Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|079870
Gene name
Locationscaffold_5:444818..447347
Strand-
Gene length (bp)2529
Transcript length (bp)1635
Coding sequence length (bp)1635
Protein length (aa) 545

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09362 DUF1996 Domain of unknown function (DUF1996) 5.6E-73 35 252

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|079870
MRSLPLLSIVFAFTASTQAYWLMGVENFITTERMDPIVNPDKVASHVHSVLGGSNFRFNTNTQALRNSQCTSIPI
PEDKSNYWFPHLYFLWSNDYLFDDKPGTTTAFPDDFRMISGDPGLRTYDGNSHAQQAVTFLCLDFDGQSTRHNSL
PSGSCPSGIRAQINFPSCWDGKNVDSPDHKSHVAFLSGGPDSGTCSDPKYPVAVPRIFVEVYWSSHDFESVRSQA
MNPSQPFVYSHGDPTGYGYHADFFNGWDKGVLQNAVDKCHCNIYGDPTCCVDQGIFHMNKGQTCRITKSINEATT
GTIPKLPGNNPVQPEGKRAVMFPDNTSPQLISPVYVYTGDQPTQTGTIVAGGFPVTSSVSPISSIPTSSHGPQPV
SSSAITNVQVPSTSTSSITSYAHTIPATTIKFPSQTFTIPSFSVPSIHIPTPSFPHSFPNGNNNGLNSNHNSPNS
GGHFIPVDDDDDEELEDRVSVVSRPANSCSGPGNKGKEARQYKSRTEPSKRTLFSEGFEEVKARVGAPPPVPDVT
DSRNVRRSHRHRLSQRMAN*
Coding >AgabiH97|079870
ATGAGATCGCTGCCACTGCTTTCTATCGTCTTTGCTTTCACGGCTTCTACGCAGGCGTATTGGCTGATGGGCGTT
GAAAACTTCATAACAACTGAACGAATGGATCCCATCGTGAATCCCGACAAAGTGGCTAGTCACGTGCATTCAGTG
CTGGGTGGAAGCAACTTTAGGTTCAATACTAACACCCAAGCCCTTCGAAACAGCCAGTGCACTTCTATCCCAATA
CCAGAGGACAAATCAAACTATTGGTTCCCGCATCTGTACTTCCTATGGTCCAACGATTATCTGTTCGACGACAAG
CCAGGAACGACAACGGCTTTTCCGGACGACTTCCGTATGATTAGTGGTGACCCGGGTCTCCGCACCTATGATGGC
AATAGTCATGCTCAACAAGCTGTAACGTTTTTGTGCTTGGACTTTGACGGCCAATCTACACGTCACAATTCTCTA
CCATCTGGATCGTGTCCATCTGGTATTCGCGCACAGATTAATTTCCCTAGCTGTTGGGATGGAAAGAATGTGGAT
TCGCCAGATCATAAATCCCATGTCGCCTTCCTCTCAGGCGGACCTGACTCAGGTACATGTAGCGATCCCAAATAT
CCTGTGGCTGTCCCTCGAATCTTCGTGGAAGTATATTGGTCAAGCCACGACTTTGAATCCGTGCGATCTCAGGCT
ATGAACCCTTCACAACCATTTGTATACTCCCATGGTGATCCAACTGGCTATGGTTACCATGCAGACTTCTTCAAC
GGTTGGGACAAAGGAGTTCTCCAAAACGCCGTCGATAAATGTCATTGCAATATCTATGGCGACCCAACCTGTTGC
GTGGATCAAGGAATTTTTCATATGAACAAAGGGCAAACATGCCGAATAACTAAATCTATTAACGAAGCAACGACA
GGGACTATCCCGAAATTACCAGGAAATAATCCTGTACAACCAGAAGGAAAGCGTGCTGTCATGTTCCCGGATAAC
ACCTCTCCACAATTGATTTCCCCTGTATATGTTTACACGGGCGATCAACCTACACAAACAGGAACCATTGTGGCA
GGAGGGTTTCCTGTTACTTCATCTGTTTCACCCATTTCATCTATACCAACCTCATCTCATGGACCTCAACCCGTC
TCCTCCAGCGCAATTACCAATGTACAAGTACCATCTACATCGACATCCTCCATAACTTCATATGCGCACACCATC
CCAGCCACAACTATCAAATTTCCCTCCCAAACATTCACCATACCCTCCTTCTCAGTTCCTTCAATTCATATACCT
ACGCCCTCATTCCCCCACTCCTTTCCGAATGGTAACAATAATGGGCTTAATTCAAACCATAATAGCCCTAATTCT
