© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|077710 |
| Gene name | |
| Location | scaffold_4:2972388..2974363 |
| Strand | + |
| Gene length (bp) | 1975 |
| Transcript length (bp) | 1656 |
| Coding sequence length (bp) | 1656 |
| Protein length (aa) | 552 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.2E-30 | 75 | 500 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 6.1E-08 | 82 | 219 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 49 | 534 | 6.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 28 | 515 | 7.0E-36 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 53 | 514 | 2.0E-30 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 53 | 513 | 9.0E-30 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 74 | 281 | 8.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q94BZ1|ZIFL1_ARATH | Protein ZINC INDUCED FACILITATOR-LIKE 1 OS=Arabidopsis thaliana GN=ZIFL1 PE=2 SV=1 | 49 | 534 | 6.0E-37 |
| sp|Q8RWN2|ZIF1_ARATH | Protein ZINC INDUCED FACILITATOR 1 OS=Arabidopsis thaliana GN=ZIF1 PE=1 SV=2 | 28 | 515 | 7.0E-36 |
| sp|Q3EAQ5|PTR36_ARATH | Probable peptide/nitrate transporter At3g43790 OS=Arabidopsis thaliana GN=ZIFL2 PE=2 SV=2 | 53 | 514 | 2.0E-30 |
| sp|P25351|YCR3_YEAST | Uncharacterized membrane protein YCR023C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR023C PE=1 SV=2 | 53 | 513 | 9.0E-30 |
| sp|B4EYY4|MDTG_PROMH | Multidrug resistance protein MdtG OS=Proteus mirabilis (strain HI4320) GN=mdtG PE=3 SV=1 | 74 | 281 | 8.0E-10 |
| sp|D8MQN9|MDTG_ERWBE | Multidrug resistance protein MdtG OS=Erwinia billingiae (strain Eb661) GN=mdtG PE=3 SV=1 | 74 | 264 | 8.0E-09 |
| sp|A8GCZ5|MDTG_SERP5 | Multidrug resistance protein MdtG OS=Serratia proteamaculans (strain 568) GN=mdtG PE=3 SV=1 | 74 | 264 | 1.0E-07 |
| sp|P0A4K5|PMRA_STRR6 | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1 | 74 | 266 | 5.0E-07 |
| sp|P0A4K4|PMRA_STRPN | Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3 SV=1 | 74 | 266 | 5.0E-07 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 79 | 216 | 8.0E-07 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 99 | 216 | 2.0E-06 |
