATGGGTTACGGTGCAATTCATGTTGTCATC GCCGAATCTTCTCCGAAATCGATACTCGGGTCTATAAATGGTATAGTGCAGATGGCAGGATGTACTATGCGAACC GTCGCCCCCACTATTGCTTCGTCCTTATTCTCCATCTCTTTGCAAAAGCGCCTCTTAGGCGGGAACTTCGTTTAT GTTGTTTTGTACGCGGTGATCCTTGTCGGGGTCCGGTCTAGTCTATATTTGCCGGAGCGCAAAAAGGGGACTGCT CGTCTTTAG |
| Gene | >AgabiH97|080490 ATGACCAACGCCCCCGATACTGTCATCCATGAAGAGACTTCTGCAGCAATTGCTACCCCTCCAAATGAACAGGCG GTAGTAGAGGGTGCAGAGCAACCGCGGACGCCGCTCCCAAAATTCCAACTGGGCCTTGTAATGCTCATCCAATTT GCTGAACCTATCACCGCTCTCGTCATTTATCCGTTCATCAATCAGTTTGTACAGGCAACAGGAGTCACTGGAGGG GATGACAGGAAAACAGGTTATTACGCTGGAATCATTGTGAGTGGTGCGACCTCGTATGACCCGACGCGCTCATTA TTTACCCCTACGCTAAGGAATCGGCTTTCTTTCTTGCTGAAGCCGCCACCGTCTTTTACTGGGGTCGTTTGTCCG ATCGCATTGGCAGAAGACCTGTGTTGATGATTGGGCCCCTCGGCCTCACCTTTGCAATGTTGAAATTTGGATATT CAAAATCGTTTTTGTCCATGGTAATCTCTCGTTGTTTCCAAGGCGTTTTCAATGGCAACATCGGTGCGTTAAAAT TGTTAAATTATACCCTGTATTTTATTCAACACCACATAAGGGGTATCAAAAACTGTTATGGTAGAGGTACGATTC TCCCGAAATGTTTGACACCCGTGGTACTTAATCTATCTAGTTGACGGACGAAACGAACATCGGAGACGCGTTCGC TATGATGCCATTGATGTGGAGTATAGGTTCAACCGTTGCGTGAGTTAGATGCATTCTTCATCTATTTGAGCGTGT GCTCATTCATGTGCTCAGCCCGATCATGGGTGGTGGTTTGAGTAACCCAGCAGAAAGGTGGCCCAACGTTTTCGG CAAAATGGAAACTTTCAGAAGCCACCCTTACTTCTTACCCTGCCTGGTCTCTGCATCTATTGCTCTAATCAGCTT CGTAATCGCTGTCTTAGGATTCAAGGAGGTACGGACGGATTTTCCTATTTTGGGATTTTGGTTGCGTTTATTCAC GTTGCATGCATACTAGACCCATCCTACCCTAGCACGCTCGAAGTCGGAAGAGAAAGACCCGATAAAGGACCCCGA AATTTCGCAGGTCAGCTCTACAGATAGTCTTCTGGGCCATAACGATCCGGCCGACTATGGTACAACCTCTACGCG CCGGTCTCCTTCCCCCTCATCTTCTGAATCTTCTATGGATTCGTGTAACAAAATCGGAAAGCTCAATTCTGAAGC CCCGACCTTAAGCTCCATTCTCAGCTCCAAGAAGATGCAATTTATCATCATCAACTACCTTTTCCTTACCTTCTC GGATATGGCTTACTCGGTTCTTATGCCACTAATTTATTCTACCAAAATTGAACACGGTGGTTTGGGTCTTAACCC ATACCAAATCGGTATGACCATGGGCATTTGGGGCTTTGTCAACGCCTTTGTCCAAATCAACTTGCTTGGAAAACT GATCAGGAAATACGGTTCGGCTCGGATGTATAGATATGCCTATGCTTCCTTCTGCGTATGCCTCCTGACATATCC CGTCTCTACTTACCTTGCTCGTCGCAATGGAGGGATCAGCGTCGGAGTTTGCATTTCCATATTGGTCCAGCTTGT ATTCCAATTTCCCTTATACATGGGTTACGGTATGTACCTGCTGTCATCCATTTGTCTTGATCTGGCAAGCTAACT TTAGTTATCTTCCAGGTGCAATTCATGTTGTCATCGCCGAATCTTCTCCGAAATCGATACTCGGGTCTATAAATG GTATAGTGCAGATGGCAGGATGTACTATGCGAACCGTCGCCCCCACTATTGCTTCGTCCTTATTCTCCATCTCTT TGCAAAAGCGCCTCTTAGGCGGGAACTTCGTTTATGTTGTTTTGTACGCGGTGATCCTTGTCGGGGTCCGGTCTA GTCTATATTTGCCGGAGCGCAAAAAGGGGACTGCTCGTCTTTAG |