Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|077730
Gene name
Location	scaffold_4:2979274..2981589
Strand	+
Gene length (bp)	2315
Transcript length (bp)	1563
Coding sequence length (bp)	1563
Protein length (aa)	521

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07690	MFS_1	Major Facilitator Superfamily	1.7E-19	23	436
PF06813	Nodulin-like	Nodulin-like	2.1E-12	16	210

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03795\|YM30_YEAST	Uncharacterized membrane protein YMR155W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1 SV=1	14	505	4.0E-29
sp\|Q4IM48\|MCH1_GIBZE	Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1	12	516	3.0E-16
sp\|Q9P3K8\|MCH1_NEUCR	Probable transporter mch1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch1 PE=3 SV=1	7	509	1.0E-15
sp\|Q96TW9\|MCH1_WICAO	Probable transporter MCH1 OS=Wickerhamomyces anomalus GN=MCH1 PE=3 SV=1	281	471	1.0E-10
sp\|Q07376\|MCH1_YEAST	Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MCH1 PE=1 SV=1	19	471	4.0E-06

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q03795\|YM30_YEAST	Uncharacterized membrane protein YMR155W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1 SV=1	14	505	4.0E-29
sp\|Q4IM48\|MCH1_GIBZE	Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1	12	516	3.0E-16
sp\|Q9P3K8\|MCH1_NEUCR	Probable transporter mch1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch1 PE=3 SV=1	7	509	1.0E-15
sp\|Q96TW9\|MCH1_WICAO	Probable transporter MCH1 OS=Wickerhamomyces anomalus GN=MCH1 PE=3 SV=1	281	471	1.0E-10
sp\|Q07376\|MCH1_YEAST	Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MCH1 PE=1 SV=1	19	471	4.0E-06
sp\|F4I9E1\|NFD4_ARATH	Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana GN=NFD4 PE=3 SV=1	14	439	5.0E-06
sp\|Q5AXV1\|MCH1_EMENI	Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3 SV=2	316	467	5.0E-06

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GO

GO Term	Description	Terminal node
GO:0055085	transmembrane transport	Yes
GO:0022857	transmembrane transporter activity	Yes
GO:0051179	localization	No
GO:0003674	molecular_function	No
GO:0051234	establishment of localization	No
GO:0008150	biological_process	No
GO:0009987	cellular process	No
