© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|078870 |
| Gene name | |
| Location | scaffold_5:167102..169071 |
| Strand | - |
| Gene length (bp) | 1969 |
| Transcript length (bp) | 1530 |
| Coding sequence length (bp) | 1530 |
| Protein length (aa) | 510 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.2E-37 | 29 | 433 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 3.2E-08 | 37 | 291 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 28 | 494 | 1.0E-29 |
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 21 | 464 | 6.0E-28 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 46 | 456 | 1.0E-27 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 46 | 456 | 1.0E-27 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 46 | 436 | 2.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 28 | 494 | 1.0E-29 |
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 21 | 464 | 6.0E-28 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 46 | 456 | 1.0E-27 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 46 | 456 | 1.0E-27 |
| sp|P39886|TCMA_STRGA | Tetracenomycin C resistance and export protein OS=Streptomyces glaucescens GN=tcmA PE=3 SV=1 | 46 | 436 | 2.0E-23 |
| sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 18 | 448 | 1.0E-20 |
| sp|Q04733|CMCT_AMYLA | Cephamycin export protein CmcT OS=Amycolatopsis lactamdurans GN=cmcT PE=3 SV=1 | 26 | 332 | 3.0E-20 |
| sp|P9WG90|STP_MYCTO | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=stp PE=3 SV=1 | 34 | 440 | 4.0E-20 |
| sp|P46105|ACT22_STRCO | Probable actinorhodin transporter OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=actII-2 PE=3 SV=1 | 3 | 436 | 3.0E-19 |
| sp|P9WG91|STP_MYCTU | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=stp PE=1 SV=1 | 34 | 440 | 6.0E-19 |
| sp|P0A0J9|QACA_STAAU | Antiseptic resistance protein OS=Staphylococcus aureus GN=qacA PE=1 SV=1 | 12 | 457 | 7.0E-19 |
| sp|P0A0J8|QACA_STAAM | Antiseptic resistance protein OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=qacA PE=3 SV=1 | 12 | 457 | 7.0E-19 |
| sp|Q00538|MMR_BACSU | Methylenomycin A resistance protein OS=Bacillus subtilis (strain 168) GN=mmr PE=3 SV=1 | 19 | 479 | 1.0E-18 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 20 | 290 | 2.0E-16 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 8 | 452 | 6.0E-16 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 8 | 452 | 6.0E-16 |
| sp|Q03263|YM8M_YEAST | Uncharacterized transporter YMR279C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR279C PE=1 SV=1 | 22 | 493 | 8.0E-16 |
| sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 25 | 448 | 2.0E-15 |
| sp|P34698|Y5813_SACEN | Uncharacterized MFS-type transporter SACE_5813 OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) GN=SACE_5813 PE=3 SV=2 | 21 | 436 | 8.0E-15 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 63 | 460 | 2.0E-14 |
| sp|Q8Y9K8|LMRB_LISMO | Lincomycin resistance protein LmrB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmrB PE=3 SV=1 | 11 | 448 | 2.0E-14 |
| sp|Q92EE1|LMRB_LISIN | Lincomycin resistance protein LmrB OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lmrB PE=3 SV=1 | 11 | 448 | 2.0E-14 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 63 | 460 | 8.0E-14 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 10 | 369 | 1.0E-13 |