GGTGGTCATTTTATCCCTGTCGATGACGATGACGATGAAGAACTTGAAGATAGAGTTTCTGTTGTCTCACGACCA
GCAAACTCCTGCTCTGGTCCAGGGAATAAAGGGAAGGAGGCGCGTCAATACAAATCGAGGACAGAACCTTCTAAA
CGCACTCTTTTCTCTGAAGGATTTGAAGAAGTTAAAGCGCGCGTCGGGGCCCCTCCCCCCGTTCCGGATGTGACA
GATTCGAGAAACGTTCGTCGTTCTCATCGTCATCGTCTTTCGCAACGCATGGCAAATTAG
Transcript >AgabiH97|079870
ATGAGATCGCTGCCACTGCTTTCTATCGTCTTTGCTTTCACGGCTTCTACGCAGGCGTATTGGCTGATGGGCGTT
GAAAACTTCATAACAACTGAACGAATGGATCCCATCGTGAATCCCGACAAAGTGGCTAGTCACGTGCATTCAGTG
CTGGGTGGAAGCAACTTTAGGTTCAATACTAACACCCAAGCCCTTCGAAACAGCCAGTGCACTTCTATCCCAATA
CCAGAGGACAAATCAAACTATTGGTTCCCGCATCTGTACTTCCTATGGTCCAACGATTATCTGTTCGACGACAAG
CCAGGAACGACAACGGCTTTTCCGGACGACTTCCGTATGATTAGTGGTGACCCGGGTCTCCGCACCTATGATGGC
AATAGTCATGCTCAACAAGCTGTAACGTTTTTGTGCTTGGACTTTGACGGCCAATCTACACGTCACAATTCTCTA
CCATCTGGATCGTGTCCATCTGGTATTCGCGCACAGATTAATTTCCCTAGCTGTTGGGATGGAAAGAATGTGGAT
TCGCCAGATCATAAATCCCATGTCGCCTTCCTCTCAGGCGGACCTGACTCAGGTACATGTAGCGATCCCAAATAT
CCTGTGGCTGTCCCTCGAATCTTCGTGGAAGTATATTGGTCAAGCCACGACTTTGAATCCGTGCGATCTCAGGCT
ATGAACCCTTCACAACCATTTGTATACTCCCATGGTGATCCAACTGGCTATGGTTACCATGCAGACTTCTTCAAC
GGTTGGGACAAAGGAGTTCTCCAAAACGCCGTCGATAAATGTCATTGCAATATCTATGGCGACCCAACCTGTTGC
GTGGATCAAGGAATTTTTCATATGAACAAAGGGCAAACATGCCGAATAACTAAATCTATTAACGAAGCAACGACA
GGGACTATCCCGAAATTACCAGGAAATAATCCTGTACAACCAGAAGGAAAGCGTGCTGTCATGTTCCCGGATAAC
ACCTCTCCACAATTGATTTCCCCTGTATATGTTTACACGGGCGATCAACCTACACAAACAGGAACCATTGTGGCA
GGAGGGTTTCCTGTTACTTCATCTGTTTCACCCATTTCATCTATACCAACCTCATCTCATGGACCTCAACCCGTC
TCCTCCAGCGCAATTACCAATGTACAAGTACCATCTACATCGACATCCTCCATAACTTCATATGCGCACACCATC
CCAGCCACAACTATCAAATTTCCCTCCCAAACATTCACCATACCCTCCTTCTCAGTTCCTTCAATTCATATACCT
ACGCCCTCATTCCCCCACTCCTTTCCGAATGGTAACAATAATGGGCTTAATTCAAACCATAATAGCCCTAATTCT
GGTGGTCATTTTATCCCTGTCGATGACGATGACGATGAAGAACTTGAAGATAGAGTTTCTGTTGTCTCACGACCA
GCAAACTCCTGCTCTGGTCCAGGGAATAAAGGGAAGGAGGCGCGTCAATACAAATCGAGGACAGAACCTTCTAAA
CGCACTCTTTTCTCTGAAGGATTTGAAGAAGTTAAAGCGCGCGTCGGGGCCCCTCCCCCCGTTCCGGATGTGACA
GATTCGAGAAACGTTCGTCGTTCTCATCGTCATCGTCTTTCGCAACGCATGGCAAATTAG
Gene >AgabiH97|079870
ATGAGATCGCTGCCACTGCTTTCTATCGTCTTTGCTTTCACGGCTTCTACGCAGGCGTATTGGCTGATGGGCGTT
GGTACGACCTTTCTGCAATTTTTGTACTGGAGTCCTCTGAACGTCTTTCAACGACCAGAAAACTTCATAACAACT
GAACGAATGGATCCCATCGTGAATCCCGACAAAGTGGCTAGTCACGTGCATTCAGGTACGCCACATGGAATGAAC
GAGTCGTCCCTAGCGCGCCTAATAATTTAATTTCACCCTTACTTTCTAACCTAGTGCTGGGTGGAAGCAACTTTA
