Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|077170
Gene name
Locationscaffold_4:2801176..2802612
Strand-
Gene length (bp)1436
Transcript length (bp)1323
Coding sequence length (bp)1323
Protein length (aa) 441

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13668 Ferritin_2 Ferritin-like domain 1.6E-36 33 168

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|077170
MHVPSFIAALAATPLFVSAAPARFYGKRAAAASDVTVLQFANVLEQLETEFYTQGIAKFQSSDFTAAGFKNSDVP
LQQLQDILKDEATHTKVLQDTLKSLGQTPITSCKFKFDSALTDVATMAATARVVENVGVAAYAGAARLVEDRELL
TAAATIMTVEARHQTIMNILSRTGTPVPSAFDIALNPNEVLAIAAPFIDGPCDLGVAPNPTLAITNQGAVQPGTL
LTFSSDALNGPTDGKFCQMMIGGSPFSISLPLDQCVVPSGINGPVAIWITSDGQALLNDVVNRAAKGVVAGPTMA
FIDTIPEALSEVAVSGSDGLANNAGSSNPPSNDGSTSTTISTSTISPAEASSIIASAANPTQTGSAGAAAPAVVA
GPVSSVTVSADSAAATDGAAPPSPSGNAASSNPAVNVTPGQPNMFMGKSSDGSLTVLGWSETPAQ*
Coding >AgabiH97|077170
ATGCACGTCCCGTCGTTTATCGCTGCACTCGCTGCTACTCCTCTTTTCGTTTCGGCGGCTCCTGCTCGTTTCTAT
GGAAAGCGCGCGGCTGCGGCTTCAGACGTAACGGTCCTTCAGTTCGCCAATGTCCTGGAACAGCTCGAGACCGAA
TTCTACACACAGGGCATTGCGAAGTTTCAAAGTTCCGATTTCACCGCCGCCGGTTTCAAAAATAGTGACGTCCCT
CTCCAGCAACTCCAGGACATCCTGAAAGATGAAGCTACGCATACCAAGGTGCTGCAGGATACTCTAAAGTCTCTT
GGGCAAACACCCATCACCAGCTGCAAGTTCAAATTTGACTCCGCCCTTACCGATGTCGCTACTATGGCAGCCACT
GCTCGGGTTGTTGAGAACGTTGGTGTTGCGGCGTACGCGGGAGCAGCTCGTCTAGTCGAGGACCGCGAACTACTT
ACTGCTGCTGCTACCATTATGACAGTTGAGGCGCGTCACCAGACTATCATGAATATTCTTTCTCGCACCGGAACA
CCCGTCCCTTCCGCCTTCGACATTGCACTCAATCCCAATGAAGTTCTCGCCATAGCCGCACCATTTATTGACGGC
CCGTGTGATCTTGGTGTCGCCCCCAATCCGACGTTGGCTATCACGAACCAAGGAGCCGTTCAGCCCGGAACTCTC
CTCACCTTTAGTTCAGACGCCTTGAACGGCCCAACGGACGGCAAATTCTGTCAAATGATGATTGGCGGTTCACCC
TTCTCGATTAGTCTTCCCCTAGACCAGTGTGTTGTTCCTAGTGGTATCAACGGCCCAGTCGCAATCTGGATCACA
TCTGATGGTCAAGCCCTCCTCAACGATGTTGTGAATCGCGCAGCGAAAGGTGTCGTTGCTGGACCTACCATGGCT
TTCATTGATACGATTCCTGAAGCTCTCAGTGAAGTTGCCGTCAGTGGTTCTGACGGCCTTGCTAACAATGCTGGC
TCGAGCAACCCTCCCTCAAACGATGGATCTACCAGCACCACAATCAGCACTTCCACTATTTCCCCGGCCGAAGCT
TCATCCATCATTGCCAGTGCGGCGAATCCTACACAAACCGGCAGTGCTGGTGCAGCAGCCCCCGCTGTCGTTGCG
GGTCCCGTATCGTCTGTCACTGTCTCGGCCGATAGTGCGGCTGCGACTGACGGTGCGGCACCTCCGTCACCCTCC
GGTAACGCTGCTTCTTCGAACCCCGCCGTTAATGTGACGCCCGGACAGCCCAACATGTTCATGGGCAAGTCTTCC
GATGGTTCACTTACCGTTCTCGGCTGGTCTGAGACTCCTGCTCAATGA
Transcript >AgabiH97|077170
ATGCACGTCCCGTCGTTTATCGCTGCACTCGCTGCTACTCCTCTTTTCGTTTCGGCGGCTCCTGCTCGTTTCTAT
GGAAAGCGCGCGGCTGCGGCTTCAGACGTAACGGTCCTTCAGTTCGCCAATGTCCTGGAACAGCTCGAGACCGAA
TTCTACACACAGGGCATTGCGAAGTTTCAAAGTTCCGATTTCACCGCCGCCGGTTTCAAAAATAGTGACGTCCCT
CTCCAGCAACTCCAGGACATCCTGAAAGATGAAGCTACGCATACCAAGGTGCTGCAGGATACTCTAAAGTCTCTT
GGGCAAACACCCATCACCAGCTGCAAGTTCAAATTTGACTCCGCCCTTACCGATGTCGCTACTATGGCAGCCACT
