Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|076660
Gene name
Locationscaffold_4:2672377..2674208
Strand+
Gene length (bp)1831
Transcript length (bp)1161
Coding sequence length (bp)1161
Protein length (aa) 387

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00557 Peptidase_M24 Metallopeptidase family M24 2.3E-49 146 375
PF15801 zf-C6H2 zf-MYND-like zinc finger, mRNA-binding 5.0E-10 7 45

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q4QRK0|MAP11_DANRE Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2 7 383 2.0E-142
sp|Q5RBF3|MAP1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 6 383 1.0E-141
sp|P53582|MAP11_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 6 383 2.0E-141
sp|A6QLA4|MAP1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 6 383 4.0E-141
sp|Q8BP48|MAP11_MOUSE Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=1 SV=1 6 383 1.0E-140
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q4QRK0|MAP11_DANRE Methionine aminopeptidase 1 OS=Danio rerio GN=metap1 PE=2 SV=2 7 383 2.0E-142
sp|Q5RBF3|MAP1_PONAB Methionine aminopeptidase 1 OS=Pongo abelii GN=METAP1 PE=2 SV=1 6 383 1.0E-141
sp|P53582|MAP11_HUMAN Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2 6 383 2.0E-141
sp|A6QLA4|MAP1_BOVIN Methionine aminopeptidase 1 OS=Bos taurus GN=METAP1 PE=2 SV=1 6 383 4.0E-141
sp|Q8BP48|MAP11_MOUSE Methionine aminopeptidase 1 OS=Mus musculus GN=Metap1 PE=1 SV=1 6 383 1.0E-140
sp|Q5ZIM5|MAP1_CHICK Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1 6 383 1.0E-140
sp|Q5I0A0|MAP1_XENTR Methionine aminopeptidase 1 OS=Xenopus tropicalis GN=metap1 PE=2 SV=1 4 383 9.0E-140
sp|Q7ZWV9|MAP1_XENLA Methionine aminopeptidase 1 OS=Xenopus laevis GN=metap1 PE=2 SV=2 4 382 4.0E-136
sp|Q01662|MAP1_YEAST Methionine aminopeptidase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAP1 PE=1 SV=2 3 386 1.0E-131
sp|O59730|MAP1_SCHPO Methionine aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fma1 PE=1 SV=1 1 382 5.0E-131
sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1 2 382 7.0E-128
sp|Q54WU3|MAP11_DICDI Methionine aminopeptidase 1 OS=Dictyostelium discoideum GN=metap1 PE=3 SV=1 5 383 2.0E-118
sp|Q9FV50|MAP1D_ARATH Methionine aminopeptidase 1D, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1D PE=1 SV=1 97 383 3.0E-83
sp|Q9FV52|MAP1B_ARATH Methionine aminopeptidase 1B, chloroplastic OS=Arabidopsis thaliana GN=MAP1B PE=2 SV=2 105 383 4.0E-82
sp|Q54VU7|MAP12_DICDI Methionine aminopeptidase 1D, mitochondrial OS=Dictyostelium discoideum GN=metap1d PE=3 SV=1 105 383 5.0E-82
sp|P0A5J3|MAP1_MYCBO Methionine aminopeptidase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=map PE=3 SV=1 105 382 1.0E-79
sp|P9WK19|MAP12_MYCTU Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=map PE=1 SV=1 105 382 1.0E-79
sp|P9WK18|MAP12_MYCTO Methionine aminopeptidase 2 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=map PE=3 SV=1 105 382 1.0E-79
sp|Q9CPW9|MAP12_MOUSE Methionine aminopeptidase 1D, mitochondrial OS=Mus musculus GN=Metap1d PE=2 SV=1 87 383 4.0E-78
sp|Q4VBS4|MAP12_DANRE Methionine aminopeptidase 1D, mitochondrial OS=Danio rerio GN=metap1d PE=2 SV=1 99 383 9.0E-78
sp|Q6UB28|MAP12_HUMAN Methionine aminopeptidase 1D, mitochondrial OS=Homo sapiens GN=METAP1D PE=1 SV=1 105 383 2.0E-76
