Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|079100
Gene name
Locationscaffold_5:233995..235336
Strand+
Gene length (bp)1341
Transcript length (bp)1011
Coding sequence length (bp)1011
Protein length (aa) 337

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00657 Lipase_GDSL GDSL-like Lipase/Acylhydrolase 9.0E-09 65 326

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016788 hydrolase activity, acting on ester bonds Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2038 0.0576 0.927 0.1646 0.0769 0.0175 0.2012 0.2547 0.1015 0.0044

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup1659
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|069260
Agaricus bisporus var bisporus H39 AgabiH39|079100
Agaricus bisporus var bisporus H97 AgabiH97|069260
Agaricus bisporus var bisporus H97 AgabiH97|079100 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|079100
MYLDSLAIIIAFARILSASFLNQIPFPAPPPNGDIHLAINPTCGQLSGDTADINAGIDKHSIKTIISFGDSYTDG
GKSDGSPLDPPILVFPNPLAGGRSTNGLTWVENVANDLNATIKDYAQAGACIDLKLWPSNPRKIDFLGQMKTFLG
QNNALDPNTTLYSIFFGINDYLASLIDGDHLTEAAQVLLDQIKILASPPTNARKFMVLDVYGRGTTIPSGETFKQ
IIYSGLSSFRVNGIQIINDDKHQPQRVTLDISYINFANIWKGVLGPNPGFEKFGYVSEDACTKCTAELGCTTIGM
CDDPEHYFYWIPGHPSKETMRIMADYVREVWDQCGV*
Coding >AgabiH97|079100
ATGTATCTCGACTCCCTCGCCATTATCATTGCCTTTGCTCGTATCCTCTCCGCCTCTTTTCTCAACCAAATTCCA
TTCCCAGCACCCCCTCCAAACGGCGACATCCATCTCGCCATCAATCCAACCTGTGGTCAACTTTCTGGCGACACT
GCAGATATCAATGCTGGTATAGACAAACACTCAATCAAGACCATAATCTCGTTCGGAGACAGTTACACCGACGGT
GGTAAATCCGACGGATCACCACTCGATCCTCCTATCCTAGTCTTCCCCAATCCTCTCGCAGGTGGCAGATCCACC
AACGGCCTAACCTGGGTCGAGAACGTTGCAAACGACCTTAACGCAACCATCAAAGACTACGCACAAGCTGGAGCT
TGTATTGATTTGAAATTATGGCCTAGTAACCCGCGTAAAATTGATTTTCTTGGTCAAATGAAGACTTTTCTTGGA
CAGAATAACGCTTTAGATCCCAATACCACACTATACAGTATATTTTTCGGAATCAACGACTATCTCGCCTCACTC
ATTGACGGCGATCATTTGACCGAAGCAGCACAAGTCCTCCTTGACCAAATCAAGATTCTAGCTTCTCCACCTACA
AACGCTCGTAAATTCATGGTTTTAGACGTTTACGGTCGAGGAACAACTATTCCTTCTGGTGAAACTTTCAAACAA
ATCATTTATTCTGGTTTAAGTTCTTTTCGAGTCAATGGTATCCAAATCATCAATGACGACAAACATCAACCTCAA
CGTGTGACTCTGGATATCTCATATATCAACTTTGCTAATATATGGAAGGGAGTTCTTGGTCCTAATCCTGGGTTT
GAGAAATTTGGATATGTGAGTGAGGACGCGTGTACGAAGTGTACGGCAGAGTTGGGGTGTACGACTATTGGGATG
TGTGATGATCCTGAACATTATTTTTATTGGATTCCTGGACATCCGTCGAAGGAGACTATGAGGATTATGGCGGAT
TATGTGAGGGAGGTTTGGGATCAATGTGGAGTCTAG
Transcript >AgabiH97|079100
ATGTATCTCGACTCCCTCGCCATTATCATTGCCTTTGCTCGTATCCTCTCCGCCTCTTTTCTCAACCAAATTCCA