GCTCGGGTTGTTGAGAACGTTGGTGTTGCGGCGTACGCGGGAGCAGCTCGTCTAGTCGAGGACCGCGAACTACTT
ACTGCTGCTGCTACCATTATGACAGTTGAGGCGCGTCACCAGACTATCATGAATATTCTTTCTCGCACCGGAACA
CCCGTCCCTTCCGCCTTCGACATTGCACTCAATCCCAATGAAGTTCTCGCCATAGCCGCACCATTTATTGACGGC
CCGTGTGATCTTGGTGTCGCCCCCAATCCGACGTTGGCTATCACGAACCAAGGAGCCGTTCAGCCCGGAACTCTC
CTCACCTTTAGTTCAGACGCCTTGAACGGCCCAACGGACGGCAAATTCTGTCAAATGATGATTGGCGGTTCACCC
TTCTCGATTAGTCTTCCCCTAGACCAGTGTGTTGTTCCTAGTGGTATCAACGGCCCAGTCGCAATCTGGATCACA
TCTGATGGTCAAGCCCTCCTCAACGATGTTGTGAATCGCGCAGCGAAAGGTGTCGTTGCTGGACCTACCATGGCT
TTCATTGATACGATTCCTGAAGCTCTCAGTGAAGTTGCCGTCAGTGGTTCTGACGGCCTTGCTAACAATGCTGGC
TCGAGCAACCCTCCCTCAAACGATGGATCTACCAGCACCACAATCAGCACTTCCACTATTTCCCCGGCCGAAGCT
TCATCCATCATTGCCAGTGCGGCGAATCCTACACAAACCGGCAGTGCTGGTGCAGCAGCCCCCGCTGTCGTTGCG
GGTCCCGTATCGTCTGTCACTGTCTCGGCCGATAGTGCGGCTGCGACTGACGGTGCGGCACCTCCGTCACCCTCC
GGTAACGCTGCTTCTTCGAACCCCGCCGTTAATGTGACGCCCGGACAGCCCAACATGTTCATGGGCAAGTCTTCC
GATGGTTCACTTACCGTTCTCGGCTGGTCTGAGACTCCTGCTCAATGA
Gene >AgabiH97|077170
ATGCACGTCCCGTCGTTTATCGCTGCACTCGCTGCTACTCCTCTTTTCGTTTCGGCGGCTCCTGCTCGTTTCTAT
GGAAAGCGCGCGGCTGCGGCTTCAGACGTAACGGTCCTTCGTATGTGTTGCGTTCAATCCATTTTCAACAGTCAT
ATAAATGTTTTTTGTGTTCCTACTAGAGTTCGCCAATGTCCTGGAACAGCTCGAGACCGAATTCTACACACAGGG
CATTGCGAAGTTTCAAAGTTCCGATTTCACCGCCGCCGGTTTCAAAAATAGTGACGTCCCTCTCCAGCAACTCCA
GGACATCCTGAAAGATGAAGCTACGCATACCAAGGTGCTGCAGGATACTCTAAAGTCTCTTGGGCAAACACCCAT
CACCAGCTGCAAGTTCAAATTTGACTCCGCCCTTACCGATGTCGCTACTATGGCAGCCACTGCTCGGGTTGTTGA
GAACGTTGGTGTTGCGGCGTACGCGGGAGCAGCTCGTCTAGTCGAGGACCGCGAACTACTTACTGCTGCTGCTAC
CATTATGACAGTTGAGGCGCGTCACCAGACTATCATGAATATTCTTTCTCGCACCGGAACACCCGTCCCTTCCGC
CTTCGACATTGCACTCAATCCCAATGAAGTTCTCGCCATAGCCGCACCATTTATTGACGGCCCGTGTGATCTTGG
TGTCGCCCCCAATCCGACGTTGGCTATCACGAACCAAGGAGCCGTTCAGCCCGGAACTCTCCTCACCTTTAGTTC
AGACGCCTTGAACGGCCCAACGGACGTGAGGAAGTTTAACGTCGTTATGCCAACAGCTACTAACTCTATTCTAAT
AGGGCAAATTCTGTCAAATGATGATTGGCGGTTCACCCTTCTCGATTAGTCTTCCCCTAGACCAGTGTGTTGTTC
CTAGTGGTATCAACGGCCCAGTCGCAATCTGGATCACATCTGATGGTCAAGCCCTCCTCAACGATGTTGTGAATC
GCGCAGCGAAAGGTGTCGTTGCTGGACCTACCATGGCTTTCATTGATACGATTCCTGAAGCTCTCAGTGAAGTTG
CCGTCAGTGGTTCTGACGGCCTTGCTAACAATGCTGGCTCGAGCAACCCTCCCTCAAACGATGGATCTACCAGCA
CCACAATCAGCACTTCCACTATTTCCCCGGCCGAAGCTTCATCCATCATTGCCAGTGCGGCGAATCCTACACAAA
CCGGCAGTGCTGGTGCAGCAGCCCCCGCTGTCGTTGCGGGTCCCGTATCGTCTGTCACTGTCTCGGCCGATAGTG
CGGCTGCGACTGACGGTGCGGCACCTCCGTCACCCTCCGGTAACGCTGCTTCTTCGAACCCCGCCGTTAATGTGA
CGCCCGGACAGCCCAACATGTTCATGGGCAAGTCTTCCGATGGTTCACTTACCGTTCTCGGCTGGTCTGAGACTC
CTGCTCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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