Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|078560
Gene name
Location	scaffold_5:83655..84138
Strand	+
Gene length (bp)	483
Transcript length (bp)	483
Coding sequence length (bp)	483
Protein length (aa)	161

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00651	BTB	BTB/POZ domain	5.3E-07	20	122

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|078560 MQAITKSFTPVSKDIFIRGADIVFMTDDGAKFHVHSYFFTRESIYWQQKLTGHNEPHHPLSKHYTPNDPYIIQDV DSHDFRKFLCVFYNTRYGDYSFFSNLDWVDILSIAHKWEFPQVKILSKLYLGKMGYGVVERTCGVYCTRIVDDEM IDRSYPRQVL*
Coding	>AgabiH97\|078560 ATGCAAGCCATTACCAAATCTTTTACACCGGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGATGGAGCCAAATTCCACGTTCATTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCATCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GACTCTCATGATTTTCGAAAATTTCTCTGTGTATTCTATAACACGCGATACGGCGATTACTCTTTCTTTTCCAAC CTTGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACAGGTCAAAATTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTATGGAGTTGTCGAACGAACTTGTGGAGTTTACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCGTCAAGTGTTATGA
Transcript	>AgabiH97\|078560 ATGCAAGCCATTACCAAATCTTTTACACCGGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGATGGAGCCAAATTCCACGTTCATTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCATCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GACTCTCATGATTTTCGAAAATTTCTCTGTGTATTCTATAACACGCGATACGGCGATTACTCTTTCTTTTCCAAC CTTGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACAGGTCAAAATTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTATGGAGTTGTCGAACGAACTTGTGGAGTTTACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCGTCAAGTGTTATGA
Gene	>AgabiH97\|078560 ATGCAAGCCATTACCAAATCTTTTACACCGGTTTCAAAAGACATCTTTATCCGTGGAGCCGACATTGTATTCATG ACCGACGATGGAGCCAAATTCCACGTTCATTCCTACTTCTTCACTCGCGAATCTATCTATTGGCAACAAAAACTC ACCGGCCATAACGAACCTCATCATCCTTTATCCAAACACTATACACCAAACGACCCCTACATCATCCAAGATGTA GACTCTCATGATTTTCGAAAATTTCTCTGTGTATTCTATAACACGCGATACGGCGATTACTCTTTCTTTTCCAAC CTTGACTGGGTCGACATCTTATCAATTGCACACAAATGGGAGTTTCCACAGGTCAAAATTCTTTCCAAACTTTAT CTTGGAAAAATGGGCTATGGAGTTGTCGAACGAACTTGTGGAGTTTACTGTACTCGAATCGTTGACGATGAAATG ATTGACCGTTCTTATCCTCGTCAAGTGTTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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