Protein ID | AgabiH97|076000 |
Gene name | |
Location | scaffold_4:2492366..2495348 |
Strand | - |
Gene length (bp) | 2982 |
Transcript length (bp) | 2832 |
Coding sequence length (bp) | 2832 |
Protein length (aa) | 944 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02992 | Transposase_21 | Transposase family tnp2 | 7.2E-25 | 373 | 501 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.2925 | 0.8097 | 0.4181 | 0.0219 | 0.1255 | 0.0134 | 0.1036 | 0.1077 | 0.0492 | 0.0495 |
Orthofinder run ID | 1 |
Orthogroup | 120 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|076000 MESNSANTTTKRKSACICVCGCNREVSYPTRRAHVAAKRALDETSEDQRVNKRQRSKSPTDQSEEWQEDGRFGAA SPEPPQIEDTDFLYQDPPSSLSPRAIRVAEKTRQIITNRWRDPPSQPTPDVQEDACDDDYENEEEDLEWIRGEDG NSVHASDNISDDERESESEDEEDEDKDGVGDLTVGLSRTDIPSLSFWDRLSDDLAHRLMTSDRSLDESDVSLLRQ YALKVEDHLTESTFAKFKFAFPESYYHSLKKTKRRVELLSNIQTIQYSCCVNSCVCFTGPYADLTECPNCKVVWL NDQKKPRKFFDYIPLIPRLQAMSANRQFAEKMCYRANFEHQHRVATDVFDGSHYQSLLNKIVPSSNNDHPFFFFS DSRDVALGLSTDGFAPFKRCDKTCWPIILFNYNLPPDIRFQRKYCINVGTVPGPKKPWDMDSFLWPLVQELIQLE VGVRCFDAISQTLFLLHAYLIMVFGDIPAVALLMRMKGANGISLCRVCKITGVCGNTSNMYYVPLQRSQIPESDP PSYNLSQLPIREHDELMAQAKEVQDAPNQATSNRLAKQYGIKGVPILSSLSSISFPESFPFDFMHLIWENLIPNL ILFWTASFKDLDHENQGYVLPPAVWRAIGANTATCKASIPSAFGAPIPNIALQQSQMTSEMYSNWTLFVAPILLY NKFPQRKYYQHFMKLVQLLKMCMEFEISEEMLDVIEGGFRAWVEDYKKFYYFHQTRRLSACPLTIHALLHIAWGI RVAGPVWTYWAFPMERHCNTLLPSIRSRRHPYAAITTFVTAMAQLDQVRLNYNLHSELSLSGMKRTLSIKDLICD SYSSYKLSPPRRTELIPTHLRDKVYAALATRFEKAKATIKTLLNLDEPVIQYDRVTCLGGGDIMSGCDLVHKSED SRDASFIKASPFDLWCYCHTKLTISMSKWLINTPINQTASRST* |
Coding | >AgabiH97|076000 ATGGAGTCCAACTCGGCCAATACTACTACGAAAAGGAAGTCAGCCTGCATATGTGTGTGCGGCTGTAACAGAGAA GTTTCCTACCCAACAAGACGAGCACACGTGGCTGCAAAGAGGGCCTTAGACGAGACTTCCGAGGATCAACGTGTC AACAAGCGGCAGCGTTCAAAATCGCCTACAGACCAGAGTGAGGAATGGCAAGAGGACGGGAGGTTCGGTGCCGCC AGTCCTGAGCCGCCTCAAATTGAAGACACCGATTTCCTATATCAAGACCCTCCTAGCAGTCTCTCACCCCGGGCC ATTCGTGTCGCAGAGAAAACCAGGCAGATAATTACAAACCGTTGGAGGGATCCTCCTTCTCAGCCAACACCCGAT GTTCAAGAGGATGCATGTGATGATGATTATGAAAACGAGGAAGAAGATTTGGAATGGATCCGGGGAGAAGACGGT AACAGCGTGCATGCCAGCGACAATATTTCTGATGATGAAAGAGAAAGCGAGAGTGAGGATGAAGAAGACGAGGAC