© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|076950 |
| Gene name | |
| Location | scaffold_4:2754421..2755618 |
| Strand | - |
| Gene length (bp) | 1197 |
| Transcript length (bp) | 990 |
| Coding sequence length (bp) | 990 |
| Protein length (aa) | 330 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 6.0E-13 | 51 | 316 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 1.7E-11 | 87 | 306 |
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 1.6E-10 | 85 | 161 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B7KWT4|RUTD_METC4 | Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 | 36 | 316 | 2.0E-12 |
| sp|D5VGV3|RUTD_CAUST | Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 | 30 | 316 | 2.0E-11 |
| sp|C7CM33|RUTD_METED | Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 | 36 | 316 | 2.0E-11 |
| sp|A8IAD8|RUTD_AZOC5 | Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 | 31 | 158 | 5.0E-11 |
| sp|P00632|ELH2_ACIAD | 3-oxoadipate enol-lactonase 2 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catD PE=1 SV=3 | 36 | 161 | 6.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B7KWT4|RUTD_METC4 | Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 | 36 | 316 | 2.0E-12 |
| sp|D5VGV3|RUTD_CAUST | Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 | 30 | 316 | 2.0E-11 |
| sp|C7CM33|RUTD_METED | Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 | 36 | 316 | 2.0E-11 |
| sp|A8IAD8|RUTD_AZOC5 | Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 | 31 | 158 | 5.0E-11 |
| sp|P00632|ELH2_ACIAD | 3-oxoadipate enol-lactonase 2 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catD PE=1 SV=3 | 36 | 161 | 6.0E-11 |
| sp|B1ZB18|RUTD_METPB | Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 | 41 | 316 | 2.0E-10 |
| sp|A9W3H8|RUTD_METEP | Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain PA1) GN=rutD PE=3 SV=1 | 36 | 316 | 1.0E-07 |
| sp|P26495|PHAB_PSEOL | Poly(3-hydroxyalkanoate) depolymerase OS=Pseudomonas oleovorans GN=phaB PE=3 SV=1 | 88 | 165 | 3.0E-07 |
| sp|Q54528|RDMC_STREF | Aclacinomycin methylesterase RdmC OS=Streptomyces purpurascens GN=rdmC PE=1 SV=1 | 35 | 158 | 4.0E-07 |
| sp|P77044|MHPC_ECOLI | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12) GN=mhpC PE=1 SV=4 | 25 | 318 | 6.0E-07 |
| sp|B1XBJ6|MHPC_ECODH | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12 / DH10B) GN=mhpC PE=3 SV=2 | 25 | 318 | 6.0E-07 |
| sp|A4VQH7|RUTD_PSEU5 | Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 | 36 | 318 | 6.0E-07 |
| sp|Q9KWQ6|HSAD_RHOJR | 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Rhodococcus jostii (strain RHA1) GN=hsaD PE=1 SV=1 | 35 | 327 | 7.0E-07 |
| sp|B6HZX5|MHPC_ECOSE | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain SE11) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|B7N8Q6|MHPC_ECOLU | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|A7ZWZ6|MHPC_ECOHS | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O9:H4 (strain HS) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|B7M2Z7|MHPC_ECO8A | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O8 (strain IAI1) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|B7NK06|MHPC_ECO7I | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|B7L505|MHPC_ECO55 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|A7ZI96|MHPC_ECO24 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mhpC PE=3 SV=2 | 25 | 318 | 1.0E-06 |
| sp|Q8X5K0|MHPC_ECO57 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O157:H7 GN=mhpC PE=3 SV=3 | 25 | 318 | 1.0E-06 |
| sp|B7MPB6|MHPC_ECO81 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O81 (strain ED1a) GN=mhpC PE=3 SV=2 | 25 | 318 | 5.0E-06 |
| sp|B9JLT6|RUTD_AGRRK | Putative aminoacrylate hydrolase RutD OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rutD PE=3 SV=1 | 36 | 324 | 6.0E-06 |
| sp|Q47HL4|MHPC1_DECAR | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1 OS=Dechloromonas aromatica (strain RCB) GN=mhpC1 PE=3 SV=1 | 118 | 318 | 1.0E-05 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|076950 MEFASLDLPTLFNPSTCVRKGLCPVTVPVSGTKHELYFEQHGRGEKYKIILIMGLNSSSFGWVKQVEWFGSEKAF QDEEGEGGEKSTVLIFDNRGVGNSGYPSGPYSTSRMAEDVICLLDHVGWTEEKGVHVVGISLGGMIAQELAWRIP ERIGSLVLAVTTPGGWFWNNIPPWKGAMSLTKLMMTPDPLMMAPIVADMLYTQDWLKERDIDEPNKTNRQVQQEA FLRRVAITKKQRLKGHVSQMVAGLTHHVSAERLRQIGEGVGRVAIVVGDEDHLVWREGSRRLKEGMGKVVLEEWR NTGHGIHVQRWREFNQLVERTIRTGARGV* |
| Coding | >AgabiH97|076950 ATGGAATTCGCATCTCTAGACCTACCCACGCTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA ACCGTACCTGTGAGTGGTACGAAACATGAGTTGTATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGAAAAGGCATTT CAAGATGAAGAAGGGGAGGGGGGAGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGG TATCCAAGTGGACCTTATTCGACGTCGAGGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACT GAGGAAAAAGGGGTGCATGTGGTTGGAATCAGTTTGGGAGGGATGATTGCTCAGGAATTGGCATGGAGGATACCC GAAAGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGATGGTTTTGGAACAACATACCCCCGTGGAAA GGCGCAATGAGTTTAACAAAGTTAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGATATGCTG TACACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAGGAGGCG TTTTTACGCCGGGTGGCGATAACGAAGAAGCAGCGATTAAAAGGGCATGTATCGCAGATGGTGGCGGGGTTGACG CACCATGTGTCGGCTGAGCGGCTGAGGCAGATTGGGGAAGGGGTGGGGCGGGTAGCGATTGTGGTGGGGGACGAG GACCATCTGGTATGGCGGGAGGGGTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGG AATACCGGGCACGGGATCCACGTGCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGT GCACGTGGTGTGTAG |
| Transcript | >AgabiH97|076950 ATGGAATTCGCATCTCTAGACCTACCCACGCTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA ACCGTACCTGTGAGTGGTACGAAACATGAGTTGTATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGAAAAGGCATTT CAAGATGAAGAAGGGGAGGGGGGAGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGG TATCCAAGTGGACCTTATTCGACGTCGAGGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACT GAGGAAAAAGGGGTGCATGTGGTTGGAATCAGTTTGGGAGGGATGATTGCTCAGGAATTGGCATGGAGGATACCC GAAAGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGATGGTTTTGGAACAACATACCCCCGTGGAAA GGCGCAATGAGTTTAACAAAGTTAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGATATGCTG TACACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAGGAGGCG TTTTTACGCCGGGTGGCGATAACGAAGAAGCAGCGATTAAAAGGGCATGTATCGCAGATGGTGGCGGGGTTGACG CACCATGTGTCGGCTGAGCGGCTGAGGCAGATTGGGGAAGGGGTGGGGCGGGTAGCGATTGTGGTGGGGGACGAG GACCATCTGGTATGGCGGGAGGGGTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGG AATACCGGGCACGGGATCCACGTGCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGT GCACGTGGTGTGTAG |
| Gene | >AgabiH97|076950 ATGGAATTCGCATCTCTAGACCTACCCACGCTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA ACCGTACCTGTGAGTGGTACGAAACATGAGTTGTATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGAAAAGGCATTT CAAGATGAAGAAGGGGAGGGGGGAGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGG TATCCAAGTGGACCTTATTCGTGCGTTTTGCGCTTATTTTTTCTATTATTTTTTTGGTGTGTTGAATGAAAATGA AGGACGTCGAGGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACTGAGGAAAAAGGGGTGCAT GTGGTTGGAATCAGTTTGGGAGGGATGATTGCTCAGGGTGAGTCATCATTTTTCTGCATTCTTGTGAATCTCATG AGGTGGTAGAATTGGCATGGAGGATACCCGAAAGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGAT GGTTTTGGAACAACATACCCCCGGTAATTGATTTATTTTACGTCTACTTGAACGTGATTAACATCGTAATAATAG TGGAAAGGCGCAATGAGTTTAACAAAGTTAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGAT ATGCTGTACACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAG GAGGTGAGTTTACGTGTTTTGTGATGGTGAAAAGGGTATTGAAGTGTGGGGTAGGCGTTTTTACGCCGGGTGGCG ATAACGAAGAAGCAGCGATTAAAAGGGCATGTATCGCAGATGGTGGCGGGGTTGACGCACCATGTGTCGGCTGAG CGGCTGAGGCAGATTGGGGAAGGGGTGGGGCGGGTAGCGATTGTGGTGGGGGACGAGGACCATCTGGTATGGCGG GAGGGGTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGGAATACCGGGCACGGGATC CACGTGCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGTGCACGTGGTGTGTAG |