Protein ID | AgabiH97|080380 |
Gene name | |
Location | scaffold_5:580535..582464 |
Strand | - |
Gene length (bp) | 1929 |
Transcript length (bp) | 1425 |
Coding sequence length (bp) | 1425 |
Protein length (aa) | 475 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-19 | 34 | 186 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 9 | 439 | 2.0E-46 |
sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 15 | 464 | 2.0E-42 |
sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 15 | 454 | 3.0E-36 |
sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 25 | 261 | 5.0E-27 |
sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 28 | 384 | 2.0E-11 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 9 | 439 | 2.0E-46 |
sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 15 | 464 | 2.0E-42 |
sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 15 | 454 | 3.0E-36 |
sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 25 | 261 | 5.0E-27 |
sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 28 | 384 | 2.0E-11 |
sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 46 | 195 | 5.0E-11 |
sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 46 | 195 | 7.0E-11 |
sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 45 | 363 | 1.0E-10 |
sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 31 | 368 | 3.0E-10 |
sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 45 | 198 | 2.0E-09 |
sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 46 | 344 | 3.0E-09 |
sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 32 | 230 | 7.0E-09 |
sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 46 | 183 | 1.0E-08 |
sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 94 | 212 | 2.0E-08 |
sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 73 | 212 | 7.0E-08 |
sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 46 | 244 | 7.0E-08 |
sp|A7ZZ10|MDTG_ECOHS | Multidrug resistance protein MdtG OS=Escherichia coli O9:H4 (strain HS) GN=mdtG PE=3 SV=1 | 20 | 388 | 1.0E-07 |
sp|P77726|YAJR_ECOLI | Inner membrane transport protein YajR OS=Escherichia coli (strain K12) GN=yajR PE=1 SV=2 | 58 | 177 | 1.0E-07 |
sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 46 | 244 | 2.0E-07 |
sp|B7NAS9|MDTG_ECOLU | Multidrug resistance protein MdtG OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 2.0E-07 |
sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 73 | 212 | 2.0E-07 |
sp|B1LIV8|MDTG_ECOSM | Multidrug resistance protein MdtG OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 7.0E-07 |
sp|Q8FIR9|MDTG_ECOL6 | Multidrug resistance protein MdtG OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 8.0E-07 |