AAGGATGGAGTAGGCGACCTTACCGTTGGTCTGTCCAGAACAGACATACCCTCGCTGTCTTTCTGGGATCGCCTT AGCGATGATTTAGCGCACAGGCTGATGACAAGTGATAGGTCATTGGATGAATCTGACGTAAGCTTGCTCCGTCAG TATGCCTTGAAGGTTGAAGACCACCTTACCGAGAGTACCTTTGCCAAGTTCAAATTTGCTTTTCCGGAGTCTTAC TATCATTCGCTCAAGAAGACAAAAAGGCGTGTCGAGCTTCTGTCAAATATCCAAACGATACAATACAGCTGTTGC GTGAACAGCTGTGTCTGTTTTACTGGACCCTACGCAGACCTCACGGAATGTCCAAACTGCAAGGTGGTATGGCTC AACGATCAAAAGAAACCGCGTAAATTCTTTGACTATATCCCCCTGATTCCTCGCTTACAAGCAATGTCTGCCAAT CGTCAATTTGCCGAAAAAATGTGTTACCGAGCCAATTTTGAACATCAGCACAGAGTAGCGACAGATGTTTTCGAC GGGTCTCACTACCAGTCATTACTGAACAAGATTGTCCCGTCCAGTAACAATGATCACCCTTTTTTCTTCTTCTCA GACTCCCGTGATGTCGCGCTCGGTCTTTCTACCGATGGCTTTGCGCCATTCAAACGATGTGATAAGACGTGCTGG CCAATAATCCTTTTCAACTACAATCTCCCGCCCGACATACGATTTCAAAGGAAATACTGTATCAACGTTGGAACT GTCCCAGGGCCCAAAAAGCCCTGGGATATGGACTCTTTTCTTTGGCCCCTTGTTCAGGAACTCATTCAACTCGAA GTTGGAGTTCGATGTTTTGACGCCATCAGCCAAACCCTTTTTTTACTCCATGCATACCTCATTATGGTCTTTGGA GATATCCCTGCAGTAGCGCTCCTCATGCGCATGAAAGGCGCCAATGGAATTAGCCTGTGTCGAGTGTGTAAAATA ACGGGTGTTTGTGGCAATACTTCCAACATGTATTATGTTCCTTTGCAACGGAGTCAGATTCCAGAGTCTGACCCT CCATCATACAACCTGTCGCAACTTCCTATCCGAGAGCATGATGAATTAATGGCTCAAGCGAAGGAGGTACAAGAT GCACCCAATCAAGCGACGTCCAATCGGCTTGCCAAGCAATATGGCATCAAAGGCGTGCCCATCCTCAGTTCCTTA TCCTCAATATCTTTTCCCGAATCATTTCCGTTCGATTTCATGCATCTCATCTGGGAAAACCTCATTCCCAATCTC ATCTTATTCTGGACCGCGTCTTTCAAAGATCTTGACCATGAAAATCAAGGTTATGTTTTACCACCTGCGGTCTGG AGAGCAATCGGAGCGAATACGGCCACCTGTAAAGCGTCTATACCGTCTGCTTTCGGAGCACCCATTCCCAATATT GCTTTACAGCAATCGCAAATGACATCGGAGATGTATTCAAATTGGACGCTTTTTGTGGCGCCAATCTTATTGTAT AACAAGTTTCCACAAAGAAAGTATTATCAACACTTCATGAAGCTCGTCCAGCTGCTGAAAATGTGTATGGAGTTT GAGATTAGCGAAGAGATGTTGGATGTAATAGAAGGCGGCTTCCGTGCTTGGGTAGAGGACTACAAGAAGTTCTAT TATTTCCATCAAACCCGCCGGCTCTCTGCATGCCCTTTAACGATACATGCACTCCTTCATATTGCGTGGGGCATT CGGGTCGCCGGTCCAGTTTGGACTTACTGGGCCTTCCCAATGGAACGGCACTGTAACACGCTTTTGCCCTCCATT AGAAGCCGACGACACCCCTATGCTGCTATCACTACCTTCGTCACTGCAATGGCACAGCTTGATCAAGTGCGACTC AACTACAACCTACACTCGGAGTTGAGTTTAAGTGGCATGAAAAGAACGTTATCAATAAAGGATTTGATATGCGAC TCGTATTCATCCTACAAGCTCTCCCCGCCACGACGGACCGAACTTATACCCACACACCTCCGTGACAAAGTTTAT GCAGCATTAGCGACACGATTCGAAAAAGCAAAAGCTACAATCAAAACACTCCTAAATCTTGACGAACCTGTTATA CAGTACGATAGGGTTACCTGTCTGGGTGGGGGTGATATTATGTCAGGTTGTGACCTAGTCCACAAAAGTGAGGAC TCGCGGGATGCCTCCTTCATCAAGGCGAGTCCTTTTGACCTTTGGTGTTATTGTCATACCAAATTGACTATAAGT ATGTCCAAATGGTTGATAAACACGCCCATCAACCAAACCGCGAGCCGGTCTACATGA |