TTCCCAGCACCCCCTCCAAACGGCGACATCCATCTCGCCATCAATCCAACCTGTGGTCAACTTTCTGGCGACACT
GCAGATATCAATGCTGGTATAGACAAACACTCAATCAAGACCATAATCTCGTTCGGAGACAGTTACACCGACGGT
GGTAAATCCGACGGATCACCACTCGATCCTCCTATCCTAGTCTTCCCCAATCCTCTCGCAGGTGGCAGATCCACC
AACGGCCTAACCTGGGTCGAGAACGTTGCAAACGACCTTAACGCAACCATCAAAGACTACGCACAAGCTGGAGCT
TGTATTGATTTGAAATTATGGCCTAGTAACCCGCGTAAAATTGATTTTCTTGGTCAAATGAAGACTTTTCTTGGA
CAGAATAACGCTTTAGATCCCAATACCACACTATACAGTATATTTTTCGGAATCAACGACTATCTCGCCTCACTC
ATTGACGGCGATCATTTGACCGAAGCAGCACAAGTCCTCCTTGACCAAATCAAGATTCTAGCTTCTCCACCTACA
AACGCTCGTAAATTCATGGTTTTAGACGTTTACGGTCGAGGAACAACTATTCCTTCTGGTGAAACTTTCAAACAA
ATCATTTATTCTGGTTTAAGTTCTTTTCGAGTCAATGGTATCCAAATCATCAATGACGACAAACATCAACCTCAA
CGTGTGACTCTGGATATCTCATATATCAACTTTGCTAATATATGGAAGGGAGTTCTTGGTCCTAATCCTGGGTTT
GAGAAATTTGGATATGTGAGTGAGGACGCGTGTACGAAGTGTACGGCAGAGTTGGGGTGTACGACTATTGGGATG
TGTGATGATCCTGAACATTATTTTTATTGGATTCCTGGACATCCGTCGAAGGAGACTATGAGGATTATGGCGGAT
TATGTGAGGGAGGTTTGGGATCAATGTGGAGTCTAG
Gene >AgabiH97|079100
ATGTATCTCGACTCCCTCGCCATTATCATTGCCTTTGCTCGTATCCTCTCCGCCTCTTTTCTCAACCAAATTCCA
TTCCCAGCACCCCCTCCAAACGGCGACATCCATCTCGCCATCAATCCAACCTGTGGTCAACTTTCTGGCGACACT
GCAGATATCAATGCTGGTATAGACAAACACTCAATCAAGACCATAATCTCGTTCGGAGCAAGTTCATTATTTCCT
ACAAACAACCGTCTCTCAACGTTAGACAGGACAGTTACACCGACGGTGGTAAATCCGACGGATCACCACTCGATC
CTCCTATCCTAGTCTTCCCCAATCCTCTCGCAGGTGGCAGATCCACCAACGGCCTAACCTGGGTCGAGAACGTTG
CAAACGACCTTAACGCAACCATCAAAGACTACGCAGTCAGTTTTTCTTCTTTCACGATATTCTTAGAAATTACTG
AATTGCTAGATATAGCAAGCTGGAGCTTGTATTGATTTGAAATTATGGCCTAGTAACCCGCGTAAAATTGATTTT
CTTGGTCAAAGTAAGAGAAACGCGAGTTTGAGATGTTTATGTGCTGATGGATTGGTAGTGAAGACTTTTCTTGGA
CAGAATAACGCTTTAGATCCCAATACCACACTATACAGTATATTTTTCGGAATCAAGTAAGTCTGCACACTCTTA
CCTCTTCGTGTTTTTAAACTCAAGCTTTTTCAACATAGCGACTATCTCGCCTCACTCAGTCAGTCAAACCAAAAA
ACAATTTCTTTTCTCAACTAAAATCTAAACCCTATTTACAGTTGACGGCGATCATTTGACCGAAGCAGCACAAGT
CCTCCTTGACCAAATCAAGATTCTAGCTTCTCCACCTACAAACGCTCGTAAATTCATGGTTTTAGACGTTTACGG
TCGAGGAACAACTATTCCTTCTGGTGAAACTTTCAAACAAATCATTTATTCTGGTTTAAGTTCTTTTCGAGTCAA
TGGTATCCAAATCATCAATGACGACAAACATCAACCTCAACGTGTGACTCTGGATATCTCATATATCAACTTTGC
TAATATATGGAAGGGAGTTCTTGGTCCTAATCCTGGGTTTGAGAAATTTGGATATGTGAGTGAGGACGCGTGTAC
GAAGTGTACGGCAGAGTTGGGGTGTACGACTATTGGGATGTGTGATGATCCTGAACATTATTTTTATTGGATTCC
TGGGTGAGTTTTTGCTATGAATATATATATATATATACGATGATGGTTGATGGTTTGGGATTTCAAAGACATCCG
TCGAAGGAGACTATGAGGATTATGGCGGATTATGTGAGGGAGGTTTGGGATCAATGTGGAGTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail