Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|077870
Gene name
Location	scaffold_4:3009212..3010456
Strand	-
Gene length (bp)	1244
Transcript length (bp)	1080
Coding sequence length (bp)	1080
Protein length (aa)	360

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10282	Lactonase	Lactonase, 7-bladed beta-propeller	5.6E-37	6	327

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O34499\|6PGL_BACSU	6-phosphogluconolactonase OS=Bacillus subtilis (strain 168) GN=pgl PE=1 SV=1	14	351	4.0E-09
sp\|D4B0N9\|6PGL_ARTBC	Probable 6-phosphogluconolactonase ARB_02015 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02015 PE=1 SV=1	6	312	3.0E-08
sp\|Q8CRT1\|Y1604_STAES	Uncharacterized protein SE_1604 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1604 PE=3 SV=1	34	348	4.0E-06
sp\|Q5HN15\|Y1457_STAEQ	Uncharacterized protein SERP1457 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1457 PE=3 SV=1	34	348	4.0E-06
sp\|O59681\|YBS1_SCHPO	Uncharacterized protein C18E5.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC18E5.01 PE=3 SV=1	18	229	7.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|077870 MAFRILAGGYDNFVATYLFDPQSSSLSVASRSTTGINPSWLTGHPTNASIFYATNENADGGLQSFTINSDGSLVT QDTVSSGGDSPAFAVALSTGQVAVMNYNTGNGRVVPTNEGLVFEQNAAVEKFPLENSTSVSHPHMALEHGGEIYV PDLGQDKIWRLVQNGSNPSSFVIHGSLPHPLGSGPRHIAIHEDRLFTIHELSSTLTVQAVPASLDETTQITSSVS IIPPDQPQGSQFAAAEILIPSPTSKFPTPYIYVSNRNIGRALDPRGDSIAIFELVNKGTQDESLQLVNQIFTGLT QIRGMEFGPSSQGGEDFLIAAGVVGDAGTVVLQRTDGGRNMTVVSRNADIPTRTSFLWI*
Coding	>AgabiH97\|077870 ATGGCGTTCAGAATCCTTGCCGGAGGATATGACAACTTCGTTGCCACCTATCTATTCGACCCACAATCATCTTCC CTCTCGGTCGCAAGCCGCTCTACAACCGGTATAAATCCATCATGGCTCACGGGCCACCCCACCAATGCGAGCATC TTCTATGCTACCAATGAGAATGCAGATGGCGGTTTACAGTCATTCACCATCAACTCGGATGGATCCCTAGTAACC CAAGATACGGTTTCATCTGGCGGAGACTCGCCGGCATTCGCGGTAGCTCTTTCAACGGGACAAGTTGCGGTGATG AACTATAATACTGGTAACGGGCGTGTGGTTCCTACCAACGAGGGTTTGGTTTTCGAACAAAATGCTGCCGTGGAA AAGTTTCCACTTGAAAATAGTACTTCTGTTTCTCACCCACACATGGCTTTGGAGCACGGAGGTGAGATATATGTC CCAGATTTGGGACAAGACAAGATCTGGCGACTAGTCCAGAACGGGAGCAACCCTAGTTCCTTCGTGATCCATGGA TCCCTTCCTCACCCGCTTGGAAGCGGCCCGCGTCATATTGCCATTCATGAGGATCGATTGTTTACGATACACGAG CTCTCCTCCACATTGACCGTTCAGGCAGTACCGGCTTCACTCGATGAGACTACGCAGATAACTTCCTCGGTGTCA ATCATCCCTCCTGATCAACCTCAAGGTTCACAATTCGCTGCTGCAGAAATCCTTATCCCAAGTCCTACTTCGAAA TTCCCCACTCCCTATATCTACGTCTCAAACAGGAATATTGGGAGAGCACTTGATCCTCGAGGAGATTCCATCGCG ATTTTTGAATTGGTTAACAAGGGAACGCAGGACGAGTCTTTGCAACTCGTTAATCAGATTTTCACAGGCCTCACA CAAATTAGAGGAATGGAATTTGGACCATCGAGTCAAGGCGGAGAAGACTTTTTGATTGCTGCTGGTGTGGTTGGA GATGCGGGAACCGTGGTCTTGCAACGAACTGATGGTGGTAGGAATATGACAGTCGTTTCTAGAAATGCGGACATC CCTACTCGTACCAGTTTCCTTTGGATCTAA
