© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|076430 |
| Gene name | |
| Location | scaffold_4:2611145..2612788 |
| Strand | + |
| Gene length (bp) | 1643 |
| Transcript length (bp) | 1257 |
| Coding sequence length (bp) | 1257 |
| Protein length (aa) | 419 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00441 | Acyl-CoA_dh_1 | Acyl-CoA dehydrogenase, C-terminal domain | 1.3E-45 | 265 | 412 |
| PF02771 | Acyl-CoA_dh_N | Acyl-CoA dehydrogenase, N-terminal domain | 1.6E-29 | 44 | 154 |
| PF08028 | Acyl-CoA_dh_2 | Acyl-CoA dehydrogenase, C-terminal domain | 4.5E-22 | 280 | 402 |
| PF02770 | Acyl-CoA_dh_M | Acyl-CoA dehydrogenase, middle domain | 4.0E-22 | 159 | 252 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45954|ACDSB_HUMAN | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1 | 40 | 417 | 2.0E-170 |
| sp|Q5RF40|ACDSB_PONAB | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1 | 40 | 417 | 3.0E-170 |
| sp|P70584|ACDSB_RAT | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1 | 30 | 417 | 7.0E-166 |
| sp|Q9DBL1|ACDSB_MOUSE | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1 | 34 | 417 | 6.0E-165 |
| sp|Q5EAD4|ACDSB_BOVIN | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1 | 40 | 417 | 2.0E-160 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45954|ACDSB_HUMAN | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1 | 40 | 417 | 2.0E-170 |
| sp|Q5RF40|ACDSB_PONAB | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1 | 40 | 417 | 3.0E-170 |
| sp|P70584|ACDSB_RAT | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1 | 30 | 417 | 7.0E-166 |
| sp|Q9DBL1|ACDSB_MOUSE | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1 | 34 | 417 | 6.0E-165 |
| sp|Q5EAD4|ACDSB_BOVIN | Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1 | 40 | 417 | 2.0E-160 |
| sp|Q54RR5|ACDSB_DICDI | Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1 | 40 | 418 | 7.0E-153 |
| sp|P52042|ACDS_CLOAB | Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=bcd PE=1 SV=1 | 42 | 410 | 1.0E-105 |
| sp|P15651|ACADS_RAT | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2 | 43 | 417 | 8.0E-99 |
| sp|Q07417|ACADS_MOUSE | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=1 SV=2 | 43 | 417 | 2.0E-98 |
| sp|P45867|ACDA_BACSU | Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA PE=2 SV=1 | 42 | 413 | 1.0E-97 |
| sp|Q5RAS0|ACADS_PONAB | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1 | 43 | 417 | 1.0E-93 |
| sp|P16219|ACADS_HUMAN | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1 | 4 | 417 | 1.0E-93 |
| sp|P45857|ACDB_BACSU | Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC PE=2 SV=3 | 44 | 413 | 1.0E-92 |
| sp|Q3ZBF6|ACADS_BOVIN | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=1 SV=1 | 11 | 417 | 1.0E-91 |
| sp|P9WQG1|ACDP_MYCTU | Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=fadE25 PE=1 SV=1 | 39 | 405 | 6.0E-90 |
| sp|P9WQG0|ACDP_MYCTO | Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fadE25 PE=3 SV=1 | 39 | 405 | 6.0E-90 |
| sp|P63428|ACDP_MYCBO | Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1 | 39 | 405 | 6.0E-90 |
| sp|P79273|ACADS_PIG | Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1 | 11 | 417 | 6.0E-90 |
| sp|Q06319|ACDS_MEGEL | Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1 | 43 | 406 | 9.0E-86 |
| sp|P46703|ACDP_MYCLE | Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae (strain TN) GN=fadE25 PE=3 SV=1 | 43 | 405 | 5.0E-85 |
| sp|G3KIM8|ACRC_CLOPR | Acryloyl-CoA reductase (NADH) OS=Clostridium propionicum GN=acrC PE=1 SV=1 | 42 | 415 | 1.0E-82 |
| sp|O34421|ACDC_BACSU | Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain 168) GN=yngJ PE=3 SV=1 | 43 | 415 | 7.0E-80 |
| sp|Q54IM8|ACAD8_DICDI | Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1 | 36 | 416 | 7.0E-76 |
| sp|Q2LQN9|CH1CO_SYNAS | Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase OS=Syntrophus aciditrophicus (strain SB) GN=SYN_02587 PE=1 SV=1 | 12 | 404 | 1.0E-75 |
| sp|Q3SZI8|IVD_BOVIN | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD PE=2 SV=1 | 31 | 417 | 2.0E-74 |
| sp|Q5RBD5|IVD_PONAB | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD PE=2 SV=1 | 2 | 417 | 4.0E-73 |
| sp|P26440|IVD_HUMAN | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD PE=1 SV=1 | 2 | 417 | 5.0E-73 |
| sp|P12007|IVD_RAT | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ivd PE=1 SV=2 | 31 | 417 | 1.0E-72 |
| sp|Q9JHI5|IVD_MOUSE | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd PE=1 SV=1 | 13 | 417 | 5.0E-72 |
| sp|Q22347|ACADM_CAEEL | Probable medium-chain specific acyl-CoA dehydrogenase 10, mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2 SV=1 | 43 | 418 | 8.0E-70 |
| sp|P41367|ACADM_PIG | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADM PE=1 SV=3 | 1 | 411 | 2.0E-69 |
| sp|Q3SZB4|ACADM_BOVIN | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1 | 8 | 411 | 2.0E-69 |
| sp|Q75IM9|IVD_ORYSJ | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os05g0125500 PE=2 SV=2 | 35 | 416 | 4.0E-69 |
| sp|Q9VSA3|ACADM_DROME | Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1 SV=1 | 25 | 411 | 5.0E-69 |
| sp|P45952|ACADM_MOUSE | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadm PE=1 SV=1 | 4 | 415 | 3.0E-67 |
| sp|A8XNF0|ACAD1_CAEBR | Probable medium-chain specific acyl-CoA dehydrogenase 1, mitochondrial OS=Caenorhabditis briggsae GN=CBG15946 PE=3 SV=1 | 43 | 418 | 4.0E-67 |
| sp|P11310|ACADM_HUMAN | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADM PE=1 SV=1 | 43 | 411 | 6.0E-67 |
| sp|A5A6I0|ACADM_PANTR | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan troglodytes GN=ACADM PE=2 SV=1 | 43 | 411 | 8.0E-67 |
| sp|Q9UKU7|ACAD8_HUMAN | Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1 | 43 | 416 | 1.0E-66 |
| sp|P08503|ACADM_RAT | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadm PE=1 SV=1 | 4 | 415 | 5.0E-65 |
| sp|Q8HXY8|ACADM_MACFA | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADM PE=2 SV=1 | 4 | 411 | 6.0E-65 |
| sp|Q2LQP0|CHCOA_SYNAS | Cyclohexane-1-carbonyl-CoA dehydrogenase OS=Syntrophus aciditrophicus (strain SB) GN=SYN_02586 PE=1 SV=1 | 40 | 418 | 7.0E-65 |
| sp|Q8HXY7|ACADV_MACFA | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1 | 44 | 404 | 2.0E-64 |
| sp|Q9D7B6|ACAD8_MOUSE | Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acad8 PE=1 SV=2 | 43 | 411 | 4.0E-64 |
| sp|Q0NXR6|ACAD8_BOVIN | Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8 PE=2 SV=1 | 43 | 416 | 9.0E-64 |
| sp|P45953|ACADV_RAT | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1 | 49 | 404 | 2.0E-63 |
| sp|Q9FS88|MBCD_SOLTU | 2-methylacyl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=2MBCD PE=1 SV=2 | 12 | 416 | 2.0E-63 |
| sp|P48818|ACADV_BOVIN | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3 | 49 | 404 | 3.0E-63 |
| sp|Q9SWG0|IVD_ARATH | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=IVD PE=1 SV=2 | 50 | 416 | 6.0E-63 |
| sp|P49748|ACADV_HUMAN | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1 | 30 | 404 | 1.0E-62 |
| sp|Q9FS87|IVD_SOLTU | Isovaleryl-CoA dehydrogenase, mitochondrial OS=Solanum tuberosum GN=IVD PE=1 SV=2 | 3 | 416 | 2.0E-62 |
| sp|P50544|ACADV_MOUSE | Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadvl PE=1 SV=3 | 45 | 404 | 7.0E-62 |
| sp|C3UVB0|ACD_DESML | Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1 SV=1 | 42 | 410 | 1.0E-61 |
| sp|Q9H845|ACAD9_HUMAN | Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1 | 4 | 410 | 9.0E-61 |
| sp|A8WP91|ACAD2_CAEBR | Probable medium-chain specific acyl-CoA dehydrogenase 2, mitochondrial OS=Caenorhabditis briggsae GN=CBG00953 PE=3 SV=2 | 43 | 413 | 1.0E-60 |
| sp|P15650|ACADL_RAT | Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadl PE=1 SV=1 | 11 | 413 | 2.0E-56 |
| sp|P51174|ACADL_MOUSE | Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadl PE=1 SV=2 | 43 | 413 | 4.0E-56 |
| sp|Q8JZN5|ACAD9_MOUSE | Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=1 SV=2 | 67 | 404 | 5.0E-56 |
| sp|P79274|ACADL_PIG | Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1 | 43 | 413 | 2.0E-55 |
| sp|P28330|ACADL_HUMAN | Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=1 SV=2 | 43 | 413 | 7.0E-55 |
| sp|Q60HI0|ACADL_MACFA | Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADL PE=2 SV=1 | 43 | 413 | 1.0E-52 |