GGTTCAATACTAACACCCAAGCCCTTCGAAACAGCCAGTGCACTTCTATCCCAATACCAGAGGACAAATCAAACT
ATTGGTTCCCGGTATGTGTATCCTCGCTTTTTCACATAAGGCACAATGATTGAAAGTACTTGTAGCATCTGTACT
TCCTGTATGATTGGAAAGTTTTTCTTCGTGTGTAAATATCTTGATTGTGTTCATCTAGATGGTCCAACGGTAGTT
TTACCAGCCTCAACGGCGGCGCCGTCATGTAAGTTTTGGTGACGACGTTTCTAACCGGCAAGTTACTCAGCCTTT
GTTTTACAGTTGTATGTTTAATCATGATTTCATCGAGATCAAGGTGAACAATTTTGTACAGATTATCTGTTCGAC
GACAAGCCAGGAACGACAACGGCTTTTCCGGACGACGTGAGTAACTCTCAAAGATGTTTCTCGAAACTTGTTTCT
GATAGCTTCTAAAGTTCCGTATGATTAGTGGTATGCCCGGCTAGTTTCTTCGTTTTGAATACTTTTCCAACGATT
TTCTAGGTGACCCGGGTCTCCGCACCTATGATGGCAATAGTCATGCTCAACAAGCTGTAACGTTTTTGTGCTTGG
ACTTTGACGGCCAATCTACACGTCACAATTCTCTACCATCTGGATCGTGTCCATCTGGTATTCGCGCACAGATTG
TAAGATTGTACCTTCTTCTTATAATGCCCCTTCTATTCTTCGCTCTGATCCACAATCATTAGAATTTCCCTAGCT
GTTGGGATGGAAAGGTACGTTTAGATTTTCTTGAGACTCCAAGGGGATGTTATAAACACCTTGTCTAGAATGTGG
ATTCGCCAGATCATAAATCCCATGTCGCCTTCCTCTCAGGCGGACCTGACTCAGGTACATGTAGCGATCCCAAAT
ATCCTGTGGCTGTCCCTCGAATCTTCGTGGAAGTAAGTCTCATGATTTCCATGTTCAGCTAGCTTTTACGCAATT
CATATAGGTATATTGGTCAAGCCACGACTTTGAATCCGTGCGATCTCAGGCTATGAACCCTTCACAACCATTTGT
GTATGTTTTACTGTCACTTGTGATTTTATGGCCGTTCAATCGTCCTACTTTTAGATACTCCCATGGTGATCCAAC
TGGCTATGGTTACCATGCAGGTTTGAGCCCGTTCATCTAGGCTGTAATGAGCTTGCGCTTATTGATGCGATGCAA
TAGACTTCTTCAACGGTTGGGACAAAGGAGTTCTCCAAAACGCCGTCGATAAATGTCATTGCAATATCTATGGCG
ACGTAAGCCGCCTTTCATCCTCATCATATTTCCCAATAGTATCTCTGACTACTATTAATGACTTATCAGCCAACC
TGTTGCGTGGATCAAGGAATTTTTCATATGAACAAAGGGCAAACATGCCGAATAACTAAATCTATTAACGAAGCA
AGTGAGTACCCTGATGTGGCTCTTCATTTGATTCGAAAATTTACTAATGATCGCATGAATTTAGCGACAGGGACT
ATCCCGAAATTACCAGGAAATAATCCTGTACAACCAGAAGGAAAGCGTGCTGTCATGTTCCCGGATAACACCTCT
CCACAATTGATTTCCCCTGTATATGTTTACACGGGCGATCAACCTACACAAACAGGAACCATTGTGGCAGGAGGG
TTTCCTGTTACTTCATCTGTTTCACCCATTTCATCTATACCAACCTCATCTCATGGACCTCAACCCGTCTCCTCC
AGCGCAATTACCAATGTACAAGTACCATCTACATCGACATCCTCCATAACTTCATATGCGCACACCATCCCAGCC
ACAACTATCAAATTTCCCTCCCAAACATTCACCATACCCTCCTTCTCAGTTCCTTCAATTCATATACCTACGCCC
TCATTCCCCCACTCCTTTCCGAATGGTAACAATAATGGGCTTAATTCAAACCATAATAGCCCTAATTCTGGTGGT
CATTTTATCCCTGTCGATGACGATGACGATGAAGAACTTGAAGATAGAGTTTCTGTTGTCTCACGACCAGCAAAC
TCCTGCTCTGGTCCAGGGAATAAAGGGAAGGAGGCGCGTCAATACAAATCGAGGACAGAACCTTCTAAACGCACT
CTTTTCTCTGAAGGATTTGAAGAAGTTAAAGCGCGCGTCGGGGCCCCTCCCCCCGTTCCGGATGTGACAGATTCG
AGAAACGTTCGTCGTTCTCATCGTCATCGTCTTTCGCAACGCATGGCAAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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