Transcript | >AgabiH97|076000 ATGGAGTCCAACTCGGCCAATACTACTACGAAAAGGAAGTCAGCCTGCATATGTGTGTGCGGCTGTAACAGAGAA GTTTCCTACCCAACAAGACGAGCACACGTGGCTGCAAAGAGGGCCTTAGACGAGACTTCCGAGGATCAACGTGTC AACAAGCGGCAGCGTTCAAAATCGCCTACAGACCAGAGTGAGGAATGGCAAGAGGACGGGAGGTTCGGTGCCGCC AGTCCTGAGCCGCCTCAAATTGAAGACACCGATTTCCTATATCAAGACCCTCCTAGCAGTCTCTCACCCCGGGCC ATTCGTGTCGCAGAGAAAACCAGGCAGATAATTACAAACCGTTGGAGGGATCCTCCTTCTCAGCCAACACCCGAT GTTCAAGAGGATGCATGTGATGATGATTATGAAAACGAGGAAGAAGATTTGGAATGGATCCGGGGAGAAGACGGT AACAGCGTGCATGCCAGCGACAATATTTCTGATGATGAAAGAGAAAGCGAGAGTGAGGATGAAGAAGACGAGGAC AAGGATGGAGTAGGCGACCTTACCGTTGGTCTGTCCAGAACAGACATACCCTCGCTGTCTTTCTGGGATCGCCTT AGCGATGATTTAGCGCACAGGCTGATGACAAGTGATAGGTCATTGGATGAATCTGACGTAAGCTTGCTCCGTCAG TATGCCTTGAAGGTTGAAGACCACCTTACCGAGAGTACCTTTGCCAAGTTCAAATTTGCTTTTCCGGAGTCTTAC TATCATTCGCTCAAGAAGACAAAAAGGCGTGTCGAGCTTCTGTCAAATATCCAAACGATACAATACAGCTGTTGC GTGAACAGCTGTGTCTGTTTTACTGGACCCTACGCAGACCTCACGGAATGTCCAAACTGCAAGGTGGTATGGCTC AACGATCAAAAGAAACCGCGTAAATTCTTTGACTATATCCCCCTGATTCCTCGCTTACAAGCAATGTCTGCCAAT CGTCAATTTGCCGAAAAAATGTGTTACCGAGCCAATTTTGAACATCAGCACAGAGTAGCGACAGATGTTTTCGAC GGGTCTCACTACCAGTCATTACTGAACAAGATTGTCCCGTCCAGTAACAATGATCACCCTTTTTTCTTCTTCTCA GACTCCCGTGATGTCGCGCTCGGTCTTTCTACCGATGGCTTTGCGCCATTCAAACGATGTGATAAGACGTGCTGG CCAATAATCCTTTTCAACTACAATCTCCCGCCCGACATACGATTTCAAAGGAAATACTGTATCAACGTTGGAACT GTCCCAGGGCCCAAAAAGCCCTGGGATATGGACTCTTTTCTTTGGCCCCTTGTTCAGGAACTCATTCAACTCGAA GTTGGAGTTCGATGTTTTGACGCCATCAGCCAAACCCTTTTTTTACTCCATGCATACCTCATTATGGTCTTTGGA GATATCCCTGCAGTAGCGCTCCTCATGCGCATGAAAGGCGCCAATGGAATTAGCCTGTGTCGAGTGTGTAAAATA ACGGGTGTTTGTGGCAATACTTCCAACATGTATTATGTTCCTTTGCAACGGAGTCAGATTCCAGAGTCTGACCCT CCATCATACAACCTGTCGCAACTTCCTATCCGAGAGCATGATGAATTAATGGCTCAAGCGAAGGAGGTACAAGAT GCACCCAATCAAGCGACGTCCAATCGGCTTGCCAAGCAATATGGCATCAAAGGCGTGCCCATCCTCAGTTCCTTA