sp|Q0TJ20|MDTG_ECOL5 | Multidrug resistance protein MdtG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 8.0E-07 |
sp|B6I9D0|MDTG_ECOSE | Multidrug resistance protein MdtG OS=Escherichia coli (strain SE11) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|A7ZKF6|MDTG_ECO24 | Multidrug resistance protein MdtG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|Q8X9I3|MDTG_ECO57 | Multidrug resistance protein MdtG OS=Escherichia coli O157:H7 GN=mdtG PE=3 SV=2 | 20 | 388 | 9.0E-07 |
sp|B7M928|MDTG_ECO8A | Multidrug resistance protein MdtG OS=Escherichia coli O8 (strain IAI1) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|C4ZRZ3|MDTG_ECOBW | Multidrug resistance protein MdtG OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|B1X9G6|MDTG_ECODH | Multidrug resistance protein MdtG OS=Escherichia coli (strain K12 / DH10B) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|B1IV49|MDTG_ECOLC | Multidrug resistance protein MdtG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|P25744|MDTG_ECOLI | Multidrug resistance protein MdtG OS=Escherichia coli (strain K12) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|B7UP67|MDTG_ECO27 | Multidrug resistance protein MdtG OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|B7MIJ4|MDTG_ECO45 | Multidrug resistance protein MdtG OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|A1A9U9|MDTG_ECOK1 | Multidrug resistance protein MdtG OS=Escherichia coli O1:K1 / APEC GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|Q1RDA5|MDTG_ECOUT | Multidrug resistance protein MdtG OS=Escherichia coli (strain UTI89 / UPEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 9.0E-07 |
sp|B7LFG4|MDTG_ECO55 | Multidrug resistance protein MdtG OS=Escherichia coli (strain 55989 / EAEC) GN=mdtG PE=3 SV=1 | 20 | 388 | 2.0E-06 |
sp|B7MTI5|MDTG_ECO81 | Multidrug resistance protein MdtG OS=Escherichia coli O81 (strain ED1a) GN=mdtG PE=3 SV=1 | 45 | 388 | 3.0E-06 |
sp|B7NL82|MDTG_ECO7I | Multidrug resistance protein MdtG OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mdtG PE=3 SV=1 | 45 | 388 | 3.0E-06 |
sp|D2BX50|MDTG_DICD5 | Multidrug resistance protein MdtG OS=Dickeya dadantii (strain Ech586) GN=mdtG PE=3 SV=1 | 46 | 309 | 4.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0051179 | localization | No |
GO:0003674 | molecular_function | No |
GO:0051234 | establishment of localization | No |
GO:0008150 | biological_process | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 45 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 68 | 90 | 22 |
2 | 102 | 124 | 22 |
3 | 203 | 225 | 22 |
4 | 269 | 291 | 22 |
5 | 315 | 334 | 19 |
6 | 346 | 368 | 22 |
7 | 383 | 405 | 22 |
8 | 412 | 434 | 22 |
