Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|078330
Gene name
Locationscaffold_5:31364..32432
Strand+
Gene length (bp)1068
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7069 0.5117 0.1509 0.0751 0.3278 0.0109 0.1029 0.2071 0.1048 0.0325

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup10522
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|078330
Agaricus bisporus var bisporus H97 AgabiH97|078330 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|078330
MPDHVELIRTWLDRAGTCSLDLCLRDWLDSSNRGCSEGTEAILKIFVEKSRSWRSIDLVIELRESSILDELEWDS
CPNLETAALSARYWNQETLDTLWAKVHRSPSLRQVNWYRCFQNGLPSHTPWAQLRHIRTLNELSDADIIFLLRAC
PNLRSLDTRYTASLSGRLNSSSIVSHSDLESLFLNVVSHSTPLFDHISLPSLRTLRLTNECSSDPLDIDETIGRP
VEGCLRRSACSLRVLEVFHFDRGNDLTQFLQSILYVPATRDLSRFDLYPLRSDACEHDMLAKHPSQCVRECASAM
ENDRCVPDVNPFLLLDKDSVDEDSIKIEWDLLSPLPENDHTTFTHHHLTQLHFDD*
Coding >AgabiH97|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACGTGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATATTTGTCGAAAAGTCG
AGGTCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGCGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACATCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACGATTGAACTCGTCTTCTATAGTATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCGACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTGTATCCTCTA
CGAAGCGACGCATGCGAACACGATATGTTGGCCAAGCATCCTTCTCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTTTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAACCCAG
CTTCACTTCGATGATTAA
Transcript >AgabiH97|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACGTGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATATTTGTCGAAAAGTCG
AGGTCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGCGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACATCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACGATTGAACTCGTCTTCTATAGTATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCGACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTGTATCCTCTA
CGAAGCGACGCATGCGAACACGATATGTTGGCCAAGCATCCTTCTCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTTTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAACCCAG
CTTCACTTCGATGATTAA
Gene >AgabiH97|078330
ATGCCTGACCATGTGGAGCTTATACGAACGTGGTTGGACCGGGCTGGGACGTGTTCTTTGGACTTATGTCTGCGG
GACTGGTTGGATAGCAGCAATCGAGGGTGCTCGGAAGGCACGGAAGCGATTTTGAAGATATTTGTCGAAAAGTCG
AGGTCGTGGAGAAGTATTGACCTCGTGATTGAACTCCGCGAGTCGTCGATTTTGGATGAGCTCGAGTGGGACTCA
TGTCCTAATCTGGAAACAGCCGCCCTAAGCGCTCGGTATTGGAACCAGGAAACTTTAGACACGCTTTGGGCGAAA
GTTCACCGTAGCCCTTCCCTTCGTCAAGTAAACTGGTATCGGTGCTTCCAAAACGGTCTTCCGTCTCATACTCCC
TGGGCGCAACTGCGGCACATCCGGACCCTCAACGAACTCTCAGATGCAGACATCATTTTCCTTCTTCGAGCTTGT
CCTAATCTTCGTTCCCTGGACACACGGTATACCGCCTCCCTCTCCGGACGATTGAACTCGTCTTCTATAGTATCT
CATAGCGACCTCGAATCTCTTTTCCTCAATGTCGTCAGTCATTCAACCCCTCTTTTCGATCACATTTCTCTCCCC
TCCCTACGGACGCTACGTCTTACCAACGAATGTTCTTCCGACCCCCTTGACATTGACGAGACGATTGGGAGACCT
GTGGAGGGTTGTCTCCGACGATCTGCCTGCTCCCTACGCGTATTAGAAGTTTTCCATTTCGATCGTGGAAATGAT
CTCACGCAGTTCCTGCAATCCATCCTCTACGTCCCTGCGACACGAGATCTGTCTCGTTTCGACCTGTATCCTCTA
CGAAGCGACGCATGCGAACACGATATGTTGGCCAAGCATCCTTCTCAATGTGTTCGTGAATGTGCCTCAGCCATG
GAGAATGACCGATGCGTTCCCGACGTTAACCCATTCCTGCTTTTGGACAAGGATTCCGTGGATGAGGATAGTATC
AAAATTGAATGGGATCTTTTATCACCCTTGCCTGAAAATGATCATACGACATTCACACATCACCATCTAACCCAG
CTTCACTTCGATGATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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