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 79 | 216 | 5.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 98 | 120 | 22 |
| 3 | 130 | 152 | 22 |
| 4 | 188 | 210 | 22 |
| 5 | 230 | 252 | 22 |
| 6 | 347 | 369 | 22 |
| 7 | 384 | 406 | 22 |
| 8 | 418 | 436 | 18 |
| 9 | 451 | 473 | 22 |
| 10 | 480 | 499 | 19 |
| 11 | 519 | 541 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|077710 MRASMDNSSGEVDEPWTRQTSGTGGGPYKSTSPALRTQAHSELHPKGVMRTPLPKFQLFLVMLIQVAEPITGLVI YPFINQFIRDTGVTKGDDRKVGYYAGIIESAFFFTEALTVFQWGWLSDRIGRKPVLLLGPLGLMCAMFKFGYSTS FWPLVWSRCLQGAFNGNIGVSKTVVIELTDETNIGDAVAMIPLMWSFGSTIAPFMGGILSNPAKRWPESFGKFSF FTDHPYFLPCFAAGCIALLAFVVTLLGLKETHPTVLARESSRNPKTKQFVYDSEGNVNGSTETLLGQNNPVVYGS TDSTRCPSIVSDYAIIGELDAIPQEPPDPNTPTLLSALKSRTLQLTIVNFAFLAFSEMCFSALMPLMYSTSIEYG GLGLNPYEIGVIMGIWGFLNVFVQMTVLGSVIRRFGASRVYQFSYSAFFIVFLTFPFSAYMARRQGGMGAGVYAS IFIQLTFQFFIPMGFGSIHVVIAETTPKPVLGSINGIAQMVGSMMRTIAPTFASSLFSMSLEERLPLGRNFVYGV ILVLVAGGIACSLTLPERKNRLSSAS* |
| Coding | >AgabiH97|077710 ATGCGAGCGTCCATGGATAACTCGTCGGGCGAGGTTGATGAGCCTTGGACTCGCCAAACGAGCGGTACCGGTGGT GGGCCTTATAAGTCAACATCACCCGCTCTTCGTACTCAAGCGCACAGCGAGCTCCACCCAAAAGGTGTCATGCGG ACTCCTTTGCCAAAATTTCAACTATTCCTCGTCATGCTCATCCAGGTCGCCGAACCTATTACGGGACTAGTAATA TACCCCTTCATCAACCAATTTATCAGAGATACCGGAGTGACGAAAGGAGATGATAGGAAGGTGGGGTATTACGCT GGTATCATTGAATCGGCTTTCTTCTTTACAGAGGCACTCACGGTGTTCCAGTGGGGATGGTTATCCGACCGTATT GGAAGAAAACCCGTGTTATTACTTGGTCCACTGGGTCTCATGTGTGCGATGTTTAAGTTCGGGTACTCAACTTCG TTCTGGCCATTAGTCTGGTCTCGATGTCTTCAGGGCGCATTTAATGGTAATATTGGCGTTTCAAAGACTGTTGTT ATTGAACTGACCGATGAGACGAACATTGGGGATGCCGTTGCTATGATACCTCTCATGTGGAGTTTCGGCTCGACC ATCGCCCCGTTCATGGGTGGAATCTTGTCCAATCCCGCAAAACGATGGCCCGAAAGTTTTGGAAAATTTTCGTTC TTCACGGACCATCCCTATTTTCTACCTTGCTTTGCTGCTGGTTGCATTGCTTTGCTCGCTTTCGTCGTCACTTTG TTGGGACTTAAAGAGACACATCCCACTGTTTTGGCTCGTGAAAGCAGCAGAAATCCGAAGACCAAGCAGTTCGTT TACGACTCCGAGGGAAACGTCAACGGTTCTACGGAAACACTTTTAGGACAAAACAATCCTGTGGTTTATGGATCA ACCGATTCCACGCGCTGCCCTTCAATCGTGTCCGATTATGCCATCATAGGCGAACTCGACGCGATTCCTCAAGAA CCGCCAGATCCAAATACTCCAACCCTACTTTCTGCGTTAAAATCTAGGACTCTACAGTTAACGATCGTCAATTTT GCTTTCCTCGCGTTCTCGGAAATGTGCTTTTCGGCCCTGATGCCTCTGATGTATTCTACTTCGATTGAATACGGT GGACTGGGACTGAATCCGTATGAAATAGGAGTTATTATGGGCATTTGGGGTTTTCTAAATGTCTTTGTACAGATG ACTGTGCTTGGGAGCGTCATCAGGAGATTTGGGGCTAGTCGGGTTTATCAGTTCTCGTATTCGGCTTTTTTCATC GTCTTCTTGACGTTTCCTTTTTCTGCATATATGGCTCGGAGACAGGGAGGGATGGGAGCTGGCGTCTATGCCTCG ATATTCATCCAGCTTACGTTCCAGTTCTTTATTCCCATGGGCTTTGGATCGATACACGTCGTCATTGCCGAAACG ACACCGAAACCTGTTTTGGGATCTATCAATGGTATTGCGCAGATGGTTGGATCCATGATGCGAACTATTGCTCCG ACATTTGCTTCTTCGTTGTTTTCTATGTCTTTGGAAGAACGACTTCCTCTAGGGAGGAATTTTGTGTATGGTGTT ATACTTGTGTTGGTTGCGGGTGGGATAGCGTGCAGTTTGACATTACCGGAACGAAAGAATAGGTTGTCGTCTGCT TCATAG |
| Transcript | >AgabiH97|077710 ATGCGAGCGTCCATGGATAACTCGTCGGGCGAGGTTGATGAGCCTTGGACTCGCCAAACGAGCGGTACCGGTGGT GGGCCTTATAAGTCAACATCACCCGCTCTTCGTACTCAAGCGCACAGCGAGCTCCACCCAAAAGGTGTCATGCGG ACTCCTTTGCCAAAATTTCAACTATTCCTCGTCATGCTCATCCAGGTCGCCGAACCTATTACGGGACTAGTAATA TACCCCTTCATCAACCAATTTATCAGAGATACCGGAGTGACGAAAGGAGATGATAGGAAGGTGGGGTATTACGCT GGTATCATTGAATCGGCTTTCTTCTTTACAGAGGCACTCACGGTGTTCCAGTGGGGATGGTTATCCGACCGTATT GGAAGAAAACCCGTGTTATTACTTGGTCCACTGGGTCTCATGTGTGCGATGTTTAAGTTCGGGTACTCAACTTCG TTCTGGCCATTAGTCTGGTCTCGATGTCTTCAGGGCGCATTTAATGGTAATATTGGCGTTTCAAAGACTGTTGTT ATTGAACTGACCGATGAGACGAACATTGGGGATGCCGTTGCTATGATACCTCTCATGTGGAGTTTCGGCTCGACC ATCGCCCCGTTCATGGGTGGAATCTTGTCCAATCCCGCAAAACGATGGCCCGAAAGTTTTGGAAAATTTTCGTTC TTCACGGACCATCCCTATTTTCTACCTTGCTTTGCTGCTGGTTGCATTGCTTTGCTCGCTTTCGTCGTCACTTTG TTGGGACTTAAAGAGACACATCCCACTGTTTTGGCTCGTGAAAGCAGCAGAAATCCGAAGACCAAGCAGTTCGTT TACGACTCCGAGGGAAACGTCAACGGTTCTACGGAAACACTTTTAGGACAAAACAATCCTGTGGTTTATGGATCA ACCGATTCCACGCGCTGCCCTTCAATCGTGTCCGATTATGCCATCATAGGCGAACTCGACGCGATTCCTCAAGAA CCGCCAGATCCAAATACTCCAACCCTACTTTCTGCGTTAAAATCTAGGACTCTACAGTTAACGATCGTCAATTTT GCTTTCCTCGCGTTCTCGGAAATGTGCTTTTCGGCCCTGATGCCTCTGATGTATTCTACTTCGATTGAATACGGT GGACTGGGACTGAATCCGTATGAAATAGGAGTTATTATGGGCATTTGGGGTTTTCTAAATGTCTTTGTACAGATG ACTGTGCTTGGGAGCGTCATCAGGAGATTTGGGGCTAGTCGGGTTTATCAGTTCTCGTATTCGGCTTTTTTCATC GTCTTCTTGACGTTTCCTTTTTCTGCATATATGGCTCGGAGACAGGGAGGGATGGGAGCTGGCGTCTATGCCTCG ATATTCATCCAGCTTACGTTCCAGTTCTTTATTCCCATGGGCTTTGGATCGATACACGTCGTCATTGCCGAAACG ACACCGAAACCTGTTTTGGGATCTATCAATGGTATTGCGCAGATGGTTGGATCCATGATGCGAACTATTGCTCCG ACATTTGCTTCTTCGTTGTTTTCTATGTCTTTGGAAGAACGACTTCCTCTAGGGAGGAATTTTGTGTATGGTGTT ATACTTGTGTTGGTTGCGGGTGGGATAGCGTGCAGTTTGACATTACCGGAACGAAAGAATAGGTTGTCGTCTGCT TCATAG |