GO:0005215	transporter activity	No
GO:0006810	transport	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 29	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	15	37	22
2	83	105	22
3	115	137	22
4	158	180	22
5	184	206	22
6	307	329	22
7	351	373	22
8	386	408	22
9	418	440	22
10	447	466	19

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|077730 MASAKPPGIVSAPRITTLIASLLVSTSSGTNYAFSAWAPQLGSRLRINHTRLNVIGLAGNVGVYSSGPIWGRIVD KRGPRIPLIGAFVLLFLGYSGVKSFFDAGLPGDAQTAGLSTFSFILLVFCNYMTGSGGNGGLTSSVNSTAKTFPD RARATATGFVLGGFGLSAFVFSTLAHVIFAGNTSAFLQILALGTSLPMIIGCFLVRPIPLPLDVSAGPERGIGAL PGAVTSTSALIDDDSRGPLLARESDWELNGPEEPSYNHVRALSRSSSDAISADELPNRRSHGRTDDDLPNITGMQ LWKSGDFYLLFTILSILAGTGLMYINNVGTMSQTLYAQNNSQYDEVEAGKWQAMQVSVISIMNFSGRILIGIISD AAKNRFKIPRSYCLVLVSIGVFLSQVAAARITMTSDLWLASAMLGISYGAVFSIMPQICIEWFGLQHFSENWGYL SMSPMVAGNLFMLFFGRNLDAHEPRTSLQSPYTARRENLLTPDDIPRCLEGKDCYVAALLEGTPTVDGFG*
Coding	>AgabiH97\|077730 ATGGCGTCTGCTAAGCCTCCTGGGATTGTGAGTGCTCCCAGAATCACCACACTCATCGCTTCGCTGCTGGTATCT ACCAGCTCTGGAACTAACTATGCCTTTTCTGCTTGGGCACCTCAGCTTGGGTCTCGATTGCGCATTAATCATACA AGGCTGAATGTTATCGGATTAGCTGGAAACGTTGGCGTGTACAGTTCTGGACCAATATGGGGGCGCATTGTGGAT AAGAGGGGACCTCGTATTCCACTGATTGGAGCATTTGTATTGCTCTTTCTTGGATATTCTGGCGTGAAGAGTTTC TTCGATGCGGGGCTTCCTGGTGACGCTCAGACGGCGGGGCTATCGACTTTCAGTTTCATTCTGTTGGTTTTTTGC AATTACATGACCGGTTCAGGCGGGAATGGAGGCTTGACGAGTTCCGTAAATTCGACGGCGAAGACGTTCCCAGAC AGGGCACGCGCTACGGCAACGGGCTTCGTTCTCGGTGGATTCGGATTGTCTGCATTCGTTTTTTCGACCCTGGCC CATGTCATATTCGCTGGGAATACATCAGCTTTCCTGCAAATTCTGGCGCTGGGAACGTCATTACCTATGATCATC GGGTGTTTCCTTGTCAGACCCATCCCACTGCCATTGGATGTATCGGCTGGTCCTGAGCGAGGGATTGGTGCTTTG CCCGGAGCCGTGACCAGCACTTCAGCGTTGATTGATGATGACTCTCGTGGACCATTATTAGCTCGCGAGTCGGAC TGGGAGTTGAATGGGCCGGAAGAGCCATCTTACAATCATGTTCGCGCGTTGTCTAGATCATCCTCCGACGCAATC TCGGCAGACGAGCTTCCTAATCGTCGCTCCCACGGACGAACCGACGACGATTTACCCAATATTACTGGAATGCAA TTATGGAAGAGTGGAGATTTTTATCTGCTTTTCACGATACTCTCTATACTCGCTGGAACGGGCTTGATGTACATC AATAATGTTGGAACCATGTCTCAAACACTTTATGCGCAAAACAATTCCCAGTACGATGAGGTTGAAGCTGGGAAG TGGCAAGCTATGCAGGTATCGGTCATCAGTATTATGAACTTTTCGGGTCGCATTCTCATTGGTATTATTTCCGAC GCCGCAAAAAATAGATTCAAGATTCCACGCTCCTACTGCCTCGTGTTGGTCTCTATTGGTGTATTCCTTTCTCAA GTCGCCGCAGCACGAATTACTATGACAAGCGATCTATGGTTAGCAAGTGCAATGCTTGGCATCTCCTATGGCGCT GTATTCTCCATTATGCCTCAAATATGTATTGAGTGGTTCGGTCTACAGCATTTCTCAGAAAACTGGGGATACCTA TCCATGTCGCCAATGGTCGCCGGCAATTTATTCATGTTGTTTTTCGGCCGCAATTTAGATGCACACGAGCCGAGA ACTTCACTGCAATCACCTTATACCGCCAGACGGGAAAATTTGTTGACCCCTGACGATATACCGCGGTGTCTGGAA GGAAAAGACTGTTACGTTGCGGCCCTGCTGGAGGGAACACCAACGGTCGATGGATTTGGTTAG