sp|Q9FV51|MAP1C_ARATH Methionine aminopeptidase 1C, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=MAP1C PE=2 SV=2 105 382 1.0E-72
sp|P53579|MAP11_SYNY3 Methionine aminopeptidase A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0918 PE=3 SV=1 133 385 1.0E-68
sp|Q9ZCD3|MAP1_RICPR Methionine aminopeptidase OS=Rickettsia prowazekii (strain Madrid E) GN=map PE=1 SV=1 147 382 1.0E-66
sp|Q9PL68|MAP1_CHLMU Methionine aminopeptidase OS=Chlamydia muridarum (strain MoPn / Nigg) GN=map PE=3 SV=2 114 382 8.0E-61
sp|P44421|MAP1_HAEIN Methionine aminopeptidase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=map PE=3 SV=1 147 382 6.0E-60
sp|O84859|MAP1_CHLTR Methionine aminopeptidase OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=map PE=3 SV=1 114 382 2.0E-59
sp|P0AE21|MAP1_SHIFL Methionine aminopeptidase OS=Shigella flexneri GN=map PE=3 SV=1 146 382 4.0E-59
sp|P0AE18|MAP1_ECOLI Methionine aminopeptidase OS=Escherichia coli (strain K12) GN=map PE=1 SV=1 146 382 4.0E-59
sp|P0AE19|MAP1_ECOL6 Methionine aminopeptidase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=map PE=3 SV=1 146 382 4.0E-59
sp|P0AE20|MAP1_ECO57 Methionine aminopeptidase OS=Escherichia coli O157:H7 GN=map PE=3 SV=1 146 382 4.0E-59
sp|P0A1X6|MAP1_SALTY Methionine aminopeptidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=map PE=1 SV=2 142 382 6.0E-59
sp|P0A1X7|MAP1_SALTI Methionine aminopeptidase OS=Salmonella typhi GN=map PE=3 SV=2 142 382 6.0E-59
sp|Q9Z6Q0|MAP1_CHLPN Methionine aminopeptidase OS=Chlamydia pneumoniae GN=map PE=3 SV=1 139 382 9.0E-59
sp|Q8K9T1|MAP1_BUCAP Methionine aminopeptidase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=map PE=3 SV=1 139 382 8.0E-57
sp|P57324|MAP1_BUCAI Methionine aminopeptidase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=map PE=3 SV=1 143 382 1.0E-56
sp|P53580|MAP12_SYNY3 Methionine aminopeptidase B OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0786 PE=3 SV=1 131 382 3.0E-56
sp|Q9Z9J4|MAP1_BACHD Methionine aminopeptidase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=map PE=3 SV=1 166 383 2.0E-55
sp|P19994|MAP11_BACSU Methionine aminopeptidase 1 OS=Bacillus subtilis (strain 168) GN=map PE=1 SV=1 166 383 3.0E-55
sp|Q89AP3|MAP1_BUCBP Methionine aminopeptidase OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=map PE=3 SV=1 144 386 3.0E-52
sp|P69000|MAP1_CLOAB Methionine aminopeptidase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=map PE=3 SV=1 139 382 3.0E-46
sp|P50614|MAP1_CLOPE Methionine aminopeptidase OS=Clostridium perfringens (strain 13 / Type A) GN=map PE=3 SV=2 144 382 1.0E-45
sp|P53581|MAP13_SYNY3 Methionine aminopeptidase C OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0555 PE=3 SV=1 138 382 3.0E-44
sp|O66489|MAP1_AQUAE Methionine aminopeptidase OS=Aquifex aeolicus (strain VF5) GN=map PE=3 SV=1 144 383 3.0E-40
sp|O51132|MAP1_BORBU Methionine aminopeptidase OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=map PE=3 SV=1 166 375 7.0E-39
sp|Q59509|MAP1_MYCCT Methionine aminopeptidase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=map PE=3 SV=2 139 386 4.0E-37
sp|Q9ZJT0|MAP1_HELPJ Methionine aminopeptidase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=map PE=3 SV=1 144 383 6.0E-37
sp|P56102|MAP1_HELPY Methionine aminopeptidase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=map PE=3 SV=1 144 383 1.0E-36
sp|O83814|MAP1_TREPA Methionine aminopeptidase OS=Treponema pallidum (strain Nichols) GN=map PE=3 SV=1 138 383 2.0E-36
sp|P0A079|MAP1_STAAW Methionine aminopeptidase OS=Staphylococcus aureus (strain MW2) GN=map PE=3 SV=1 145 383 3.0E-36
sp|Q6G846|MAP1_STAAS Methionine aminopeptidase OS=Staphylococcus aureus (strain MSSA476) GN=map PE=3 SV=1 145 383 3.0E-36
sp|Q6GFG9|MAP1_STAAR Methionine aminopeptidase OS=Staphylococcus aureus (strain MRSA252) GN=map PE=3 SV=1 145 383 3.0E-36
sp|P99121|MAP1_STAAN Methionine aminopeptidase OS=Staphylococcus aureus (strain N315) GN=map PE=1 SV=1 145 383 3.0E-36
sp|P0A078|MAP1_STAAM Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=map PE=1 SV=1 145 383 3.0E-36
sp|Q5HEN6|MAP1_STAAC Methionine aminopeptidase OS=Staphylococcus aureus (strain COL) GN=map PE=3 SV=1 145 383 3.0E-36
sp|P0A080|MAP1_STAA1 Methionine aminopeptidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=map PE=3 SV=1 145 383 3.0E-36
sp|Q8CRU9|MAP1_STAES Methionine aminopeptidase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=map PE=3 SV=2 144 383 1.0E-35
sp|Q5HN46|MAP1_STAEQ Methionine aminopeptidase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=map PE=3 SV=1 144 383 1.0E-35
sp|P9WK21|MAP11_MYCTU Methionine aminopeptidase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=map-1 PE=1 SV=1 168 384 1.0E-34
sp|P9WK20|MAP11_MYCTO Methionine aminopeptidase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=map-1 PE=3 SV=1 168 384 1.0E-34
sp|O34484|MAP12_BACSU Methionine aminopeptidase 2 OS=Bacillus subtilis (strain 168) GN=mapB PE=1 SV=1 146 383 6.0E-28
sp|Q11132|MAP1_MYCPN Methionine aminopeptidase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=map PE=3 SV=1 140 382 9.0E-18
sp|P56218|MAP2_PYRFU Methionine aminopeptidase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=map PE=1 SV=1 146 342 2.0E-17
sp|Q5JGD1|MAP2_THEKO Methionine aminopeptidase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=map PE=3 SV=1 144 342 5.0E-17
sp|O28438|MAP2_ARCFU Methionine aminopeptidase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=map PE=3 SV=1 140 338 5.0E-17
sp|Q9UYT4|MAP2_PYRAB Methionine aminopeptidase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=map PE=3 SV=1 146 342 3.0E-16
sp|B6YTG0|MAP2_THEON Methionine aminopeptidase OS=Thermococcus onnurineus (strain NA1) GN=map PE=1 SV=1 144 342 2.0E-15
sp|O27355|MAP2_METTH Methionine aminopeptidase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=map PE=3 SV=1 149 342 2.0E-15
sp|O58362|MAP2_PYRHO Methionine aminopeptidase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=map PE=3 SV=1 146 342 2.0E-15
sp|P47418|MAP1_MYCGE Methionine aminopeptidase OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=map PE=3 SV=1 175 382 2.0E-13
sp|O52353|MAP1_MYCGA Methionine aminopeptidase OS=Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) GN=map PE=3 SV=2 144 382 2.0E-13
sp|P95963|MAP2_SULSO Methionine aminopeptidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=map PE=3 SV=1 144 338 4.0E-12
sp|P9WHS7|PEPE_MYCTU Probable dipeptidase PepE OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=pepE PE=1 SV=1 212 377 9.0E-12