| Gene | >AgabiH97|077710 ATGCGAGCGTCCATGGATAACTCGTCGGGCGAGGTTGATGAGCCTTGGACTCGCCAAACGAGCGGTACCGGTGGT GGGCCTTATAAGTCAACATCACCCGCTCTTCGTACTCAAGCGCACAGCGAGCTCCACCCAAAAGGTGTCATGCGG ACTCCTTTGCCAAAATTTCAACTATTCCTCGTCATGCTCATCCAGGTCGCCGAACCTATTACGGGACTAGTAATA TACCCCTTCATCAACCAATTTATCAGAGATACCGGAGTGACGAAAGGAGATGATAGGAAGGTGGGGTATTACGCT GGTATCATTGTGAGTCGGGCGCTTGTTTCCTTAGTTTGTCTAATGATTTCTTGTAGGAATCGGCTTTCTTCTTTA CAGAGGCACTCACGGTGTTCCAGTGGGGATGGTTATCCGACCGTATTGGAAGAAAACCCGTGTTATTACTTGGTC CACTGGGTCTCATGTGTGCGATGTTTAAGTTCGGGTACTCAACTTCGTTCTGGCCATTAGTCTGGTCTCGATGTC TTCAGGGCGCATTTAATGGTAATATTGGTGAGAATTCAGCTTCAAGTTCTAAATCGATCCATACTCAGTTTTCAA GTAGGCGTTTCAAAGACTGTTGTTATTGAAGTACGTTGCTACGCAGTATCAAAACCAGAATTTTTCTAACGAATT TTTTAGCTGACCGATGAGACGAACATTGGGGATGCCGTTGCTATGATACCTCTCATGTGGAGTTTCGGCTCGACC ATCGCGTATGCCTTTCAAATCCCTCCTATGTTGACTCATGCTCATGAATAGTTGGCAGCCCGTTCATGGGTGGAA TCTTGTCCAATCCCGCAAAACGATGGCCCGAAAGTTTTGGAAAATTTTCGTTCTTCACGGACCATCCCTATTTTC TACCTTGCTTTGCTGCTGGTTGCATTGCTTTGCTCGCTTTCGTCGTCACTTTGTTGGGACTTAAAGAGGTATATT TTCAGGACGCTGCTCAGTCTATGCTTCCGGTTGACTCACATGCCTCATAGACACATCCCACTGTTTTGGCTCGTG AAAGCAGCAGAAATCCGAAGACCAAGCAGTTCGTTTACGACTCCGAGGGAAACGTCAACGGTTCTACGGAAACAC TTTTAGGACAAAACAATCCTGTGGTTTATGGATCAACCGATTCCACGCGCTGCCCTTCAATCGTGTCCGATTATG CCATCATAGGCGAACTCGACGCGATTCCTCAAGAACCGCCAGATCCAAATACTCCAACCCTACTTTCTGCGTTAA AATCTAGGACTCTACAGTTAACGATCGTCAATTTTGCTTTCCTCGCGTTCTCGGAAATGTGCTTTTCGGCCCTGA TGCCTCTGATGTATTCTACTTCGATTGAATACGGTGGACTGGGACTGAATCCGTATGAAATAGGAGTTATTATGG GCATTTGGGGTTTTCTAAATGTCTTTGTACAGATGACTGTGCTTGGGAGCGTCATCAGGAGATTTGGGGCTAGTC GGGTTTATCAGTTCTCGTATTCGGCTTTTTTCATCGTCTTCTTGACGTTTCCTTTTTCTGCATATATGGCTCGGA GACAGGGAGGGATGGGAGCTGGCGTCTATGCCTCGATATTCATCCAGCTTACGTTCCAGTTCTTTATTCCCATGG GCTTTGGTACGTTTTCTTTGGATTACTTTTAAAAGTTTGTTATTGATAAAACCGCATACTCAAAGGATCGATACA CGTCGTCATTGCCGAAACGACACCGAAACCTGTTTTGGGATCTATCAATGGTATTGCGCAGATGGTTGGATCCAT GATGCGAACTATTGCTCCGACATTTGCTTCTTCGTTGTTTTCTATGTCTTTGGAAGAACGACTTCCTCTAGGGAG GAATTTTGTGTATGGTGTTATACTTGTGTTGGTTGCGGGTGGGATAGCGTGCAGTTTGACATTACCGGAACGAAA GAATAGGTTGTCGTCTGCTTCATAG |