| sp|O32176|FADE_BACSU | Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=fadE PE=2 SV=1 | 23 | 415 | 3.0E-52 |
| sp|Q0T8F5|CAIA_SHIF8 | Crotonobetainyl-CoA dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=caiA PE=3 SV=1 | 68 | 417 | 5.0E-46 |
| sp|Q3Z5W9|CAIA_SHISS | Crotonobetainyl-CoA dehydrogenase OS=Shigella sonnei (strain Ss046) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|P60587|CAIA_SHIFL | Crotonobetainyl-CoA dehydrogenase OS=Shigella flexneri GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|Q32K58|CAIA_SHIDS | Crotonobetainyl-CoA dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7LWN0|CAIA_ESCF3 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|Q1RGF9|CAIA_ECOUT | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B1LFX2|CAIA_ECOSM | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B6HYZ0|CAIA_ECOSE | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain SE11) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7N7R4|CAIA_ECOLU | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|P60584|CAIA_ECOLI | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain K12) GN=caiA PE=1 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B1IRD7|CAIA_ECOLC | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|P60585|CAIA_ECOL6 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|A1A789|CAIA_ECOK1 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|A7ZVY9|CAIA_ECOHS | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B1XBG4|CAIA_ECODH | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|C4ZPW5|CAIA_ECOBW | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7MNP6|CAIA_ECO81 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7NHE3|CAIA_ECO7I | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B5YYD3|CAIA_ECO5E | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|P60586|CAIA_ECO57 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O157:H7 GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7L4G2|CAIA_ECO55 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7MAG2|CAIA_ECO45 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|B7UI85|CAIA_ECO27 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|A7ZHD0|CAIA_ECO24 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiA PE=3 SV=1 | 68 | 417 | 6.0E-46 |
| sp|Q0TLV0|CAIA_ECOL5 | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=caiA PE=3 SV=1 | 68 | 417 | 9.0E-46 |
| sp|B7M0D6|CAIA_ECO8A | Crotonobetainyl-CoA dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=caiA PE=3 SV=1 | 68 | 417 | 1.0E-45 |
| sp|Q8GB20|CAIA_PROSL | Crotonobetainyl-CoA dehydrogenase OS=Proteus sp. (strain LE138) GN=caiA PE=3 SV=1 | 43 | 417 | 1.0E-45 |
| sp|B4EY23|CAIA_PROMH | Crotonobetainyl-CoA dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=caiA PE=3 SV=1 | 43 | 417 | 1.0E-45 |
| sp|Q20772|GCDH_CAEEL | Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1 | 21 | 413 | 2.0E-45 |
| sp|A8ALR4|CAIA_CITK8 | Crotonobetainyl-CoA dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiA PE=3 SV=1 | 68 | 417 | 4.0E-45 |
| sp|A9MQH5|CAIA_SALAR | Crotonobetainyl-CoA dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiA PE=3 SV=1 | 68 | 417 | 2.0E-44 |
| sp|P63430|Y897_MYCBO | Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fadE10 PE=3 SV=1 | 80 | 411 | 2.0E-44 |
| sp|P9WQF7|Y873_MYCTU | Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=fadE10 PE=1 SV=1 | 80 | 411 | 2.0E-44 |
| sp|P9WQF6|Y873_MYCTO | Probable acyl-CoA dehydrogenase FadE10 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fadE10 PE=3 SV=1 | 80 | 411 | 2.0E-44 |
| sp|Q8ZRX2|CAIA_SALTY | Crotonobetainyl-CoA dehydrogenase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B4TWR6|CAIA_SALSV | Crotonobetainyl-CoA dehydrogenase OS=Salmonella schwarzengrund (strain CVM19633) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B5BL57|CAIA_SALPK | Crotonobetainyl-CoA dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|C0Q4L5|CAIA_SALPC | Crotonobetainyl-CoA dehydrogenase OS=Salmonella paratyphi C (strain RKS4594) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|A9MYJ9|CAIA_SALPB | Crotonobetainyl-CoA dehydrogenase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|Q5PIN6|CAIA_SALPA | Crotonobetainyl-CoA dehydrogenase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B4T6J8|CAIA_SALNS | Crotonobetainyl-CoA dehydrogenase OS=Salmonella newport (strain SL254) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B4TIH2|CAIA_SALHS | Crotonobetainyl-CoA dehydrogenase OS=Salmonella heidelberg (strain SL476) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B5RGA6|CAIA_SALG2 | Crotonobetainyl-CoA dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B5R1R2|CAIA_SALEP | Crotonobetainyl-CoA dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B5FHG7|CAIA_SALDC | Crotonobetainyl-CoA dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|Q57TI8|CAIA_SALCH | Crotonobetainyl-CoA dehydrogenase OS=Salmonella choleraesuis (strain SC-B67) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|B5F752|CAIA_SALA4 | Crotonobetainyl-CoA dehydrogenase OS=Salmonella agona (strain SL483) GN=caiA PE=3 SV=1 | 68 | 417 | 3.0E-44 |
| sp|Q54R47|GCDH_DICDI | Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1 | 37 | 413 | 4.0E-44 |
| sp|P34275|IVD_CAEEL | Probable acyl-CoA dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=3 SV=2 | 43 | 411 | 8.0E-44 |
| sp|Q8Z9L2|CAIA_SALTI | Crotonobetainyl-CoA dehydrogenase OS=Salmonella typhi GN=caiA PE=3 SV=1 | 68 | 417 | 8.0E-44 |
| sp|Q96329|ACOX4_ARATH | Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana GN=ACX4 PE=1 SV=1 | 41 | 405 | 8.0E-43 |
| sp|Q8HXX8|GCDH_MACFA | Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1 | 41 | 413 | 9.0E-40 |
| sp|P81140|GCDH_PIG | Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1 | 41 | 413 | 2.0E-39 |
| sp|Q2KHZ9|GCDH_BOVIN | Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH PE=2 SV=1 | 41 | 413 | 2.0E-39 |
| sp|Q92947|GCDH_HUMAN | Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1 | 41 | 413 | 2.0E-38 |
| sp|Q60759|GCDH_MOUSE | Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=1 SV=2 | 41 | 413 | 2.0E-37 |
| sp|P0A9U8|YDIO_ECOLI | Probable acyl-CoA dehydrogenase YdiO OS=Escherichia coli (strain K12) GN=ydiO PE=3 SV=1 | 42 | 417 | 9.0E-37 |
| sp|P0A9U9|YDIO_ECOL6 | Probable acyl-CoA dehydrogenase YdiO OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ydiO PE=3 SV=1 | 42 | 417 | 9.0E-37 |
| sp|P0A9V0|YDIO_ECO57 | Probable acyl-CoA dehydrogenase YdiO OS=Escherichia coli O157:H7 GN=ydiO PE=3 SV=1 | 42 | 417 | 9.0E-37 |
| sp|Q9KJE8|BBSG_THAAR | (R)-benzylsuccinyl-CoA dehydrogenase OS=Thauera aromatica GN=bbsG PE=1 SV=1 | 42 | 411 | 1.0E-36 |
| sp|Q7U0Y2|ACDC_MYCBO | Acyl-CoA dehydrogenase fadE12 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fadE12 PE=3 SV=1 | 44 | 411 | 5.0E-35 |
| sp|P9WQG3|ACDC_MYCTU | Acyl-CoA dehydrogenase fadE12 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=fadE12 PE=1 SV=1 | 44 | 411 | 6.0E-35 |
| sp|P9WQG2|ACDC_MYCTO | Acyl-CoA dehydrogenase fadE12 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fadE12 PE=3 SV=1 | 44 | 411 | 6.0E-35 |
| sp|Q8RWZ3|IBR3_ARATH | Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis thaliana GN=IBR3 PE=1 SV=1 | 125 | 412 | 1.0E-23 |
| sp|Q5ZHT1|ACD11_CHICK | Acyl-CoA dehydrogenase family member 11 OS=Gallus gallus GN=ACAD11 PE=2 SV=1 | 125 | 412 | 2.0E-23 |
| sp|Q709F0|ACD11_HUMAN | Acyl-CoA dehydrogenase family member 11 OS=Homo sapiens GN=ACAD11 PE=1 SV=2 | 100 | 410 | 3.0E-21 |
| sp|Q5R778|ACD11_PONAB | Acyl-CoA dehydrogenase family member 11 OS=Pongo abelii GN=ACAD11 PE=2 SV=2 | 125 | 410 | 5.0E-21 |
| sp|Q6JQN1|ACD10_HUMAN | Acyl-CoA dehydrogenase family member 10 OS=Homo sapiens GN=ACAD10 PE=1 SV=1 | 125 | 412 | 2.0E-20 |
| sp|B3DMA2|ACD11_RAT | Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus GN=Acad11 PE=1 SV=1 | 8 | 412 | 8.0E-20 |
| sp|Q80XL6|ACD11_MOUSE | Acyl-CoA dehydrogenase family member 11 OS=Mus musculus GN=Acad11 PE=1 SV=2 | 125 | 412 | 1.0E-18 |
| sp|Q8K370|ACD10_MOUSE | Acyl-CoA dehydrogenase family member 10 OS=Mus musculus GN=Acad10 PE=1 SV=1 | 125 | 418 | 2.0E-18 |