| sp|P11545|MMR_STRCO | Methylenomycin A resistance protein OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=mmr PE=3 SV=1 | 17 | 454 | 2.0E-13 |
| sp|P0AEJ0|EMRB_ECOLI | Multidrug export protein EmrB OS=Escherichia coli (strain K12) GN=emrB PE=1 SV=1 | 12 | 448 | 7.0E-13 |
| sp|P0AEJ1|EMRB_ECO57 | Multidrug export protein EmrB OS=Escherichia coli O157:H7 GN=emrB PE=3 SV=1 | 12 | 448 | 7.0E-13 |
| sp|P46104|LMRA_STRLN | Lincomycin resistance protein OS=Streptomyces lincolnensis GN=lmrA PE=3 SV=1 | 24 | 440 | 2.0E-12 |
| sp|Q9USN4|YJA1_SCHPO | Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 | 6 | 219 | 2.0E-12 |
| sp|P52600|EMRY_ECOLI | Probable multidrug resistance protein EmrY OS=Escherichia coli (strain K12) GN=emrY PE=2 SV=1 | 27 | 397 | 1.0E-11 |
| sp|P13090|ATR1_YEAST | Aminotriazole resistance protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATR1 PE=1 SV=2 | 25 | 275 | 2.0E-11 |
| sp|O35018|LMRB_BACSU | Lincomycin resistance protein LmrB OS=Bacillus subtilis (strain 168) GN=lmrB PE=3 SV=1 | 11 | 443 | 3.0E-11 |
| sp|P96712|BMR3_BACSU | Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168) GN=bmr3 PE=1 SV=1 | 46 | 444 | 3.0E-11 |
| sp|A8GHR1|MDTD_SERP5 | Putative multidrug resistance protein MdtD OS=Serratia proteamaculans (strain 568) GN=mdtD PE=3 SV=1 | 34 | 373 | 1.0E-10 |
| sp|A7FG15|MDTD_YERP3 | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|Q1C5L8|MDTD_YERPA | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|B2K9M2|MDTD_YERPB | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|Q7CJL1|MDTD_YERPE | Putative multidrug resistance protein MdtD OS=Yersinia pestis GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|A9QZU7|MDTD_YERPG | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|A4TMR4|MDTD_YERPP | Putative multidrug resistance protein MdtD OS=Yersinia pestis (strain Pestoides F) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|B1JSD2|MDTD_YERPY | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|P31474|HSRA_ECOLI | Probable transport protein HsrA OS=Escherichia coli (strain K12) GN=hsrA PE=1 SV=1 | 28 | 452 | 1.0E-10 |
| sp|Q6D2A9|MDTD_PECAS | Putative multidrug resistance protein MdtD OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=mdtD PE=3 SV=1 | 28 | 485 | 1.0E-10 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 17 | 329 | 1.0E-10 |
| sp|Q1CK62|MDTD_YERPN | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdtD PE=3 SV=1 | 34 | 271 | 1.0E-10 |
| sp|Q668C4|MDTD_YERPS | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mdtD PE=3 SV=1 | 34 | 271 | 2.0E-10 |
| sp|A8AEE4|MDTD_CITK8 | Putative multidrug resistance protein MdtD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtD PE=3 SV=1 | 33 | 358 | 8.0E-10 |
| sp|C6DBD0|MDTD_PECCP | Putative multidrug resistance protein MdtD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdtD PE=3 SV=1 | 28 | 501 | 8.0E-10 |
| sp|A1JKW8|MDTD_YERE8 | Putative multidrug resistance protein MdtD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=mdtD PE=3 SV=2 | 34 | 272 | 3.0E-09 |
| sp|P94422|YCNB_BACSU | Uncharacterized MFS-type transporter YcnB OS=Bacillus subtilis (strain 168) GN=ycnB PE=3 SV=1 | 10 | 453 | 4.0E-09 |