Transcript	>AgabiH97\|077730 ATGGCGTCTGCTAAGCCTCCTGGGATTGTGAGTGCTCCCAGAATCACCACACTCATCGCTTCGCTGCTGGTATCT ACCAGCTCTGGAACTAACTATGCCTTTTCTGCTTGGGCACCTCAGCTTGGGTCTCGATTGCGCATTAATCATACA AGGCTGAATGTTATCGGATTAGCTGGAAACGTTGGCGTGTACAGTTCTGGACCAATATGGGGGCGCATTGTGGAT AAGAGGGGACCTCGTATTCCACTGATTGGAGCATTTGTATTGCTCTTTCTTGGATATTCTGGCGTGAAGAGTTTC TTCGATGCGGGGCTTCCTGGTGACGCTCAGACGGCGGGGCTATCGACTTTCAGTTTCATTCTGTTGGTTTTTTGC AATTACATGACCGGTTCAGGCGGGAATGGAGGCTTGACGAGTTCCGTAAATTCGACGGCGAAGACGTTCCCAGAC AGGGCACGCGCTACGGCAACGGGCTTCGTTCTCGGTGGATTCGGATTGTCTGCATTCGTTTTTTCGACCCTGGCC CATGTCATATTCGCTGGGAATACATCAGCTTTCCTGCAAATTCTGGCGCTGGGAACGTCATTACCTATGATCATC GGGTGTTTCCTTGTCAGACCCATCCCACTGCCATTGGATGTATCGGCTGGTCCTGAGCGAGGGATTGGTGCTTTG CCCGGAGCCGTGACCAGCACTTCAGCGTTGATTGATGATGACTCTCGTGGACCATTATTAGCTCGCGAGTCGGAC TGGGAGTTGAATGGGCCGGAAGAGCCATCTTACAATCATGTTCGCGCGTTGTCTAGATCATCCTCCGACGCAATC TCGGCAGACGAGCTTCCTAATCGTCGCTCCCACGGACGAACCGACGACGATTTACCCAATATTACTGGAATGCAA TTATGGAAGAGTGGAGATTTTTATCTGCTTTTCACGATACTCTCTATACTCGCTGGAACGGGCTTGATGTACATC AATAATGTTGGAACCATGTCTCAAACACTTTATGCGCAAAACAATTCCCAGTACGATGAGGTTGAAGCTGGGAAG TGGCAAGCTATGCAGGTATCGGTCATCAGTATTATGAACTTTTCGGGTCGCATTCTCATTGGTATTATTTCCGAC GCCGCAAAAAATAGATTCAAGATTCCACGCTCCTACTGCCTCGTGTTGGTCTCTATTGGTGTATTCCTTTCTCAA GTCGCCGCAGCACGAATTACTATGACAAGCGATCTATGGTTAGCAAGTGCAATGCTTGGCATCTCCTATGGCGCT GTATTCTCCATTATGCCTCAAATATGTATTGAGTGGTTCGGTCTACAGCATTTCTCAGAAAACTGGGGATACCTA TCCATGTCGCCAATGGTCGCCGGCAATTTATTCATGTTGTTTTTCGGCCGCAATTTAGATGCACACGAGCCGAGA ACTTCACTGCAATCACCTTATACCGCCAGACGGGAAAATTTGTTGACCCCTGACGATATACCGCGGTGTCTGGAA GGAAAAGACTGTTACGTTGCGGCCCTGCTGGAGGGAACACCAACGGTCGATGGATTTGGTTAG