sp|P9WHS6|PEPE_MYCTO Probable dipeptidase PepE OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=pepE PE=3 SV=1 212 377 9.0E-12
sp|P65811|PEPE_MYCBO Probable dipeptidase PepE OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pepE PE=3 SV=1 212 377 9.0E-12
sp|P81535|PEPQ_PYRFU Xaa-Pro dipeptidase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pepQ PE=1 SV=1 198 386 2.0E-11
sp|Q2YTD2|Y1567_STAAB Uncharacterized peptidase SAB1567 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB1567 PE=3 SV=2 135 386 2.0E-11
sp|Q99TF5|Y1708_STAAM Uncharacterized peptidase SAV1708 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV1708 PE=3 SV=2 135 386 3.0E-11
sp|Q6G8L9|Y1635_STAAS Uncharacterized peptidase SAS1635 OS=Staphylococcus aureus (strain MSSA476) GN=SAS1635 PE=3 SV=1 135 386 3.0E-11
sp|Q7A552|Y1530_STAAN Uncharacterized peptidase SA1530 OS=Staphylococcus aureus (strain N315) GN=SA1530 PE=1 SV=2 135 386 3.0E-11
sp|Q8CNW9|Y1383_STAES Uncharacterized peptidase SE_1383 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1383 PE=3 SV=2 148 386 5.0E-11
sp|Q5HNJ7|Y1271_STAEQ Uncharacterized peptidase SERP1271 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1271 PE=3 SV=1 148 386 5.0E-11
sp|P22624|MAP2_METFE Methionine aminopeptidase (Fragment) OS=Methanothermus fervidus GN=map PE=3 SV=1 146 317 6.0E-11
sp|Q8NW55|Y1651_STAAW Uncharacterized peptidase MW1651 OS=Staphylococcus aureus (strain MW2) GN=MW1651 PE=3 SV=1 133 386 7.0E-11
sp|Q2FXL9|Y1816_STAA8 Uncharacterized peptidase SAOUHSC_01816 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_01816 PE=3 SV=1 133 386 9.0E-11
sp|Q5HF67|Y1756_STAAC Uncharacterized peptidase SACOL1756 OS=Staphylococcus aureus (strain COL) GN=SACOL1756 PE=3 SV=1 133 386 9.0E-11
sp|Q2FG30|Y1654_STAA3 Uncharacterized peptidase SAUSA300_1654 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_1654 PE=3 SV=1 133 386 9.0E-11
sp|Q49YD7|Y1059_STAS1 Uncharacterized peptidase SSP1059 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1059 PE=3 SV=1 139 386 9.0E-11
sp|Q6GFZ9|Y1786_STAAR Uncharacterized peptidase SAR1786 OS=Staphylococcus aureus (strain MRSA252) GN=SAR1786 PE=3 SV=1 133 386 2.0E-10
sp|O58885|PEPQ_PYRHO Xaa-Pro dipeptidase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pepQ PE=1 SV=1 198 386 4.0E-10
sp|P54518|YQHT_BACSU Uncharacterized peptidase YqhT OS=Bacillus subtilis (strain 168) GN=yqhT PE=3 SV=1 138 382 7.0E-10
sp|Q4L749|Y1217_STAHJ Uncharacterized peptidase SH1217 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1217 PE=3 SV=1 139 386 3.0E-09
sp|O31689|YKVY_BACSU Putative dipeptidase YkvY OS=Bacillus subtilis (strain 168) GN=ykvY PE=3 SV=1 133 339 4.0E-09
sp|P33111|YADK_MICLU Uncharacterized protein in adk 3'region (Fragment) OS=Micrococcus luteus PE=4 SV=1 157 215 4.0E-09
sp|Q9S6S1|PEPQ_LACDE Xaa-Pro dipeptidase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pepQ PE=1 SV=1 113 341 1.0E-08
sp|P46545|PEPQ_LACDL Xaa-Pro dipeptidase OS=Lactobacillus delbrueckii subsp. lactis GN=pepQ PE=3 SV=1 113 341 1.0E-08
sp|P0A3Z4|AMPP2_STRLI Xaa-Pro aminopeptidase 2 OS=Streptomyces lividans GN=pepP2 PE=3 SV=1 210 384 2.0E-07
sp|P0A3Z3|AMPP2_STRCO Xaa-Pro aminopeptidase 2 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=pepP2 PE=3 SV=1 210 384 2.0E-07