| sp|P33224|AIDB_ECOLI | Putative acyl-CoA dehydrogenase AidB OS=Escherichia coli (strain K12) GN=aidB PE=1 SV=3 | 162 | 416 | 6.0E-17 |
| sp|Q9DBS4|ACOXL_MOUSE | Acyl-coenzyme A oxidase-like protein OS=Mus musculus GN=Acoxl PE=1 SV=1 | 81 | 418 | 2.0E-16 |
| sp|Q9XWZ2|ACD11_CAEEL | Acyl-CoA dehydrogenase family member 11 OS=Caenorhabditis elegans GN=acdh-11 PE=1 SV=1 | 163 | 416 | 3.0E-16 |
| sp|Q8ZBY6|FADE_YERPE | Acyl-coenzyme A dehydrogenase OS=Yersinia pestis GN=fadE PE=3 SV=1 | 71 | 412 | 4.0E-16 |
| sp|Q5LLW7|DMDC_RUEPO | 3-methylmercaptopropionyl-CoA dehydrogenase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=dmdC PE=1 SV=1 | 96 | 405 | 1.0E-15 |
| sp|Q8X7R2|FADE_ECO57 | Acyl-coenzyme A dehydrogenase OS=Escherichia coli O157:H7 GN=fadE PE=3 SV=2 | 71 | 412 | 3.0E-15 |
| sp|Q47146|FADE_ECOLI | Acyl-coenzyme A dehydrogenase OS=Escherichia coli (strain K12) GN=fadE PE=2 SV=2 | 71 | 412 | 2.0E-14 |
| sp|Q9NUZ1|ACOXL_HUMAN | Acyl-coenzyme A oxidase-like protein OS=Homo sapiens GN=ACOXL PE=2 SV=3 | 105 | 418 | 5.0E-14 |
| sp|Q8ZRJ7|FADE_SALTY | Acyl-coenzyme A dehydrogenase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fadE PE=2 SV=1 | 71 | 412 | 6.0E-14 |
| sp|Q8Z937|FADE_SALTI | Acyl-coenzyme A dehydrogenase OS=Salmonella typhi GN=fadE PE=3 SV=1 | 71 | 412 | 1.0E-13 |
| sp|P96608|YDBM_BACSU | Putative acyl-CoA dehydrogenase YdbM OS=Bacillus subtilis (strain 168) GN=ydbM PE=2 SV=1 | 68 | 395 | 3.0E-13 |
| sp|O64894|ACOX2_CUCMA | Acyl-coenzyme A oxidase, peroxisomal OS=Cucurbita maxima GN=Acx PE=1 SV=1 | 110 | 417 | 7.0E-12 |
| sp|Q1BBA3|MBTN_MYCSS | Acyl-[acyl-carrier-protein] dehydrogenase MbtN OS=Mycobacterium sp. (strain MCS) GN=mbtN PE=3 SV=1 | 160 | 417 | 1.0E-11 |
| sp|Q8X1D8|NAO_FUSOX | Nitroalkane oxidase OS=Fusarium oxysporum PE=1 SV=1 | 86 | 407 | 3.0E-11 |
| sp|Q73ZP8|MBTN_MYCPA | Acyl-[acyl-carrier-protein] dehydrogenase MbtN OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=mbtN PE=3 SV=1 | 121 | 417 | 5.0E-11 |
| sp|O65201|ACOX2_ARATH | Acyl-coenzyme A oxidase 2, peroxisomal OS=Arabidopsis thaliana GN=ACX2 PE=1 SV=2 | 110 | 417 | 7.0E-11 |
| sp|P54998|SOXC_RHOSG | Dibenzothiophene desulfurization enzyme C OS=Rhodococcus sp. (strain IGTS8) GN=soxC PE=1 SV=1 | 83 | 402 | 1.0E-10 |
| sp|Q9EPL9|ACOX3_MOUSE | Peroxisomal acyl-coenzyme A oxidase 3 OS=Mus musculus GN=Acox3 PE=1 SV=2 | 55 | 413 | 4.0E-09 |
| sp|P9WQF9|MBTN_MYCTU | Acyl-[acyl-carrier-protein] dehydrogenase MbtN OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=mbtN PE=1 SV=1 | 121 | 417 | 4.0E-08 |
| sp|P9WQF8|MBTN_MYCTO | Acyl-[acyl-carrier-protein] dehydrogenase MbtN OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=mbtN PE=3 SV=1 | 121 | 417 | 4.0E-08 |
| sp|P63432|MBTN_MYCBO | Acyl-[acyl-carrier-protein] dehydrogenase MbtN OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=mbtN PE=3 SV=1 | 121 | 417 | 4.0E-08 |
| sp|P0CZ23|ACOX3_ARATH | Acyl-coenzyme A oxidase 3, peroxisomal OS=Arabidopsis thaliana GN=ACX3 PE=1 SV=1 | 108 | 417 | 7.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 67.29 | 40.25 | 94.32 |
| Initials | Initials knots | 92.12 | 55.29 | 128.96 |
| Pileal_Stipeal_center | Stage I stipe center | 107.88 | 64.68 | 151.08 |
| Pileal_Stipeal_shell | Stage I stipe shell | 118.03 | 70.64 | 165.42 |
| DIF_stipe_center | Stage II stipe center | 109.39 | 65.59 | 153.19 |
| DIF_stipe_shell | Stage II stipe shell | 126.43 | 75.34 | 177.52 |
| DIF_stipe_skin | Stage II stipe skin | 115.55 | 68.82 | 162.29 |
| DIF_cap_skin | Stage II cap skin | 110.55 | 66.34 | 154.76 |
| DIF_cap_tissue | Stage II cap tissue | 116.97 | 70.19 | 163.76 |
| DIF_gill_tissue | Stage II gill tissue | 105.47 | 63.19 | 147.75 |
| YFB_stipe_center | Young fruiting body stipe center | 96.91 | 58.06 | 135.76 |
| YFB_stipe_shell | Young fruiting body stipe shell | 103.28 | 61.90 | 144.67 |
| YFB_stipe_skin | Young fruiting body stipe skin | 109.23 | 65.55 | 152.90 |
| YFB_cap_skin | Young fruiting body cap skin | 117.58 | 70.47 | 164.68 |
| YFB_cap_tissue | Young fruiting body cap tissue | 87.17 | 52.28 | 122.06 |
| YFB_gill_tissue | Young fruiting body gill tissue | 133.82 | 78.64 | 189.00 |