| sp|P37594|SMVA_SALTY | Methyl viologen resistance protein SmvA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=smvA PE=3 SV=2 | 21 | 381 | 9.0E-09 |
| sp|D0ZXQ3|SMVA_SALT1 | Methyl viologen resistance protein SmvA OS=Salmonella typhimurium (strain 14028s / SGSC 2262) GN=smvA PE=1 SV=1 | 21 | 381 | 9.0E-09 |
| sp|B5XPB7|MDTD_KLEP3 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae (strain 342) GN=mdtD PE=3 SV=1 | 33 | 391 | 1.0E-08 |
| sp|P44903|HSRA_HAEIN | Probable transport protein HsrA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hsrA PE=3 SV=1 | 115 | 440 | 2.0E-08 |
| sp|P94574|YWOD_BACSU | Uncharacterized MFS-type transporter YwoD OS=Bacillus subtilis (strain 168) GN=ywoD PE=3 SV=1 | 17 | 233 | 6.0E-08 |
| sp|P23054|TCRB_BACSU | Tetracycline resistance protein OS=Bacillus subtilis (strain 168) GN=tetB PE=3 SV=1 | 19 | 241 | 7.0E-08 |
| sp|B5FMU8|MDTD_SALDC | Putative multidrug resistance protein MdtD OS=Salmonella dublin (strain CT_02021853) GN=mdtD PE=3 SV=1 | 33 | 246 | 1.0E-07 |
| sp|O42922|YBIH_SCHPO | Uncharacterized MFS-type transporter C16A3.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.17c PE=3 SV=1 | 10 | 367 | 1.0E-07 |
| sp|A6TBH6|MDTD_KLEP7 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdtD PE=3 SV=1 | 33 | 362 | 1.0E-07 |
| sp|P9WG85|Y1877_MYCTU | Uncharacterized MFS-type transporter Rv1877 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1877 PE=3 SV=1 | 17 | 435 | 1.0E-07 |
| sp|A4WCC3|MDTD_ENT38 | Putative multidrug resistance protein MdtD OS=Enterobacter sp. (strain 638) GN=mdtD PE=3 SV=1 | 33 | 292 | 1.0E-07 |
| sp|P9WG84|Y1877_MYCTO | Uncharacterized MFS-type transporter MT1926 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1926 PE=3 SV=1 | 17 | 435 | 1.0E-07 |
| sp|Q8Z5F5|MDTD_SALTI | Putative multidrug resistance protein MdtD OS=Salmonella typhi GN=mdtD PE=3 SV=1 | 33 | 246 | 2.0E-07 |
| sp|B4SXW2|MDTD_SALNS | Putative multidrug resistance protein MdtD OS=Salmonella newport (strain SL254) GN=mdtD PE=3 SV=1 | 33 | 246 | 3.0E-07 |
| sp|B5R0C2|MDTD_SALEP | Putative multidrug resistance protein MdtD OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtD PE=3 SV=1 | 33 | 246 | 3.0E-07 |
| sp|B5EXV9|MDTD_SALA4 | Putative multidrug resistance protein MdtD OS=Salmonella agona (strain SL483) GN=mdtD PE=3 SV=1 | 33 | 246 | 3.0E-07 |
| sp|B5BF67|MDTD_SALPK | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtD PE=3 SV=1 | 33 | 246 | 3.0E-07 |
| sp|Q5PDW9|MDTD_SALPA | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=mdtD PE=3 SV=1 | 33 | 246 | 3.0E-07 |
| sp|Q8ZNQ0|MDTD_SALTY | Putative multidrug resistance protein MdtD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=mdtD PE=3 SV=1 | 33 | 246 | 4.0E-07 |
| sp|P0A4K7|TCR_BACCE | Tetracycline resistance protein OS=Bacillus cereus GN=tet PE=3 SV=1 | 21 | 245 | 5.0E-07 |
| sp|P07561|TCR_GEOSE | Tetracycline resistance protein OS=Geobacillus stearothermophilus GN=tet PE=3 SV=1 | 21 | 245 | 5.0E-07 |
| sp|P0A4K8|TCR_BACIU | Tetracycline resistance protein OS=Bacillus subtilis GN=tet PE=3 SV=1 | 21 | 245 | 5.0E-07 |
| sp|P0A4K6|TCR_STREE | Tetracycline resistance protein OS=Streptococcus pneumoniae GN=tet PE=3 SV=1 | 21 | 245 | 5.0E-07 |