sp|A5DR89|MAP2_PICGU Methionine aminopeptidase 2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=MAP2 PE=3 SV=2 131 345 3.0E-07
sp|A5E5I9|MAP2_LODEL Methionine aminopeptidase 2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=MAP2 PE=3 SV=1 115 345 4.0E-07
sp|P15034|AMPP_ECOLI Xaa-Pro aminopeptidase OS=Escherichia coli (strain K12) GN=pepP PE=1 SV=2 167 382 5.0E-07
sp|P0A3Z2|AMPP1_STRLI Xaa-Pro aminopeptidase 1 OS=Streptomyces lividans GN=pepPI PE=1 SV=2 211 384 8.0E-07
sp|P0A3Z1|AMPP1_STRCO Xaa-Pro aminopeptidase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=pepPI PE=3 SV=2 211 384 8.0E-07
sp|Q6BVB8|MAP2_DEBHA Methionine aminopeptidase 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MAP2 PE=3 SV=2 131 345 8.0E-07
sp|A8QBZ2|MAP2_MALGO Methionine aminopeptidase 2 OS=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) GN=MGL_3955 PE=3 SV=1 148 345 1.0E-06
sp|P38487|CREA_BACB0 Creatinase OS=Bacillus sp. (strain B-0618) PE=1 SV=3 123 383 2.0E-06
sp|C4YSA9|MAP2_CANAW Methionine aminopeptidase 2 OS=Candida albicans (strain WO-1) GN=MAP2 PE=3 SV=1 131 345 2.0E-06
sp|Q59LF9|MAP2_CANAL Methionine aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MAP2 PE=3 SV=1 131 345 2.0E-06
sp|O84913|PEPQ_LACHE Xaa-Pro dipeptidase OS=Lactobacillus helveticus GN=pepQ PE=3 SV=1 115 341 3.0E-06
sp|Q58216|Y806_METJA Uncharacterized peptidase MJ0806 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0806 PE=3 SV=1 212 385 3.0E-06
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 59.22 34.92 83.52
Initials Initials knots 53.31 31.38 75.24
Pileal_Stipeal_center Stage I stipe center 47.17 27.38 66.97
Pileal_Stipeal_shell Stage I stipe shell 46.16 26.86 65.46
DIF_stipe_center Stage II stipe center 46.79 27.28 66.30
DIF_stipe_shell Stage II stipe shell 49.12 28.70 69.55
DIF_stipe_skin Stage II stipe skin 49.26 28.67 69.84
DIF_cap_skin Stage II cap skin 45.95 26.69 65.21
DIF_cap_tissue Stage II cap tissue 46.98 27.35 66.60
DIF_gill_tissue Stage II gill tissue 51.13 29.86 72.40
YFB_stipe_center Young fruiting body stipe center 51.86 30.35 73.37
YFB_stipe_shell Young fruiting body stipe shell 50.33 29.48 71.18
YFB_stipe_skin Young fruiting body stipe skin 49.71 29.10 70.32
YFB_cap_skin Young fruiting body cap skin 38.60 22.21 54.99
YFB_cap_tissue Young fruiting body cap tissue 35.49 20.11 50.86
YFB_gill_tissue Young fruiting body gill tissue 40.01 23.03 57.00
YFB_veil Young fruiting body veil 43.41 25.24 61.59

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.728588 no
Casing YFB_stipe_center 0.759404 no
Casing YFB_stipe_shell 0.692582 no
Casing YFB_stipe_skin 0.657229 no
Casing YFB_cap_skin 0.145002 no
Casing YFB_cap_tissue 0.075016 no
Casing YFB_gill_tissue 0.201033 no
Casing YFB_veil 0.323512 no
Casing Initials 0.815904 no
Casing Pileal_Stipeal_center 0.531367 no
Casing Pileal_Stipeal_shell 0.473320 no
Casing DIF_stipe_center 0.508783 no
Casing DIF_stipe_shell 0.627627 no
Casing DIF_stipe_skin 0.636230 no
Casing DIF_cap_skin 0.465313 no
Casing DIF_cap_tissue 0.518034 no
DIF_gill_tissue YFB_stipe_center 0.979835 no
DIF_gill_tissue YFB_stipe_shell 0.978251 no
DIF_gill_tissue YFB_stipe_skin 0.959217 no
DIF_gill_tissue YFB_cap_skin 0.424488 no
DIF_gill_tissue YFB_cap_tissue 0.267165 no
DIF_gill_tissue YFB_gill_tissue 0.507128 no
DIF_gill_tissue YFB_veil 0.691692 no
YFB_stipe_center YFB_stipe_shell 0.958944 no
YFB_stipe_center YFB_stipe_skin 0.940333 no
YFB_stipe_center YFB_cap_skin 0.393658 no
YFB_stipe_center YFB_cap_tissue 0.237227 no
YFB_stipe_center YFB_gill_tissue 0.477990 no
YFB_stipe_center YFB_veil 0.656886 no
YFB_stipe_shell YFB_stipe_skin 0.982365 no
YFB_stipe_shell YFB_cap_skin 0.457845 no
YFB_stipe_shell YFB_cap_tissue 0.286222 no
YFB_stipe_shell YFB_gill_tissue 0.544686 no
YFB_stipe_shell YFB_veil 0.732737 no
YFB_stipe_skin YFB_cap_skin 0.480401 no
YFB_stipe_skin YFB_cap_tissue 0.309178 no
YFB_stipe_skin YFB_gill_tissue 0.568793 no
YFB_stipe_skin YFB_veil 0.754872 no
YFB_cap_skin YFB_cap_tissue 0.874059 no
YFB_cap_skin YFB_gill_tissue 0.950160 no
YFB_cap_skin YFB_veil 0.801138 no
YFB_cap_tissue YFB_gill_tissue 0.806666 no
YFB_cap_tissue YFB_veil 0.613603 no
YFB_gill_tissue YFB_veil 0.871333 no
Initials DIF_gill_tissue 0.940629 no
Initials YFB_stipe_center 0.960002 no
Initials YFB_stipe_shell 0.913456 no
Initials YFB_stipe_skin 0.889985 no
Initials YFB_cap_skin 0.321090 no
Initials YFB_cap_tissue 0.183436 no
Initials YFB_gill_tissue 0.401168 no
Initials YFB_veil 0.581062 no
Initials Pileal_Stipeal_center 0.785771 no
Initials Pileal_Stipeal_shell 0.735800 no
Initials DIF_stipe_center 0.763522 no
Initials DIF_stipe_shell 0.867943 no
Initials DIF_stipe_skin 0.872631 no
Initials DIF_cap_skin 0.724119 no
Initials DIF_cap_tissue 0.774605 no
Pileal_Stipeal_center DIF_gill_tissue 0.874488 no
Pileal_Stipeal_center YFB_stipe_center 0.846467 no
Pileal_Stipeal_center YFB_stipe_shell 0.903620 no
Pileal_Stipeal_center YFB_stipe_skin 0.923568 no
Pileal_Stipeal_center YFB_cap_skin 0.610621 no
Pileal_Stipeal_center YFB_cap_tissue 0.419859 no
Pileal_Stipeal_center YFB_gill_tissue 0.696428 no
Pileal_Stipeal_center YFB_veil 0.868745 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.969717 no
Pileal_Stipeal_center DIF_stipe_center 0.987861 no
Pileal_Stipeal_center DIF_stipe_shell 0.941677 no
Pileal_Stipeal_center DIF_stipe_skin 0.937293 no
Pileal_Stipeal_center DIF_cap_skin 0.963050 no
Pileal_Stipeal_center DIF_cap_tissue 0.993790 no
Pileal_Stipeal_shell DIF_gill_tissue 0.829206 no
Pileal_Stipeal_shell YFB_stipe_center 0.796676 no
Pileal_Stipeal_shell YFB_stipe_shell 0.859887 no
Pileal_Stipeal_shell YFB_stipe_skin 0.880284 no
Pileal_Stipeal_shell YFB_cap_skin 0.658823 no
Pileal_Stipeal_shell YFB_cap_tissue 0.466236 no
Pileal_Stipeal_shell YFB_gill_tissue 0.744421 no
Pileal_Stipeal_shell YFB_veil 0.904596 no
Pileal_Stipeal_shell DIF_stipe_center 0.979678 no
Pileal_Stipeal_shell DIF_stipe_shell 0.903887 no
Pileal_Stipeal_shell DIF_stipe_skin 0.898195 no
Pileal_Stipeal_shell DIF_cap_skin 0.993078 no
Pileal_Stipeal_shell DIF_cap_tissue 0.974385 no
DIF_stipe_center DIF_gill_tissue 0.858021 no
DIF_stipe_center YFB_stipe_center 0.827289 no
DIF_stipe_center YFB_stipe_shell 0.888210 no
DIF_stipe_center YFB_stipe_skin 0.909357 no
DIF_stipe_center YFB_cap_skin 0.632672 no
DIF_stipe_center YFB_cap_tissue 0.442326 no
DIF_stipe_center YFB_gill_tissue 0.716087 no
DIF_stipe_center YFB_veil 0.883160 no
DIF_stipe_center DIF_stipe_shell 0.928804 no
DIF_stipe_center DIF_stipe_skin 0.924631 no