Transcript	>AgabiH97\|077870 ATGGCGTTCAGAATCCTTGCCGGAGGATATGACAACTTCGTTGCCACCTATCTATTCGACCCACAATCATCTTCC CTCTCGGTCGCAAGCCGCTCTACAACCGGTATAAATCCATCATGGCTCACGGGCCACCCCACCAATGCGAGCATC TTCTATGCTACCAATGAGAATGCAGATGGCGGTTTACAGTCATTCACCATCAACTCGGATGGATCCCTAGTAACC CAAGATACGGTTTCATCTGGCGGAGACTCGCCGGCATTCGCGGTAGCTCTTTCAACGGGACAAGTTGCGGTGATG AACTATAATACTGGTAACGGGCGTGTGGTTCCTACCAACGAGGGTTTGGTTTTCGAACAAAATGCTGCCGTGGAA AAGTTTCCACTTGAAAATAGTACTTCTGTTTCTCACCCACACATGGCTTTGGAGCACGGAGGTGAGATATATGTC CCAGATTTGGGACAAGACAAGATCTGGCGACTAGTCCAGAACGGGAGCAACCCTAGTTCCTTCGTGATCCATGGA TCCCTTCCTCACCCGCTTGGAAGCGGCCCGCGTCATATTGCCATTCATGAGGATCGATTGTTTACGATACACGAG CTCTCCTCCACATTGACCGTTCAGGCAGTACCGGCTTCACTCGATGAGACTACGCAGATAACTTCCTCGGTGTCA ATCATCCCTCCTGATCAACCTCAAGGTTCACAATTCGCTGCTGCAGAAATCCTTATCCCAAGTCCTACTTCGAAA TTCCCCACTCCCTATATCTACGTCTCAAACAGGAATATTGGGAGAGCACTTGATCCTCGAGGAGATTCCATCGCG ATTTTTGAATTGGTTAACAAGGGAACGCAGGACGAGTCTTTGCAACTCGTTAATCAGATTTTCACAGGCCTCACA CAAATTAGAGGAATGGAATTTGGACCATCGAGTCAAGGCGGAGAAGACTTTTTGATTGCTGCTGGTGTGGTTGGA GATGCGGGAACCGTGGTCTTGCAACGAACTGATGGTGGTAGGAATATGACAGTCGTTTCTAGAAATGCGGACATC CCTACTCGTACCAGTTTCCTTTGGATCTAA
Gene	>AgabiH97\|077870 ATGGCGTTCAGAATCCTTGCCGGAGGATATGACAACTTCGTTGCCACCTATCTATTCGACCCACAATCATCTTCC CTCTCGGTCGCAAGCCGCTCTACAACCGGTATAAATCCATCATGGCTCACGGGCCACCCCACCAATGCGAGCATC TTCTAGTGAGTATCTGGTAAATCCCTCGTTCCATGATCATCTTCGATAACCACGTGGTTAGTGCTACCAATGAGA ATGCAGATGGCGGTTTACAGTCATTCACCATCAACTCGGATGGATCCCTAGTAACCCAAGATACGGTTTCATCTG GCGGAGACTCGCCGGCATTCGCGGTAGCTCTTTCAACGGGACAAGTTGCGGTGATGAACTATAATACTGGTAACG GGCGTGTGGTTCCTACCAACGAGGGTTTGGTTTTCGAACAAAATGCTGCCGTGGAAAAGTTTCCACTTGAAAATA GTACTTCTGTTTCTCACCCACACATGGCTTTGGAGCACGGAGGTGAGATATATGTCCCAGATTTGGTCAGTAGTT ATTACATCTTCGTTCTGTCCTTGACTGGTGTTCATGTATATTCAAGGGACAAGACAAGATCTGGCGACTAGTCCA GAACGGGAGCAACCCTAGTTCCTTCGTGATCCATGGATCCCTTCCTCACCCGCTTGGAAGCGGCCCGCGTCATAT TGCCATTCATGGTACGTCTTCCCCATTTATATTATCGTTAAGCAAAAGTTGACAACTATGCAGAGGATCGATTGT TTACGATACACGAGCTCTCCTCCACATTGACCGTTCAGGCAGTACCGGCTTCACTCGATGAGACTACGCAGATAA CTTCCTCGGTGTCAATCATCCCTCCTGATCAACCTCAAGGTTCACAATTCGCTGCTGCAGAAATCCTTATCCCAA GTCCTACTTCGAAATTCCCCACTCCCTATATCTACGTCTCAAACAGGAATATTGGGAGAGCACTTGATCCTCGAG GAGATTCCATCGCGATTTTTGAATTGGTTAACAAGGGAACGCAGGACGAGTCTTTGCAACTCGTTAATCAGATTT TCACAGGCCTCACACAAATTAGAGGAATGGAATTTGGACCATCGAGTCAAGGCGGAGAAGACTTTTTGATTGCTG CTGGTGTGGTTGGAGATGCGGGAACCGTGGTCTTGCAACGAACTGATGGTGGTAGGAATATGACAGTCGTTTCTA GAAATGCGGACATCCCTACTCGTACCAGTTTCCTTTGGATCTAA

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