| sp|O74395|STR1_SCHPO | Siderophore iron transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=str1 PE=1 SV=1 | 211 | 444 | 1.0E-06 |
| sp|O31563|YFIU_BACSU | Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis (strain 168) GN=yfiU PE=3 SV=1 | 35 | 241 | 1.0E-06 |
| sp|B7LV41|MDTD_ESCF3 | Putative multidrug resistance protein MdtD OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mdtD PE=3 SV=1 | 33 | 505 | 2.0E-06 |
| sp|P62967|TCR_STAES | Tetracycline resistance protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tet PE=3 SV=1 | 29 | 241 | 3.0E-06 |
| sp|P02983|TCR_STAAU | Tetracycline resistance protein OS=Staphylococcus aureus GN=tet PE=3 SV=3 | 29 | 241 | 3.0E-06 |
| sp|P9WJW9|Y2459_MYCTU | Uncharacterized MFS-type transporter Rv2459 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2459 PE=3 SV=1 | 19 | 192 | 5.0E-06 |
| sp|P9WJW8|Y2459_MYCTO | Uncharacterized MFS-type transporter MT2534 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2534 PE=3 SV=1 | 19 | 192 | 5.0E-06 |
| sp|B7MWZ0|MDTD_ECO81 | Putative multidrug resistance protein MdtD OS=Escherichia coli O81 (strain ED1a) GN=mdtD PE=3 SV=1 | 33 | 505 | 6.0E-06 |
| sp|A9N7L0|MDTD_SALPB | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtD PE=3 SV=1 | 28 | 366 | 7.0E-06 |
| sp|B4T9U3|MDTD_SALHS | Putative multidrug resistance protein MdtD OS=Salmonella heidelberg (strain SL476) GN=mdtD PE=3 SV=1 | 28 | 366 | 7.0E-06 |
| sp|Q0T353|MDTD_SHIF8 | Putative multidrug resistance protein MdtD OS=Shigella flexneri serotype 5b (strain 8401) GN=mdtD PE=3 SV=2 | 33 | 246 | 1.0E-05 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 23 | 45 | 22 |
| 2 | 61 | 80 | 19 |
| 3 | 90 | 109 | 19 |
| 4 | 116 | 138 | 22 |
| 5 | 151 | 173 | 22 |
| 6 | 180 | 202 | 22 |
| 7 | 222 | 239 | 17 |
| 8 | 252 | 269 | 17 |
| 9 | 289 | 311 | 22 |
| 10 | 318 | 340 | 22 |
| 11 | 355 | 374 | 19 |
| 12 | 381 | 403 | 22 |
| 13 | 418 | 440 | 22 |
| 14 | 460 | 479 | 19 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 5.29 | 1.90 | 8.67 |
| Initials | Initials knots | 11.20 | 5.72 | 16.69 |
| Pileal_Stipeal_center | Stage I stipe center | 4.89 | 2.18 | 7.59 |
| Pileal_Stipeal_shell | Stage I stipe shell | 3.08 | 1.20 | 4.95 |
| DIF_stipe_center | Stage II stipe center | 3.40 | 1.37 | 5.43 |
| DIF_stipe_shell | Stage II stipe shell | 4.70 | 1.87 | 7.53 |
| DIF_stipe_skin | Stage II stipe skin | 4.25 | 1.83 | 6.67 |
| DIF_cap_skin | Stage II cap skin | 1.26 | 0.37 | 2.15 |
| DIF_cap_tissue | Stage II cap tissue | 1.31 | 0.41 | 2.21 |
| DIF_gill_tissue | Stage II gill tissue | 2.56 | 1.03 | 4.10 |
| YFB_stipe_center | Young fruiting body stipe center | 2.40 | 0.93 | 3.87 |
| YFB_stipe_shell | Young fruiting body stipe shell | 2.45 | 0.95 | 3.95 |
| YFB_stipe_skin | Young fruiting body stipe skin | 3.50 | 1.47 | 5.54 |
| YFB_cap_skin | Young fruiting body cap skin | 1.40 | 0.45 | 2.35 |
| YFB_cap_tissue | Young fruiting body cap tissue | 1.18 | 0.36 | 2.00 |
| YFB_gill_tissue | Young fruiting body gill tissue | 3.04 | 1.26 | 4.82 |
| YFB_veil | Young fruiting body veil | 3.16 | 1.26 | 5.07 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.082633 | no |
| Casing | YFB_stipe_center | 0.048422 | yes |
| Casing | YFB_stipe_shell | 0.053965 | no |
| Casing | YFB_stipe_skin | 0.388312 | no |
| Casing | YFB_cap_skin | 0.002084 | yes |