DIF_stipe_center DIF_cap_skin 0.975035 no
DIF_stipe_center DIF_cap_tissue 0.993761 no
DIF_stipe_shell DIF_gill_tissue 0.941459 no
DIF_stipe_shell YFB_stipe_center 0.918050 no
DIF_stipe_shell YFB_stipe_shell 0.964803 no
DIF_stipe_shell YFB_stipe_skin 0.982325 no
DIF_stipe_shell YFB_cap_skin 0.510874 no
DIF_stipe_shell YFB_cap_tissue 0.335521 no
DIF_stipe_shell YFB_gill_tissue 0.600995 no
DIF_stipe_shell YFB_veil 0.782950 no
DIF_stipe_shell DIF_stipe_skin 0.995627 no
DIF_stipe_shell DIF_cap_skin 0.897695 no
DIF_stipe_shell DIF_cap_tissue 0.933486 no
DIF_stipe_skin DIF_gill_tissue 0.949823 no
DIF_stipe_skin YFB_stipe_center 0.925892 no
DIF_stipe_skin YFB_stipe_shell 0.970864 no
DIF_stipe_skin YFB_stipe_skin 0.986527 no
DIF_stipe_skin YFB_cap_skin 0.508742 no
DIF_stipe_skin YFB_cap_tissue 0.330035 no
DIF_stipe_skin YFB_gill_tissue 0.594074 no
DIF_stipe_skin YFB_veil 0.780444 no
DIF_stipe_skin DIF_cap_skin 0.894899 no
DIF_stipe_skin DIF_cap_tissue 0.933438 no
DIF_cap_skin DIF_gill_tissue 0.821957 no
DIF_cap_skin YFB_stipe_center 0.789634 no
DIF_cap_skin YFB_stipe_shell 0.852815 no
DIF_cap_skin YFB_stipe_skin 0.873469 no
DIF_cap_skin YFB_cap_skin 0.674418 no
DIF_cap_skin YFB_cap_tissue 0.481755 no
DIF_cap_skin YFB_gill_tissue 0.758155 no
DIF_cap_skin YFB_veil 0.914807 no
DIF_cap_skin DIF_cap_tissue 0.969159 no
DIF_cap_tissue DIF_gill_tissue 0.865717 no
DIF_cap_tissue YFB_stipe_center 0.836779 no
DIF_cap_tissue YFB_stipe_shell 0.894796 no
DIF_cap_tissue YFB_stipe_skin 0.916129 no
DIF_cap_tissue YFB_cap_skin 0.621178 no
DIF_cap_tissue YFB_cap_tissue 0.431033 no
DIF_cap_tissue YFB_gill_tissue 0.707700 no
DIF_cap_tissue YFB_veil 0.874887 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|076660
MATSVACQSDSCPNGNPPSRLECPTCNKIGIKGSFFCGQECFKGACECWFCVESELSTFIRCAGKKHKILHDLAK
PGTLPTNSGDTFNPWVNFNFTGSLRPLYPLSPTREVPAHIPRPDYATDGIPKMEMRRMGQPPRILDSAEQEKMRT
VCKLGREILDIAAAAIRPGITTDEIDEIVHKATIERNAYPSPLNYRNFPKSVCTSVNEVICHGIPDQRKLQEGDI
VNLDISLYHDGVHGDLNETYPVGEIDEESKKLIRTTREALDAAITICKPGALFRDIGKVIEPIARTNGCAVVRTY
TGHGINDLFHCSPNIPHYAKNKAVGTMKPGMCFTIEPMINLGHNWGDIHWPDNWTATTVDGKRSAQFEDTLLITE
TGVEILTKGQK*
Coding >AgabiH97|076660
ATGGCCACTTCCGTCGCCTGCCAAAGCGACTCCTGCCCCAATGGAAACCCGCCTTCAAGACTAGAATGCCCAACT
TGTAATAAAATTGGGATTAAAGGTTCTTTTTTCTGCGGTCAAGAATGCTTCAAGGGTGCTTGTGAGTGTTGGTTT
TGTGTGGAATCTGAATTATCGACCTTTATTCGATGTGCAGGGAAAAAACACAAGATTCTACATGATCTAGCCAAA
CCAGGCACATTGCCCACGAACTCGGGTGACACATTTAATCCCTGGGTAAATTTCAACTTCACAGGATCTCTGAGG
CCTCTATATCCATTATCACCGACCCGTGAGGTCCCCGCACACATACCTCGGCCTGACTATGCGACAGATGGGATA
CCAAAAATGGAGATGCGTAGAATGGGACAACCGCCGCGTATACTTGATTCCGCAGAGCAGGAGAAGATGCGCACC
GTGTGCAAACTTGGTAGGGAGATTCTTGATATAGCTGCAGCTGCTATTCGTCCAGGTATTACCACCGATGAGATT
GATGAGATTGTGCATAAGGCTACCATCGAACGAAACGCTTATCCCTCGCCGCTCAACTATAGAAACTTTCCCAAG
TCGGTTTGCACCTCTGTCAATGAAGTCATCTGTCATGGTATTCCTGATCAGAGAAAATTGCAAGAGGGAGATATC
GTTAATTTAGATATCTCACTGTACCACGATGGAGTCCACGGCGACCTTAATGAAACATATCCCGTGGGTGAGATT
GATGAGGAATCTAAAAAGCTCATTCGTACGACGCGGGAGGCTCTTGACGCTGCAATCACGATATGTAAACCAGGT
GCCCTGTTCCGCGATATCGGAAAGGTCATAGAACCGATTGCGCGAACCAATGGATGTGCTGTTGTCCGAACATAT
ACGGGACATGGTATTAACGACCTCTTCCATTGCTCTCCTAACATTCCCCACTATGCAAAAAATAAAGCTGTTGGA
ACCATGAAGCCCGGGATGTGCTTTACGATAGAACCAATGATCAACCTCGGGCACAATTGGGGTGATATTCATTGG
CCTGATAATTGGACTGCTACGACCGTTGATGGCAAGCGCAGCGCTCAATTTGAAGATACACTCCTCATCACAGAA