| YFB_veil | Young fruiting body veil | 119.53 | 71.62 | 167.43 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.095802 | no |
| Casing | YFB_stipe_center | 0.207043 | no |
| Casing | YFB_stipe_shell | 0.121262 | no |
| Casing | YFB_stipe_skin | 0.074478 | no |
| Casing | YFB_cap_skin | 0.032978 | yes |
| Casing | YFB_cap_tissue | 0.430106 | no |
| Casing | YFB_gill_tissue | 0.006387 | yes |
| Casing | YFB_veil | 0.024946 | yes |
| Casing | Initials | 0.302979 | no |
| Casing | Pileal_Stipeal_center | 0.077879 | no |
| Casing | Pileal_Stipeal_shell | 0.032978 | yes |
| Casing | DIF_stipe_center | 0.069387 | no |
| Casing | DIF_stipe_shell | 0.013186 | yes |
| Casing | DIF_stipe_skin | 0.043121 | yes |
| Casing | DIF_cap_skin | 0.067520 | no |
| Casing | DIF_cap_tissue | 0.036228 | yes |
| DIF_gill_tissue | YFB_stipe_center | 0.856634 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.968647 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.947618 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.804056 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.601481 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.487126 | no |
| DIF_gill_tissue | YFB_veil | 0.765593 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.898874 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.779173 | no |
| YFB_stipe_center | YFB_cap_skin | 0.595013 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.814221 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.295714 | no |
| YFB_stipe_center | YFB_veil | 0.552744 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.912053 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.756489 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.655336 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.438079 | no |
| YFB_stipe_shell | YFB_veil | 0.717778 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.880313 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.510695 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.578239 | no |
| YFB_stipe_skin | YFB_veil | 0.845275 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.333527 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.761978 | no |
| YFB_cap_skin | YFB_veil | 0.976247 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.134002 | no |
| YFB_cap_tissue | YFB_veil | 0.301839 | no |
| YFB_gill_tissue | YFB_veil | 0.802589 | no |
| Initials | DIF_gill_tissue | 0.747052 | no |
| Initials | YFB_stipe_center | 0.921651 | no |
| Initials | YFB_stipe_shell | 0.792282 | no |
| Initials | YFB_stipe_skin | 0.656659 | no |
| Initials | YFB_cap_skin | 0.465177 | no |
| Initials | YFB_cap_tissue | 0.913336 | no |
| Initials | YFB_gill_tissue | 0.205767 | no |
| Initials | YFB_veil | 0.429814 | no |
| Initials | Pileal_Stipeal_center | 0.688974 | no |
| Initials | Pileal_Stipeal_shell | 0.456399 | no |
| Initials | DIF_stipe_center | 0.648699 | no |
| Initials | DIF_stipe_shell | 0.310978 | no |
| Initials | DIF_stipe_skin | 0.516827 | no |
| Initials | DIF_cap_skin | 0.629667 | no |
| Initials | DIF_cap_tissue | 0.486680 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.966600 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.811564 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.932789 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.981877 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.855596 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.549364 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.550741 | no |
| Pileal_Stipeal_center | YFB_veil | 0.819899 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.847821 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.979377 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.691363 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.889014 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.964376 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.865325 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.798783 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.585544 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.747379 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.871498 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.993555 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.327110 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.770150 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.981167 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.873805 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.892575 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.968759 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.896151 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.986120 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.946003 | no |