9 | 449 | 471 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|080380 MTATETPVDEETPLLQQQPKKKTPLPWSQYSLVLLLQLGEPMTSQVIYPFAPQLIRDLGITGGDETKVGYYVGIM QSLFFFTQAWTVLHWSRLSDRVGRKPVILIGLFGLSMSMYCFGLSTTFWGLVMSRALNGALNGNIGVIKSMMAEL TDSTNIAQAYAYMPIAWSTGGTLGPIIGGSLSHPAERFPSLFGNSEFLKKYPYFLPCAVPATYTVCAWLITYIFL KETVQRPTSFRNLIFGSDKKLKLEQNQVATVDDSDDKPLPLRSLLVFRVIIAASNYAFLSLVDIAFRAIQPVFLS TPIELGGLGLPPSTIGNILSVYGVLNGFIQIFFFAKMHDRWGSKKVFTAGIAACIPMFLLFPIINYLARSQGLTP LVWGFVSLQVGLAMMPSLSFSSIFIFITAASPNKASLGATNGLCQVAVSVMRAFGPAAANSLFSLSMAYNLLGGY LVYYILVVIVGIALFVASILPSSV* |
Coding | >AgabiH97|080380 ATGACTGCCACAGAAACCCCTGTTGACGAGGAGACACCTTTGTTGCAACAGCAGCCGAAGAAGAAAACGCCCCTA CCATGGTCTCAATATTCACTTGTTTTGCTTTTGCAACTAGGCGAACCAATGACTTCACAGGTCATCTACCCGTTC GCTCCTCAGCTCATTCGGGATCTCGGTATCACCGGCGGTGATGAAACTAAAGTGGGGTATTATGTTGGAATCATG CAATCTCTGTTCTTCTTCACGCAAGCGTGGACTGTTCTTCACTGGAGTCGGCTGTCGGATAGAGTGGGCCGTAAA CCGGTCATTCTAATCGGTCTCTTCGGCCTTTCTATGTCCATGTATTGCTTCGGCTTGTCAACGACATTTTGGGGG CTTGTCATGAGTCGGGCTTTGAACGGAGCTCTAAATGGCAACATTGGAGTGATCAAAAGCATGATGGCAGAGTTG ACCGATTCGACAAACATTGCCCAAGCTTATGCATACATGCCGATAGCATGGTCAACCGGTGGAACTTTAGGTCCA ATTATTGGAGGATCCCTCTCACATCCAGCAGAACGATTCCCTTCCCTATTCGGGAACAGTGAATTCCTCAAAAAA TACCCTTACTTTTTGCCTTGTGCAGTTCCGGCCACGTACACCGTCTGCGCCTGGCTTATTACTTATATCTTCTTG AAAGAGACAGTTCAGCGTCCGACATCTTTCCGAAACCTTATTTTTGGATCTGATAAAAAGCTCAAGCTTGAACAA AATCAAGTTGCGACCGTTGACGATAGCGATGACAAACCTCTTCCTTTACGATCTCTGTTGGTGTTTCGAGTCATC ATCGCTGCAAGCAATTACGCTTTCCTTTCTTTGGTCGACATTGCTTTCCGTGCAATTCAACCGGTGTTCCTTTCG ACTCCTATTGAATTGGGTGGACTGGGACTTCCTCCTTCCACGATTGGAAATATTTTATCCGTGTATGGGGTTCTC AATGGTTTCATCCAGATCTTTTTCTTCGCCAAAATGCACGATCGCTGGGGCTCGAAAAAGGTTTTTACAGCCGGC ATTGCCGCGTGTATCCCTATGTTTCTTCTCTTCCCCATCATCAACTATTTAGCACGTTCGCAAGGATTGACCCCA TTGGTATGGGGCTTTGTATCTCTACAGGTCGGCTTGGCTATGATGCCAAGCTTGTCGTTCAGCTCCATTTTCATT TTTATCACAGCAGCGTCCCCTAACAAGGCTTCTCTTGGCGCTACCAATGGATTGTGTCAGGTGGCTGTCAGTGTG ATGCGGGCATTCGGCCCTGCAGCGGCGAATTCGTTGTTTTCGCTGTCGATGGCATATAACTTGTTGGGTGGATAT CTCGTCTATTACATACTTGTTGTAATTGTTGGTATTGCGCTTTTTGTAGCGTCTATTTTGCCGAGCTCTGTATGA |
Transcript | >AgabiH97|080380 ATGACTGCCACAGAAACCCCTGTTGACGAGGAGACACCTTTGTTGCAACAGCAGCCGAAGAAGAAAACGCCCCTA CCATGGTCTCAATATTCACTTGTTTTGCTTTTGCAACTAGGCGAACCAATGACTTCACAGGTCATCTACCCGTTC GCTCCTCAGCTCATTCGGGATCTCGGTATCACCGGCGGTGATGAAACTAAAGTGGGGTATTATGTTGGAATCATG CAATCTCTGTTCTTCTTCACGCAAGCGTGGACTGTTCTTCACTGGAGTCGGCTGTCGGATAGAGTGGGCCGTAAA CCGGTCATTCTAATCGGTCTCTTCGGCCTTTCTATGTCCATGTATTGCTTCGGCTTGTCAACGACATTTTGGGGG CTTGTCATGAGTCGGGCTTTGAACGGAGCTCTAAATGGCAACATTGGAGTGATCAAAAGCATGATGGCAGAGTTG ACCGATTCGACAAACATTGCCCAAGCTTATGCATACATGCCGATAGCATGGTCAACCGGTGGAACTTTAGGTCCA ATTATTGGAGGATCCCTCTCACATCCAGCAGAACGATTCCCTTCCCTATTCGGGAACAGTGAATTCCTCAAAAAA TACCCTTACTTTTTGCCTTGTGCAGTTCCGGCCACGTACACCGTCTGCGCCTGGCTTATTACTTATATCTTCTTG