| Casing | YFB_cap_tissue | 0.000613 | yes |
| Casing | YFB_gill_tissue | 0.193249 | no |
| Casing | YFB_veil | 0.261654 | no |
| Casing | Initials | 0.042475 | yes |
| Casing | Pileal_Stipeal_center | 0.916251 | no |
| Casing | Pileal_Stipeal_shell | 0.218856 | no |
| Casing | DIF_stipe_center | 0.351410 | no |
| Casing | DIF_stipe_shell | 0.870539 | no |
| Casing | DIF_stipe_skin | 0.716320 | no |
| Casing | DIF_cap_skin | 0.000613 | yes |
| Casing | DIF_cap_tissue | 0.001625 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.932911 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.955047 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.554020 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.207043 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.089130 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.791203 | no |
| DIF_gill_tissue | YFB_veil | 0.742098 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.980444 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.446415 | no |
| YFB_stipe_center | YFB_cap_skin | 0.276999 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.121717 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.684557 | no |
| YFB_stipe_center | YFB_veil | 0.635435 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.481285 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.257979 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.112109 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.718104 | no |
| YFB_stipe_shell | YFB_veil | 0.665514 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.030610 | yes |
| YFB_stipe_skin | YFB_cap_tissue | 0.011041 | yes |
| YFB_stipe_skin | YFB_gill_tissue | 0.827521 | no |
| YFB_stipe_skin | YFB_veil | 0.888180 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.834420 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.080179 | no |
| YFB_cap_skin | YFB_veil | 0.069387 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.023676 | yes |
| YFB_cap_tissue | YFB_veil | 0.020260 | yes |
| YFB_gill_tissue | YFB_veil | 0.959660 | no |
| Initials | DIF_gill_tissue | 0.000613 | yes |
| Initials | YFB_stipe_center | 0.000613 | yes |
| Initials | YFB_stipe_shell | 0.000613 | yes |
| Initials | YFB_stipe_skin | 0.000613 | yes |
| Initials | YFB_cap_skin | 0.000613 | yes |
| Initials | YFB_cap_tissue | 0.000613 | yes |
| Initials | YFB_gill_tissue | 0.000613 | yes |
| Initials | YFB_veil | 0.000613 | yes |
| Initials | Pileal_Stipeal_center | 0.012274 | yes |
| Initials | Pileal_Stipeal_shell | 0.000613 | yes |
| Initials | DIF_stipe_center | 0.001625 | yes |
| Initials | DIF_stipe_shell | 0.012577 | yes |
| Initials | DIF_stipe_skin | 0.007092 | yes |
| Initials | DIF_cap_skin | 0.000613 | yes |
| Initials | DIF_cap_tissue | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.107122 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.066956 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.076262 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.488048 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.002525 | yes |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.001140 | yes |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.262789 | no |