ACTGGCGTCGAGATCTTGACAAAGGGCCAGAAGTGA
Transcript >AgabiH97|076660
ATGGCCACTTCCGTCGCCTGCCAAAGCGACTCCTGCCCCAATGGAAACCCGCCTTCAAGACTAGAATGCCCAACT
TGTAATAAAATTGGGATTAAAGGTTCTTTTTTCTGCGGTCAAGAATGCTTCAAGGGTGCTTGTGAGTGTTGGTTT
TGTGTGGAATCTGAATTATCGACCTTTATTCGATGTGCAGGGAAAAAACACAAGATTCTACATGATCTAGCCAAA
CCAGGCACATTGCCCACGAACTCGGGTGACACATTTAATCCCTGGGTAAATTTCAACTTCACAGGATCTCTGAGG
CCTCTATATCCATTATCACCGACCCGTGAGGTCCCCGCACACATACCTCGGCCTGACTATGCGACAGATGGGATA
CCAAAAATGGAGATGCGTAGAATGGGACAACCGCCGCGTATACTTGATTCCGCAGAGCAGGAGAAGATGCGCACC
GTGTGCAAACTTGGTAGGGAGATTCTTGATATAGCTGCAGCTGCTATTCGTCCAGGTATTACCACCGATGAGATT
GATGAGATTGTGCATAAGGCTACCATCGAACGAAACGCTTATCCCTCGCCGCTCAACTATAGAAACTTTCCCAAG
TCGGTTTGCACCTCTGTCAATGAAGTCATCTGTCATGGTATTCCTGATCAGAGAAAATTGCAAGAGGGAGATATC
GTTAATTTAGATATCTCACTGTACCACGATGGAGTCCACGGCGACCTTAATGAAACATATCCCGTGGGTGAGATT
GATGAGGAATCTAAAAAGCTCATTCGTACGACGCGGGAGGCTCTTGACGCTGCAATCACGATATGTAAACCAGGT
GCCCTGTTCCGCGATATCGGAAAGGTCATAGAACCGATTGCGCGAACCAATGGATGTGCTGTTGTCCGAACATAT
ACGGGACATGGTATTAACGACCTCTTCCATTGCTCTCCTAACATTCCCCACTATGCAAAAAATAAAGCTGTTGGA
ACCATGAAGCCCGGGATGTGCTTTACGATAGAACCAATGATCAACCTCGGGCACAATTGGGGTGATATTCATTGG
CCTGATAATTGGACTGCTACGACCGTTGATGGCAAGCGCAGCGCTCAATTTGAAGATACACTCCTCATCACAGAA
ACTGGCGTCGAGATCTTGACAAAGGGCCAGAAGTGA
Gene >AgabiH97|076660
ATGGCCACTTCCGTCGCCTGCCAAAGCGACTCCTGCCCCAATGGAAACCCGCCTTCAAGACTAGAATGCCCAACT
TGTAATAAGTAAGTTGGCTCTATTTCGGCTTAATCCCTCCACCTACTTATTAATCAGAATTGGGATTAAAGGTTC
TTTTTTCTGCGGTCAAGAATGCTTCAAGGGTGCTTGTGAGTGTTGGTTTTGTGTGGAATCTGAATTATCGACCTT
TATTCGATGTGCAGGGGTATGCTTTTCGCACTTTCGGCTGGATGTAACAAGCTGTCTCAACAACGTGTATTAGAA
AAAACACAAGATTCTACATGATCTAGCCAAACCAGGCACATTGCCCACGAACTCGGGTACGATCGCATATGGATC
TTATGTCGTAGAAGTCACTCATCCACCTTTCATTTGTCCTCTAGGTGACACATTTAATCCCTGGGTAAATTTCAA
CTTCACAGGATCTCTGAGGCCTCTATATCCATTATCACCGACCCGTGAGGTCCCCGCACACATACCTCGGCCTGA
CTATGCGACAGATGGTCAGTGATTCACGCCCACGCTTTATCGCTTCTTCTCATAGTTATAGGGATACCAAAAATG
GAGATGCGTAGAATGGGACAACCGCCGCGTATACTTGATTCCGCAGAGCAGGAGAAGATGCGCACCGTGTGCAAA
GTACGTCTGACCCAAGCTATTTTGATTGCCATTCCGACGTTTGATACATCAACCACGTAGCTTGGTAGGGAGATT
CTTGATATAGCTGCAGCTGCTATTCGTCCAGGTATTACCACCGATGAGATTGATGAGATTGTGCATAAGGCTACC
ATCGAACGAAACGCTTATCCCTCGCCGCTCAACTATAGAAACTTTCCCAAGTCGGTTTGCACGTAAGTTATTCAT
ATTACTAGTCTATGCCCTGGTCGAATCGCTCGTCCAGTTGACGACGACTGCGTTTCAGCTCTGTCAATGAAGTCA
TCTGTCATGGTATTCCTGATCAGAGAAAATTGCAAGAGGGAGATATCGTTAATTTAGGTCGGTTTGCTTTCTCCG
TAGTGGGAATGAAATGGACTGATGTGTGCCATTAGATATCTCACTGTACCACGATGGCGAGTGCCGAGGTTATCA
GCGTATCTTCCCCGGCTAAAGCATTCACGACACAGGAGTCCACGGCGACCTTAATGAAACATATCCCGTGGGTGA
GATTGATGAGGAATCTAAAAAGCTCATTCGTACGACGCGGGAGGCTCTTGACGCTGCAATCACGATATGTAAACC
AGGTGCCCTGTTCCGCGATATCGGAAAGGTCATGTTAGTACCGCCTAGTTCGATTTGGTATTACATTCAGCCGCT
CATTTCTAATTCAGAGAACCGATTGCGCGAACCAATGGATGTGCTGTTGTCCGAACATATACGGGACATGGTATT
AACGACCTCTTCCATTGCTCTCCTAACATTCCCCACTATGCAAAAAATAAAGCTGTTGGAACCATGAAGCCCGGG
ATGGTGAGCGTTCATTTATGACTACTTGTAGAAACAGAGTATACTCAAGAGGCGTTTGCAGTGCTTTACGATAGA
ACCAGTATGTTGTCCGCCAGCCACTTAGAACTATTGAAAATTACTTTCCCAAGATGATCAACCTCGGGCACAATT
GGGGTGATATTCATTGGCCTGATAATTGGACTGCTACGACCGTTGATGGCAAGCGCAGCGCTCAATTTGAAGATA
CACTCCTGTATGTACAATAAATTGCGAGTATGATGAACGAAAAAGCTCATTGGTTATCAGCATCACAGAAACTGG
CGTCGAGATCTTGACAAAGGGCCAGAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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