| DIF_stipe_center | YFB_stipe_center | 0.775760 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.909397 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.997142 | no |
| DIF_stipe_center | YFB_cap_skin | 0.881135 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.508783 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.584487 | no |
| DIF_stipe_center | YFB_veil | 0.846689 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.722695 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.914616 | no |
| DIF_stipe_center | DIF_cap_skin | 0.984826 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.891292 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.638976 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.425898 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.586294 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.726079 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.887268 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.202562 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.915888 | no |
| DIF_stipe_shell | YFB_veil | 0.914359 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.853742 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.757887 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.877517 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.847870 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.651336 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.801941 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.912425 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.975016 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.389072 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.723297 | no |
| DIF_stipe_skin | YFB_veil | 0.949823 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.933526 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.982568 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.928353 | no |
| DIF_cap_skin | YFB_stipe_center | 0.753919 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.889487 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.981962 | no |
| DIF_cap_skin | YFB_cap_skin | 0.902289 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.486185 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.615310 | no |
| DIF_cap_skin | YFB_veil | 0.870539 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.910410 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.819354 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.611910 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.770298 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.887249 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.991714 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.342831 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.750853 | no |
| DIF_cap_tissue | YFB_veil | 0.966980 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|076430 MFRSAAFRACSSLRPRSAQVARGFSTSRCIRSDAYVPTSLDTFTEEEQMLREAVRRFAVDVVGPKVREMDENEKM DPSIIKGLFEQGLMGIEIDPDHGGAGSSFTSALIVIEELAKVDPSVSVMCDVHNTLVNTIIRKHGTKEQQDKFLP LLAESTLSSFCLSEPASGSDAFALQTRAKKEGDHWILNGSKMWITNSYEADIFLIFANIDPSKGYKGITCFIATK DMGIKIAKKEQKLGIRASSTCTLNFDDLKIPAENVIGSEGKGYKIAIEVLNEGRIGIAAQMLGLAQGAFDKAVPY TYQRKQFGQPIGTFQGMQFQIAQAAIDLEAARLLTYNAARRKEEGKPFTKEAAMAKYWSSQVAQRVSGSAIEWAG GVGFTRETGIEKYWRDSKIGAIYEGTSNIQLQTIAKFIEKEYS* |