| Pileal_Stipeal_center | YFB_veil | 0.340629 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.291439 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.448266 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.959864 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.829855 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.000613 | yes |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.003765 | yes |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.785355 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.680183 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.711887 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.852733 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.077161 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.028675 | yes |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.987573 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.972310 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.894899 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.377517 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.539190 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.035076 | yes |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.064892 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.621675 | no |
| DIF_stipe_center | YFB_stipe_center | 0.507128 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.536769 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.970108 | no |
| DIF_stipe_center | YFB_cap_skin | 0.042475 | yes |
| DIF_stipe_center | YFB_cap_tissue | 0.013485 | yes |
| DIF_stipe_center | YFB_gill_tissue | 0.872193 | no |
| DIF_stipe_center | YFB_veil | 0.926302 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.535495 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.706008 | no |
| DIF_stipe_center | DIF_cap_skin | 0.019169 | yes |
| DIF_stipe_center | DIF_cap_tissue | 0.038278 | yes |
| DIF_stipe_shell | DIF_gill_tissue | 0.151108 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.102350 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.109929 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.575213 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.004160 | yes |
| DIF_stipe_shell | YFB_cap_tissue | 0.002525 | yes |
| DIF_stipe_shell | YFB_gill_tissue | 0.339569 | no |
| DIF_stipe_shell | YFB_veil | 0.423618 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.889953 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.000613 | yes |
| DIF_stipe_shell | DIF_cap_tissue | 0.004928 | yes |
| DIF_stipe_skin | DIF_gill_tissue | 0.257070 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.181569 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.196516 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.749646 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.006387 | yes |
| DIF_stipe_skin | YFB_cap_tissue | 0.002951 | yes |
| DIF_stipe_skin | YFB_gill_tissue | 0.503635 | no |
| DIF_stipe_skin | YFB_veil | 0.589351 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.001625 | yes |
| DIF_stipe_skin | DIF_cap_tissue | 0.008791 | yes |
| DIF_cap_skin | DIF_gill_tissue | 0.118547 | no |
| DIF_cap_skin | YFB_stipe_center | 0.166855 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.146063 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.010728 | yes |