TCCTCAATATCTTTTCCCGAATCATTTCCGTTCGATTTCATGCATCTCATCTGGGAAAACCTCATTCCCAATCTC ATCTTATTCTGGACCGCGTCTTTCAAAGATCTTGACCATGAAAATCAAGGTTATGTTTTACCACCTGCGGTCTGG AGAGCAATCGGAGCGAATACGGCCACCTGTAAAGCGTCTATACCGTCTGCTTTCGGAGCACCCATTCCCAATATT GCTTTACAGCAATCGCAAATGACATCGGAGATGTATTCAAATTGGACGCTTTTTGTGGCGCCAATCTTATTGTAT AACAAGTTTCCACAAAGAAAGTATTATCAACACTTCATGAAGCTCGTCCAGCTGCTGAAAATGTGTATGGAGTTT GAGATTAGCGAAGAGATGTTGGATGTAATAGAAGGCGGCTTCCGTGCTTGGGTAGAGGACTACAAGAAGTTCTAT TATTTCCATCAAACCCGCCGGCTCTCTGCATGCCCTTTAACGATACATGCACTCCTTCATATTGCGTGGGGCATT CGGGTCGCCGGTCCAGTTTGGACTTACTGGGCCTTCCCAATGGAACGGCACTGTAACACGCTTTTGCCCTCCATT AGAAGCCGACGACACCCCTATGCTGCTATCACTACCTTCGTCACTGCAATGGCACAGCTTGATCAAGTGCGACTC AACTACAACCTACACTCGGAGTTGAGTTTAAGTGGCATGAAAAGAACGTTATCAATAAAGGATTTGATATGCGAC TCGTATTCATCCTACAAGCTCTCCCCGCCACGACGGACCGAACTTATACCCACACACCTCCGTGACAAAGTTTAT GCAGCATTAGCGACACGATTCGAAAAAGCAAAAGCTACAATCAAAACACTCCTAAATCTTGACGAACCTGTTATA CAGTACGATAGGGTTACCTGTCTGGGTGGGGGTGATATTATGTCAGGTTGTGACCTAGTCCACAAAAGTGAGGAC TCGCGGGATGCCTCCTTCATCAAGGCGAGTCCTTTTGACCTTTGGTGTTATTGTCATACCAAATTGACTATAAGT ATGTCCAAATGGTTGATAAACACGCCCATCAACCAAACCGCGAGCCGGTCTACATGA |
Gene | >AgabiH97|076000 ATGGAGTCCAACTCGGCCAATACTACTACGAAAAGGAAGTCAGCCTGCATATGTGTGTGCGGCTGTAACAGAGAA GTTTCCTACCCAACAAGACGAGCACACGTGGCTGCAAAGAGGGCCTTAGACGAGACTTCCGAGGATCAACGTGTC AACAAGCGGCAGCGTTCAAAATCGCCTACAGACCAGAGTGAGGAATGGCAAGAGGACGGGAGGTTCGGTGCCGCC AGTCCTGAGCCGCCTCAAATTGAAGACACCGATTTCCTATATCAAGACCCTCCTAGCAGTCTCTCACCCCGGGCC ATTCGTGTCGCAGAGAAAACCAGGCAGATAATTACAAACCGTTGGAGGGATCCTCCTTCTCAGCCAACACCCGAT GTTCAAGAGGATGCATGTGATGATGATTATGAAAACGAGGAAGAAGATTTGGAATGGATCCGGGGAGAAGACGGT AACAGCGTGCATGCCAGCGACAATATTTCTGATGATGAAAGAGAAAGCGAGAGTGAGGATGAAGAAGACGAGGAC AAGGATGGAGTAGGCGACCTTACCGTTGGTCTGTCCAGAACAGACATACCCTCGCTGTCTTTCTGGGATCGCCTT AGCGATGATTTAGCGCACAGGCTGATGACAAGTGGTTTGTGTGTCACCATAATTCTTACTCTTTTGCTGATTATT GTCACAGATAGGTCATTGGATGAATCTGACGTAAGCTTGCTCCGTCAGTATGCCTTGAAGGTTGAAGACCACCTT ACCGAGAGTACCTTTGCCAAGTTCAAATTTGCTTTTCCGGAGTCTTACTATCATTCGCTCAAGAAGACAAAAAGG CGTGTCGAGCTTCTGTCAAATATCCAAACGATACAATACAGCTGTTGCGTGAACAGCTGTGTCTGTTTTACTGGA