AAAGAGACAGTTCAGCGTCCGACATCTTTCCGAAACCTTATTTTTGGATCTGATAAAAAGCTCAAGCTTGAACAA AATCAAGTTGCGACCGTTGACGATAGCGATGACAAACCTCTTCCTTTACGATCTCTGTTGGTGTTTCGAGTCATC ATCGCTGCAAGCAATTACGCTTTCCTTTCTTTGGTCGACATTGCTTTCCGTGCAATTCAACCGGTGTTCCTTTCG ACTCCTATTGAATTGGGTGGACTGGGACTTCCTCCTTCCACGATTGGAAATATTTTATCCGTGTATGGGGTTCTC AATGGTTTCATCCAGATCTTTTTCTTCGCCAAAATGCACGATCGCTGGGGCTCGAAAAAGGTTTTTACAGCCGGC ATTGCCGCGTGTATCCCTATGTTTCTTCTCTTCCCCATCATCAACTATTTAGCACGTTCGCAAGGATTGACCCCA TTGGTATGGGGCTTTGTATCTCTACAGGTCGGCTTGGCTATGATGCCAAGCTTGTCGTTCAGCTCCATTTTCATT TTTATCACAGCAGCGTCCCCTAACAAGGCTTCTCTTGGCGCTACCAATGGATTGTGTCAGGTGGCTGTCAGTGTG ATGCGGGCATTCGGCCCTGCAGCGGCGAATTCGTTGTTTTCGCTGTCGATGGCATATAACTTGTTGGGTGGATAT CTCGTCTATTACATACTTGTTGTAATTGTTGGTATTGCGCTTTTTGTAGCGTCTATTTTGCCGAGCTCTGTATGA |
Gene | >AgabiH97|080380 ATGACTGCCACAGAAACCCCTGTTGACGAGGAGACACCTTTGTTGCAACAGCAGCCGAAGAAGAAAACGCCCCTA CCATGGTCTCAATATTCACTTGTTTTGCTTTTGCAACTAGGCGAACCAATGACTTCACAGGTCATCTACCCGTTC GCTCCTCAGGCAAGACTTATCTGCTTCAATTGAATTGTGATTCAAATCATATAAATGAATGATGGTCTTCAGCTC ATTCGGGATCTCGGTATCACCGGCGGTGATGAAACTAAAGTGGGGTATTATGTTGGAATCATGGTTTGTGCTATT TTTTGTCTATTGAGCTAATGGTCAACTGACGAGTCCACCTGCCAGCAATCTCTGTTCTTCTTCACGCAAGCGTGG ACTGTTCTTCACTGGAGTCGGCTGTCGGATAGAGTGGGCCGTAAACCGGTCATTCTAATCGGTCTCTTCGGCCTT TCTATGTCCATGTATTGCTTCGGCTTGTCAACGACATTTTGGGGGCTTGTCATGAGGTAAGTCATGAGCATACTG TGGCTTCGATAATGAATTTCATGTGTTTGTTCAACAGTCGGGCTTTGAACGGAGCTCTAAGTGCGTTTTTTCTGC GTAAACCTACGATGACGTAGAAGATTGCTCATAGCTTGAATGATAGATGGCAACATTGGAGTGATCAAAAGGTTT GCATTTGCACCTAAGAAGGGGCTCAGCGTGCTCACCATTATAATAGCATGATGGCAGAGTTGACCGATTCGACAA ACATTGCCCAAGTAAGCGGCACCTCCTTTTCGATTTCGGTATGCTGATTGTGCCAGGCTTATGCATACATGCCGA TAGCATGGTCAACCGGTGGAACTGTGAGTAGTGCTCGTGGACATCTTTCTTATCGGCATGTGACTTATAAGTTTT GTAGTTAGGTCCAATTATTGGAGGATCCCTCTCACATCCAGCAGAACGATTCCCTTCCCTATTCGGGAACAGTGA ATTCCTCAAAAAATACCCTTACTTTTTGCCTTGTGCAGTTCCGGCCACGTACACCGTCTGCGCCTGGCTTATTAC TTATATCTTCTTGAAAGAGACAGTTCAGCGTCCGACATCTTTCCGAAACCTTATTTTTGGATCTGATAAAAAGCT CAAGCTTGAACAAAATCAAGTTGCGACCGTTGACGATAGCGATGACAAACCTCTTCCTTTACGATCTCTGTTGGT GTTTCGAGTCATCATCGCTGCAAGCAATTACGCTTTCCTTTCTTTGGTCGACATTGCTTTCCGTGCAATTCAACC GGTGTTCCTTTCGACTCCTATTGAATTGGGTGGACTGGGACTTCCTCCTTCCACGATTGGAAATATTTTATCCGT GTATGGGGTTCTCAATGGTTTCATCCAGATCTTTTTCTTCGCCAAAATGCACGATCGCTGGGGCTCGAAAAAGGT TTTTACAGCCGGCATTGCCGCGTGTATCCCTATGTTTCTTCTCTTCCCCATCATCAACTATTTAGCACGTTCGCA AGGATTGACCCCATTGGTATGGGGCTTTGTATCTCTACAGGTCGGCTTGGCTATGATGCCAAGCTTGTCGTTCAG TGCGTGCTTTTGCTTTGCTGCTGTTAACTCCCGTTGATAATTACTTCTGAACCAGGCTCCATTTTCATTTTTATC ACAGCAGCGTCCCCTAACAAGGCTTCTCTTGGCGCTACCAATGGATTGTGTCAGGTGGGTAACTCTATCTGACTG AGACGCAGCAGGAGTAATGAGTCATTTATTCTGTTATAGGTGGCTGTCAGTGTGATGCGGGCATTCGGCCCTGCA GCGGCGAATTCGTTGTTTTCGCTGTCGATGGCATATAACTTGTTGGGTGGATATCTCGTCTATTACATACTTGTT GTAATTGTTGGTATTGCGCTTTTTGTAGCGTCTATTTTGCCGAGCTCTGTATGA |