| DIF_cap_skin | YFB_cap_skin | 0.904376 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.945852 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.036683 | yes |
| DIF_cap_skin | YFB_veil | 0.031088 | yes |
| DIF_cap_skin | DIF_cap_tissue | 0.967740 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.166056 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.222361 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.199377 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.027205 | yes |
| DIF_cap_tissue | YFB_cap_skin | 0.944320 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.909839 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.066207 | no |
| DIF_cap_tissue | YFB_veil | 0.054982 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|078870 MALPTKGPPEDKEFSALPTARKIILLIILCLAQFLDTFAISALFAAIPQISVQLGISDGDSVWLISGYQLTFASL MLGGGRLSDLYNPKYNFLAGGAILAVFSLAGGFVRKQIPLFILRALMGIGAAVNVPSALYIIIHLFPEPTSQAKA VALFGICGALGNVIGLVIGAFIVNWATWPWIFYMFAIFGAVLFTGVLILCPSPKGAPLSALDKAKRFKRLDIIGV FLMAVGLILFIFGVTSGSTTGWDSARCLAPFLISFIFLIGFFFWEARIPEEMAAIPPSLWRVENFAIIAGCATMP IMWWATVQLLYSWIWQNVYGWSPIMTAVRFLPLGVLGFIMSPLTTSLQQRFSNKWILLVGHLLALIGTALFPFGD SPQHYWRFVFVGFCIGTTGVLIVYTIVSIDIFAVTSPEQAGVVGSIFNCFLQLGSAAGSAIATSIQTSVDKTHGG PTSWTGRKAAFWFLFALLVIETICVFVFMHDTLPRPKPRIEEEHSDIPEKEHTDKLEKA* |
| Coding | >AgabiH97|078870 ATGGCTCTTCCAACAAAAGGTCCGCCTGAAGATAAAGAGTTCTCTGCTTTGCCCACCGCCAGAAAAATCATCCTC TTAATTATTTTATGTCTGGCCCAATTTCTCGATACATTTGCGATCAGTGCTCTCTTTGCCGCGATCCCACAAATT TCCGTGCAACTTGGTATCTCGGATGGCGACTCTGTCTGGCTTATTAGTGGCTATCAGCTAACTTTCGCATCCCTT ATGCTCGGTGGCGGACGATTAAGCGATCTCTACAACCCCAAATATAATTTTCTTGCGGGTGGTGCAATACTTGCA GTATTTTCTCTAGCCGGAGGGTTTGTGAGAAAACAAATCCCCTTGTTTATCTTGCGAGCTTTGATGGGCATCGGG GCAGCCGTGAACGTGCCCTCGGCCTTGTATATCATCATCCACCTATTCCCAGAACCAACATCTCAAGCCAAAGCC GTGGCCTTGTTCGGCATCTGCGGAGCTCTCGGTAATGTCATTGGACTTGTTATTGGCGCTTTTATCGTGAATTGG GCAACATGGCCTTGGATATTCTACATGTTTGCAATCTTTGGGGCAGTTCTGTTCACCGGAGTGTTGATTCTATGT CCTTCTCCTAAGGGGGCACCTCTATCCGCTCTCGACAAAGCAAAGCGTTTTAAACGTCTGGACATAATTGGAGTA TTTTTGATGGCAGTTGGCCTTATACTTTTTATATTCGGTGTGACGAGTGGTTCGACGACCGGTTGGGATAGCGCA CGATGCTTAGCTCCGTTCCTCATTTCATTTATCTTCCTCATTGGATTCTTTTTCTGGGAGGCGCGTATCCCAGAA GAGATGGCTGCCATTCCCCCAAGCCTCTGGCGAGTGGAAAACTTCGCCATCATTGCAGGATGTGCTACTATGCCA ATCATGTGGTGGGCTACTGTTCAGTTATTGTACTCATGGATTTGGCAGAACGTGTATGGCTGGTCACCCATCATG ACGGCAGTCCGCTTTCTTCCCCTCGGGGTGTTAGGCTTCATAATGAGCCCATTGACGACTTCCCTTCAGCAGAGA TTCTCGAATAAATGGATCCTTTTAGTGGGACACCTCTTGGCTCTCATTGGAACAGCACTTTTTCCTTTCGGTGAC TCACCTCAACACTATTGGCGCTTCGTATTTGTTGGATTTTGTATTGGTACTACTGGTGTCCTTATTGTCTACACC ATAGTTAGTATTGATATCTTTGCCGTTACATCTCCTGAGCAAGCAGGCGTTGTCGGCTCAATTTTCAATTGTTTC CTGCAGCTTGGAAGCGCAGCTGGAAGTGCTATAGCCACTTCTATACAGACGAGTGTTGACAAGACTCACGGTGGA CCTACTTCATGGACAGGACGTAAAGCCGCTTTCTGGTTCCTCTTTGCCCTACTCGTCATCGAAACCATATGTGTG TTCGTATTCATGCATGATACACTGCCACGACCGAAGCCCAGAATCGAGGAGGAGCATTCTGATATCCCGGAGAAG GAGCATACCGATAAACTAGAGAAGGCGTAG |