| Coding | >AgabiH97|076430 ATGTTCAGGTCTGCTGCTTTTCGCGCTTGCTCTTCTCTTCGCCCCCGGTCTGCCCAAGTAGCAAGGGGTTTCTCG ACCTCGAGATGCATACGCAGTGATGCCTACGTACCAACATCGTTGGACACTTTCACAGAAGAGGAGCAGATGCTC AGAGAGGCTGTTCGACGCTTCGCTGTCGATGTTGTCGGCCCCAAGGTCCGAGAGATGGACGAGAACGAAAAAATG GACCCATCCATCATCAAAGGTCTCTTTGAGCAAGGCCTCATGGGTATTGAAATTGATCCGGATCATGGAGGCGCT GGGTCCTCATTTACATCTGCTCTCATTGTTATCGAGGAGCTTGCCAAAGTCGACCCTTCCGTCTCGGTTATGTGT GACGTTCACAATACCCTCGTCAATACCATTATCCGCAAACATGGTACAAAAGAACAACAGGACAAGTTCTTACCC TTGCTTGCCGAGTCTACGCTTAGTTCATTCTGTCTATCAGAGCCCGCCTCTGGCTCTGACGCTTTTGCACTCCAA ACACGCGCGAAGAAAGAGGGTGATCACTGGATACTCAACGGGTCAAAGATGTGGATCACGAACTCATACGAGGCA GACATCTTCCTAATCTTTGCCAACATTGACCCTAGTAAGGGATACAAGGGAATCACCTGTTTCATTGCCACCAAG GATATGGGTATTAAGATTGCCAAAAAAGAGCAGAAGCTCGGCATTCGAGCTTCCTCGACATGTACACTAAATTTC GACGACTTGAAGATTCCTGCGGAGAACGTCATCGGTAGTGAAGGCAAAGGCTACAAAATTGCTATTGAAGTGTTG AATGAGGGCCGTATCGGTATCGCTGCCCAAATGCTTGGTCTGGCTCAAGGTGCCTTTGATAAGGCTGTTCCTTAT ACTTACCAGCGCAAGCAATTCGGTCAACCTATTGGTACCTTCCAGGGAATGCAATTCCAGATAGCGCAAGCGGCT ATCGACCTTGAGGCTGCTCGTCTGCTTACCTATAATGCTGCACGTCGCAAGGAAGAAGGCAAACCGTTTACCAAA GAAGCTGCAATGGCCAAATATTGGAGTAGTCAGGTTGCTCAGCGAGTATCTGGCTCGGCAATCGAGTGGGCGGGT GGTGTAGGGTTTACTCGAGAGACCGGCATTGAAAAGTATTGGAGGGATTCCAAAATCGGCGCCATCTACGAGGGT ACATCTAATATCCAATTGCAGACAATTGCGAAATTCATTGAAAAGGAATACTCATAA |
| Transcript | >AgabiH97|076430 ATGTTCAGGTCTGCTGCTTTTCGCGCTTGCTCTTCTCTTCGCCCCCGGTCTGCCCAAGTAGCAAGGGGTTTCTCG ACCTCGAGATGCATACGCAGTGATGCCTACGTACCAACATCGTTGGACACTTTCACAGAAGAGGAGCAGATGCTC AGAGAGGCTGTTCGACGCTTCGCTGTCGATGTTGTCGGCCCCAAGGTCCGAGAGATGGACGAGAACGAAAAAATG GACCCATCCATCATCAAAGGTCTCTTTGAGCAAGGCCTCATGGGTATTGAAATTGATCCGGATCATGGAGGCGCT GGGTCCTCATTTACATCTGCTCTCATTGTTATCGAGGAGCTTGCCAAAGTCGACCCTTCCGTCTCGGTTATGTGT GACGTTCACAATACCCTCGTCAATACCATTATCCGCAAACATGGTACAAAAGAACAACAGGACAAGTTCTTACCC TTGCTTGCCGAGTCTACGCTTAGTTCATTCTGTCTATCAGAGCCCGCCTCTGGCTCTGACGCTTTTGCACTCCAA ACACGCGCGAAGAAAGAGGGTGATCACTGGATACTCAACGGGTCAAAGATGTGGATCACGAACTCATACGAGGCA GACATCTTCCTAATCTTTGCCAACATTGACCCTAGTAAGGGATACAAGGGAATCACCTGTTTCATTGCCACCAAG GATATGGGTATTAAGATTGCCAAAAAAGAGCAGAAGCTCGGCATTCGAGCTTCCTCGACATGTACACTAAATTTC GACGACTTGAAGATTCCTGCGGAGAACGTCATCGGTAGTGAAGGCAAAGGCTACAAAATTGCTATTGAAGTGTTG AATGAGGGCCGTATCGGTATCGCTGCCCAAATGCTTGGTCTGGCTCAAGGTGCCTTTGATAAGGCTGTTCCTTAT ACTTACCAGCGCAAGCAATTCGGTCAACCTATTGGTACCTTCCAGGGAATGCAATTCCAGATAGCGCAAGCGGCT ATCGACCTTGAGGCTGCTCGTCTGCTTACCTATAATGCTGCACGTCGCAAGGAAGAAGGCAAACCGTTTACCAAA GAAGCTGCAATGGCCAAATATTGGAGTAGTCAGGTTGCTCAGCGAGTATCTGGCTCGGCAATCGAGTGGGCGGGT GGTGTAGGGTTTACTCGAGAGACCGGCATTGAAAAGTATTGGAGGGATTCCAAAATCGGCGCCATCTACGAGGGT ACATCTAATATCCAATTGCAGACAATTGCGAAATTCATTGAAAAGGAATACTCATAA |
| Gene | >AgabiH97|076430 ATGTTCAGGTCTGCTGCTTTTCGCGCTTGCTCTTCTCTTCGCCCCCGGTCTGCCCAAGTAGCAAGGTTTGTACAA GAGTATAATCCCTCTTTTGTCGCTTACAATATCTTCCTTATCAATAGGGGTTTCTCGACCTCGAGATGCATACGC AGTGATGCCTACGTACCAACATCGTTGGACACTTTCACAGAAGAGGAGCAGATGCTCAGAGAGGCTGGTATGTTT ATTCCCAATTGTCTTTGATCCGTAAGGTATTCACCTTGCGCAGTTCGACGCTTCGCTGTCGATGTTGTCGGCCCC AAGGTCCGAGAGATGGACGAGAACGAAAAAATGGACCCATCCATCATCAAAGGTCTCTTTGAGCAAGGCGTATGT CTATTCCGTGCTACAGTCGTCGAAATTTCCAACGTGTTTTTCTATCTAGCTCATGGGTATTGAAATTGATCCGGA TCATGGAGGCGCTGGGTCCTCATTTACATCTGCTCTCATTGTTATCGAGGAGCTTGCCAAAGTCGACCCTTCCGT CTCGGTTATGTGTGACGTTCACAATACCCTCGTCAATACCATTATCCGCAAACATGGTACAAAAGAACAACAGGA CAAGTTCTTACCCTTGCTTGCCGAGTCTACGGTACGTCTGACTCATAATATTGTCTTTTCTTTTTTCCCTATACC TGAAACTCTCATATCAGCTTAGTTCATTCTGTCTATCAGAGCCCGCCTCTGGCTCTGACGCTTTTGCACTCCAAA CACGCGCGAAGAAAGAGGGTGATCACTGGATACTCAACGGGTCAAAGATGTGGATCACGAACTCATACGAGGCAG ACATCTTCCTAATCTTTGCCAACGTAAGTGTACCGGTTATTTCTGCGTCGCCAGTCAGATTAATCATACTTTCTC TAAAGATTGACCCTAGTAAGGGATACAAGGGAATCACCTGTTTCATTGCCACCAAGGATATGGGTATTAAGATTG CCAAAAAAGAGCAGAAGCTCGGCATTCGAGCTTCCTCGACATGTACACTAAATTTCGACGACTTGAAGATTCCTG CGGAGAACGTCATCGGTAGTGAAGGCAAAGGCTACAAAATTGCTATTGAAGTGTTGAATGAGGGTGAGTGAAGTT ATTTCTAGTGATGTTCATTCCGTCTAACATTGTAAACACTAGGCCGTATCGGTATCGCTGCCCAAATGCTTGGTC TGGCTCAAGGTGCCTTTGATAAGGCTGTTCCTTATACTTACCAGCGCAAGCAATTCGGTCAACCTATTGGTACCT TCCAGGGAATGCAATTCCAGATAGCGCAAGCGGCTATCGACCTTGAGGCTGCTCGTCTGCTTACCTATAATGCTG CACGTCGCAAGGAAGAAGGCAAACCGTTTACCAAAGAAGCTGCAATGGCCAAATATTGGAGTAGTCAGGTTGCTC AGCGAGTATCTGGCTCGGCAATCGAGTGGGCGGGTGGTGTAGGGTTTACTCGAGAGACCGGCATTGAAAAGTATT GGAGGGATTCCAAAATCGTAAGCTTTCTCCATACCATATCTGCGAGGTATCGACTGACAGTGTTTCAGGGCGCCA TCTACGAGGGTACATCTAATATCCAATTGCAGACAATTGCGAAATTCATTGAAAAGGAATACTCATAA |