Gene	>AgabiH97\|077730 ATGGCGTCTGCTAAGCCTCCTGGGATTGTGAGTGCTCCCAGAATCACCACACTCATCGCTTCGCTGCTGGTATCT ACCAGCTCTGGAACTAACTATGTGAGTAAGAGCCGCATAGTTCTTCTTGAGGTAACTTACGCGGAAGAAACTTTC TTTCGTTCTAGGCCTTTTCTGGTGGGTGTCTTACAACCTTGGTTGATTCCTAAAAGCATATTGGGGGGGTGCGGG ATTCCCCGCGTATCGGAATGCAACGAAAGAATAATGCTGACTGTGTTGGAAACGAAACACAGCTTGGGCACCTCA GCTTGGGTCTCGATTGCGCATTAATCATACAAGGCTGAATGTTATCGGATTAGCTGGAAACGGTGTGTGTCATTT CGCTAGGGTCGTGTCAATGTTGGAAATTTATAATTGTGTCTGTTCACTTTTTTTAGTTGGCGTGTACAGTTCTGG ACCAATATGGGGGCGCATTGTGGATAAGAGGGGACCTCGTATTCCACTGATTGGAGCATTTGTATTGCTCTTTCT TGGATATTCTGGCGTGAAGAGTTTCTTCGATGCGGGGCTTCCTGGTGACGCTCAGACGGCGGGGCTATCGACTTT CAGTTTCATTCTGTTGGTTTTTTGCAATTACATGACCGGTTCAGGCGGGAATGGAGGCTTGACGAGTTCCGTAAA TTCGACGGCGAAGACGTTCCCAGACAGGGCAGTGCGTGATTTTCCCCTTTTTTCGTGGAGAATACTGATTATGAC TTTCAATAACCTTTGCGGTTGCAGCGCGCTACGGCAACGGGCTTCGTTCTCGGTGGATTCGGATTGTCTGCATTC GTTTTTTCGACCCTGGCCCATGTCATATTCGCTGGGAATACATCAGCTTTCCTGCAAATTCTGGCGCTGGGAACG TCATTACCTATGATCATCGGGTGTTTCCTTGTCAGACCCATCCCACTGCCATTGGATGTATCGGCTGGTCCTGAG CGAGGGATTGGTGCTTTGCCCGGAGCCGTGACCAGCACTTCAGCGTTGATTGATGATGACTCTCGTGGACCATTA TTAGCTCGCGAGTCGGACTGGGAGTTGAATGGGCCGGAAGAGCCATCTTACAATCATGTTCGCGCGTTGTCTAGA TCATCCTCCGACGCAATCTCGGCAGACGAGCTTCCTAATCGTCGCTCCCACGGACGAACCGACGACGATTTACCC AATATTACTGGAATGCAATTATGGAAGAGTGGAGATTTTTATCTGCTTTTCACGATACTCTCTATACGTATGTGC TTCTGCGCCTTCTTAATCTTGTTTCGTAATATGCTTACTGTCCCCTGTTTCGTGTACGCCCCATTCAAATCAGTC GCTGGAACGGGCTTGATGTGTGAGTCTCGCTTGACACTCTTTTTTGGAAATGTTTGCCAATATACATCTTTCCTT TCAAACGTACAGACATCAATAATGTTGGAACCATGTCTCAAACACTTTATGCGCAAAACAATTCCCAGTACGATG AGGTTGAAGCTGGGAAGTGGCAAGCTATGCAGGTATCGGTCATCAGTATTATGAACTTTTCGGGTCGCATTCTCA TTGGTGAGTCGCCTGAAATTATTTTCTTGTGCTACAATCTCTTATCTAGCTCTCCTGTGTGGGTTTTGGTTTCCG CCGCTCTCCGTCGCCATTGATCCAGGTATTATTTCCGACGCCGCAAAAAATAGATTCAAGATTCCACGCTCCTAC TGCCTCGTGTTGGTCTCTATTGGTGTATTCCTTTCTCAAGTCGCCGCAGCACGAATTACTATGACAAGCGATCTA TGGTTAGCAAGTGCAATGCTTGGCATCTCCTATGGCGCTGTATTCTCCATTATGCCTCAAATATGTATTGAGTGG TTCGGTCTACGTGAGTGTTTTGGCATCATATAAGGGGCCTTGTGCATTCTTCGTACTCCATGGTTCACGAGTCCC ATCATCCATTTTCATGACGTTTTTTTCGATTATTAATAAATCGCTTCCCGTACTAATTTCATATCCACAGAGCAT TTCTCAGAAAACTGGGGATACCTATCCATGTCGCCAATGGTCGCCGGCAATTTATTCATGTTGTTTTTCGGCCGC AATTTAGATGCACACGAGCCGAGAACTTCACTGCAATCACCTTATACCGCCAGACGGGAAAATTTGTTGACCCCT GACGATATACCGCGGTGTCTGGAAGGAAAAGACTGTTACGTTGCGGCCCTGTATCTGACGATGTTCATGACGTTC ACTTGTATCTTGCTGAGCGTATGGGCAGGCTGGAGGGAACACCAACGGTCGATGGATTTGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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