| Transcript | >AgabiH97|078870 ATGGCTCTTCCAACAAAAGGTCCGCCTGAAGATAAAGAGTTCTCTGCTTTGCCCACCGCCAGAAAAATCATCCTC TTAATTATTTTATGTCTGGCCCAATTTCTCGATACATTTGCGATCAGTGCTCTCTTTGCCGCGATCCCACAAATT TCCGTGCAACTTGGTATCTCGGATGGCGACTCTGTCTGGCTTATTAGTGGCTATCAGCTAACTTTCGCATCCCTT ATGCTCGGTGGCGGACGATTAAGCGATCTCTACAACCCCAAATATAATTTTCTTGCGGGTGGTGCAATACTTGCA GTATTTTCTCTAGCCGGAGGGTTTGTGAGAAAACAAATCCCCTTGTTTATCTTGCGAGCTTTGATGGGCATCGGG GCAGCCGTGAACGTGCCCTCGGCCTTGTATATCATCATCCACCTATTCCCAGAACCAACATCTCAAGCCAAAGCC GTGGCCTTGTTCGGCATCTGCGGAGCTCTCGGTAATGTCATTGGACTTGTTATTGGCGCTTTTATCGTGAATTGG GCAACATGGCCTTGGATATTCTACATGTTTGCAATCTTTGGGGCAGTTCTGTTCACCGGAGTGTTGATTCTATGT CCTTCTCCTAAGGGGGCACCTCTATCCGCTCTCGACAAAGCAAAGCGTTTTAAACGTCTGGACATAATTGGAGTA TTTTTGATGGCAGTTGGCCTTATACTTTTTATATTCGGTGTGACGAGTGGTTCGACGACCGGTTGGGATAGCGCA CGATGCTTAGCTCCGTTCCTCATTTCATTTATCTTCCTCATTGGATTCTTTTTCTGGGAGGCGCGTATCCCAGAA GAGATGGCTGCCATTCCCCCAAGCCTCTGGCGAGTGGAAAACTTCGCCATCATTGCAGGATGTGCTACTATGCCA ATCATGTGGTGGGCTACTGTTCAGTTATTGTACTCATGGATTTGGCAGAACGTGTATGGCTGGTCACCCATCATG ACGGCAGTCCGCTTTCTTCCCCTCGGGGTGTTAGGCTTCATAATGAGCCCATTGACGACTTCCCTTCAGCAGAGA TTCTCGAATAAATGGATCCTTTTAGTGGGACACCTCTTGGCTCTCATTGGAACAGCACTTTTTCCTTTCGGTGAC TCACCTCAACACTATTGGCGCTTCGTATTTGTTGGATTTTGTATTGGTACTACTGGTGTCCTTATTGTCTACACC ATAGTTAGTATTGATATCTTTGCCGTTACATCTCCTGAGCAAGCAGGCGTTGTCGGCTCAATTTTCAATTGTTTC CTGCAGCTTGGAAGCGCAGCTGGAAGTGCTATAGCCACTTCTATACAGACGAGTGTTGACAAGACTCACGGTGGA CCTACTTCATGGACAGGACGTAAAGCCGCTTTCTGGTTCCTCTTTGCCCTACTCGTCATCGAAACCATATGTGTG TTCGTATTCATGCATGATACACTGCCACGACCGAAGCCCAGAATCGAGGAGGAGCATTCTGATATCCCGGAGAAG GAGCATACCGATAAACTAGAGAAGGCGTAG |
| Gene | >AgabiH97|078870 ATGGCTCTTCCAACAAAAGGTCCGCCTGAAGATAAAGAGTTCTCTGCTTTGCCCACCGCCAGAAAAATCATCCTC TTAATTATTTTATGTCTGGCCCAATTTCTCGATACATTTGCGATCAGTGCTCTCTTTGCCGCGATCCCACAAATT TCCGTGCAACTTGGTATCTCGGATGGCGACTCTGTCTGGCTTATTAGTGGCTATCAGCTAACTTTCGCATCCCTT ATGCTCGGTGTAAGGATACGCTCCTCGTTATAGCCCCTCCGACTAACTAGGTATTTTAGGGCGGACGATTAAGCG ATCTCTACAACCCCAGTACGACCTTGATCTCTCAGTTGCACCTACGAGCCTAACCGCTGTAATAGAATATAATTT TCTTGCGGGTGGTGCAATACTTGCAGTATTTTCTCTAGCCGGAGGGTTTGTGAGAAAACAAATCCCCTTGTTTAT CTTGCGAGCTTTGATGGGCATCGGTATGATTAATCTATCCTCCTTCAAGAATGTATGACTGAGATTTTAACAGGG GCAGCCGTGAACGTGCCCTCGGCCTTGTATATCATCATCCACCTATTCCCAGAACCAACATCTCAAGCCAAAGCC GTGGCCTTGTTCGGCATCTGCGGAGCTCTCGGTAATGGTGCGTTCCTTATACAAATTTGGTAAACGTTCAAAGAC GTAATCATTCCCCTTTTGTTGACAGTCATTGGACTTGTTATTGGCGCTTTTATCGTGAATTGGGCAACATGGCCT TGGATATTCTACATGTTTGCAATCTTTGGGGCAGTTCTGTTCACCGGAGTGTTGATTCTATGTCCTTCTCCTAAG GGGGCACCTCTATCCGCTCTCGACAAAGCAAAGCGTTTTAAACGTCTGGACATAATTGGAGTATTTTTGATGGCA GGTAAACTCGGCGCATTCGATGGTCACCGACTCGGATAATTGACCGACGTTACCTCCTGCAGTTGGCCTTATACT TTTTATATTCGGTGTGACGAGTGGTTCGACGACCGGTTGGGATAGCGCACGATGCTTAGCTCCGTTCCTCATTTC ATTTATCTTCCTCATTGGATTCTTTTTCTGGGAGGCGCGTATCCCAGAAGAGATGGCTGCCATGTACGTGATATA TGCCGAATGTCTTCTATAATCGTTAACAGTCTCCGCGACGCGTAGTCCCCCAAGCCTCTGGCGAGTGGAAAACTT CGCCATCATTGCAGGATGTGCTACTATGCCAATCATGTGGTGGGCTACTGTTCAGTTATTGTACTCATGGATTTG GCAGAACGTGTATGGCTGGTCACCCATCATGACGGCAGTCCGCTTGTGGGTCATTCCATTATTTGTGGCCAGGTC TTTTATCTTAACGTTATCCAGTCTTCCCCTCGGGGTGTTAGGCTTCATAATGAGCCCATTGACGACTTCCCTTCA GCAGAGATTCTCGAATAAATGGATCCTTTTAGTGGGACACCTCTTGGCTCTCATTGGAACAGCACTTTTTCCTTT CGGTGACTCACCTCAACACTATTGGCGCTTCGTATTTGTTGGATTTTGTATTGGTACTACTGGTGTCCTTATTGT CTACACCATAGTTAGGTATGATATCTACCTACGAAACTCTTCGCATGAATACTCGTACTCACCTTGTTCTAGTAT TGATATCTTTGCCGTTACATCTCCTGAGCAAGCAGGCGTTGTCGGCTCAATTTTCAATTGTTTCCTGCAGCTTGG AAGCGCAGCTGGAAGTGCTATAGCCACTTCTATACAGACGAGTGTTGACAAGACTCACGGTGGACCTACTTCATG GACAGGACGTAAAGCCGCTTTCTGGTTCCTCTTTGCCCTACTCGTCATCGAAACCATATGTGTGTTCGTATTCAT GCATGATACACTGCCACGACCGAAGCCCAGAATCGAGGAGGAGCATTCTGATATCCCGGAGAAGGAGCATACCGA TAAACTAGAGAAGGCGTAG |