CCCTACGCAGACCTCACGGAATGTCCAAACTGCAAGGTGGTATGGCTCAACGATCAAAAGAAACCGCGTAAATTC TTTGACTATATCCCCCTGATTCCTCGCTTACAAGCAATGTCTGCCAATCGTCAATTTGCCGAAAAAATGTGTTAC CGAGCCAATTTTGAACATCAGCACAGAGTAGCGACAGATGTTTTCGACGGGTCTCACTACCAGTCATTACTGAAC AAGATTGTCCCGTCCAGTAACAATGATCACCCTTTTTTCTTCTTCTCAGACTCCCGTGATGTCGCGCTCGGTCTT TCTACCGATGGCTTTGCGCCATTCAAACGATGTGATAAGACGTGCTGGCCAATAATCCTTTTCAACTACAATCTC CCGCCCGACATACGATTTCAAAGGAAATACTGTATCAACGTTGGAACTGTCCCAGGGCCCAAAAAGCCCTGGGAT ATGGACTCTTTTCTTTGGCCCCTTGTTCAGGAACTCATTCAACTCGAAGTTGGAGTTCGATGTTTTGACGCCATC AGCCAAACCCTTTTTTTACTCCATGCATACCTCATTATGGTCTTTGGAGATATCCCTGCAGTAGCGCTCCTCATG CGCATGAAAGGCGCCAATGGAATTAGCCTGTGTCGAGTGTGTAAAATAACGGGTGTTTGTGGCAATACTTCCAAC ATGTATTATGTTCCTTTGCAACGGAGTCAGATTCCAGAGTCTGACCCTCCATCATACAACCTGTCGCAACTTCCT ATCCGAGAGCATGATGAATTAATGGCTCAAGCGAAGGAGGTACAAGATGCACCCAATCAAGCGACGTCCAATCGG CTTGCCAAGCAATATGGCATCAAAGGCGTGCCCATCCTCAGTTCCTTATCCTCAATATCTTTTCCCGAATCATTT CCGTTCGATTTCATGCATCTCATCTGGGAAAACCTCATTCCCAATCTCATCTTATTCTGGACCGCGTCTTTCAAA GATCTTGACCATGAAAATCAAGGTTATGTTTTACCACCTGCGGTCTGGAGAGCAATCGGAGCGAATACGGCCACC TGTAAAGCGTCTATACCGTCTGCTTTCGGAGCACCCATTCCCAATATTGCTTTACAGCAATCGCAAATGACATCG GAGATGTATTCAAATTGGACGCTTTTTGTGGCGCCAATCTTATTGTATAACAAGTTTCCACAAAGAAAGTATTAT CAACACTTCATGAAGCTCGTCCAGCTGCTGAAAATGTGTATGGAGTTTGAGATTAGCGAAGAGATGTTGGATGTA ATAGAAGGCGGCTTCCGTGCTTGGGTAGAGGACTACAAGAAGTGAGTTGAGTTTCATATGCTTATAATCAAATCT GCCTTAACCTGCCTAGGTTCTATTATTTCCATCAAACCCGCCGGCTCTCTGCATGCCCTTTAACGATACATGCAC TCCTTCATATTGCGTGGGGCATTCGGGTCGCCGGTCCAGTTTGGACTTACTGGGCCTTCCCAATGGAACGGCACT GTAACACGCTTTTGCCCTCCATTAGAAGCCGACGACACCCCTATGCTGCTATCACTACCTTCGTCACTGCAATGG CACAGCTTGATCAAGTGCGACTCAACTACAACCTACACTCGGAGTTGAGTTTAAGTGGCATGAAAAGAACGTTAT CAATAAAGGATTTGATATGCGACTCGTGTACGTTGTCATCCCCTCTCCTTGATATATGGATTCAATTCAATTATT CCAGATTCATCCTACAAGCTCTCCCCGCCACGACGGACCGAACTTATACCCACACACCTCCGTGACAAAGTTTAT GCAGCATTAGCGACACGATTCGAAAAAGCAAAAGCTACAATCAAAACACTCCTAAATCTTGACGAACCTGTTATA CAGTACGATAGGGTTACCTGTCTGGGTGGGGGTGATATTATGTCAGGTTGTGACCTAGTCCACAAAAGTGAGGAC TCGCGGGATGCCTCCTTCATCAAGGCGAGTCCTTTTGACCTTTGGTGTTATTGTCATACCAAATTGACTATAAGT ATGTCCAAATGGTTGATAAACACGCCCATCAACCAAACCGCGAGCCGGTCTACATGA |