Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|075080
Gene name
Locationscaffold_4:2291788..2293109
Strand+
Gene length (bp)1321
Transcript length (bp)1014
Coding sequence length (bp)1014
Protein length (aa) 338

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15906 zf-NOSIP Zinc-finger of nitric oxide synthase-interacting protein 9.2E-12 4 74
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 5.9E-07 259 303
PF13445 zf-RING_UBOX RING-type zinc-finger 1.2E-03 260 288

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6P829|NOSIP_XENTR Nitric oxide synthase-interacting protein OS=Xenopus tropicalis GN=nosip PE=2 SV=1 1 325 1.0E-31
sp|Q6NUH3|NOSIP_XENLA Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1 1 325 3.0E-31
sp|Q5U3S7|NOSIP_DANRE Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip PE=2 SV=1 1 325 4.0E-31
sp|Q9D6T0|NOSIP_MOUSE Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip PE=1 SV=1 1 330 9.0E-31
sp|Q3SWY5|NOSIP_BOVIN Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP PE=2 SV=1 1 330 2.0E-30
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6P829|NOSIP_XENTR Nitric oxide synthase-interacting protein OS=Xenopus tropicalis GN=nosip PE=2 SV=1 1 325 1.0E-31
sp|Q6NUH3|NOSIP_XENLA Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1 1 325 3.0E-31
sp|Q5U3S7|NOSIP_DANRE Nitric oxide synthase-interacting protein OS=Danio rerio GN=nosip PE=2 SV=1 1 325 4.0E-31
sp|Q9D6T0|NOSIP_MOUSE Nitric oxide synthase-interacting protein OS=Mus musculus GN=Nosip PE=1 SV=1 1 330 9.0E-31
sp|Q3SWY5|NOSIP_BOVIN Nitric oxide synthase-interacting protein OS=Bos taurus GN=NOSIP PE=2 SV=1 1 330 2.0E-30
sp|Q9Y314|NOSIP_HUMAN Nitric oxide synthase-interacting protein OS=Homo sapiens GN=NOSIP PE=1 SV=1 1 330 2.0E-29
sp|Q4R7H4|NOSIP_MACFA Nitric oxide synthase-interacting protein OS=Macaca fascicularis GN=NOSIP PE=2 SV=1 1 330 2.0E-29
sp|Q21755|NOSIP_CAEEL Nitric oxide synthase-interacting protein homolog OS=Caenorhabditis elegans GN=R05G6.4 PE=3 SV=1 1 322 4.0E-26
sp|Q9VWV8|NOSIP_DROME Nitric oxide synthase-interacting protein homolog OS=Drosophila melanogaster GN=CG6179 PE=3 SV=1 1 321 5.0E-26
sp|Q55DU4|NOSIP_DICDI Nitric oxide synthase-interacting protein homolog OS=Dictyostelium discoideum GN=nosip PE=2 SV=1 1 117 3.0E-16
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
Casing Casing mycelium 60.50 35.86 85.13
Initials Initials knots 67.69 40.41 94.98
Pileal_Stipeal_center Stage I stipe center 75.59 44.93 106.25
Pileal_Stipeal_shell Stage I stipe shell 92.40 55.34 129.46
DIF_stipe_center Stage II stipe center 80.62 48.54 112.70
DIF_stipe_shell Stage II stipe shell 68.06 40.61 95.50
DIF_stipe_skin Stage II stipe skin 72.74 43.58 101.89
DIF_cap_skin Stage II cap skin 92.29 55.60 128.97
DIF_cap_tissue Stage II cap tissue 90.63 54.76 126.49
DIF_gill_tissue Stage II gill tissue 94.93 57.24 132.62
YFB_stipe_center Young fruiting body stipe center 83.75 49.23 118.27
YFB_stipe_shell Young fruiting body stipe shell 77.42 46.07 108.78
YFB_stipe_skin Young fruiting body stipe skin 72.60 43.47 101.74
YFB_cap_skin Young fruiting body cap skin 79.66 48.03 111.29
YFB_cap_tissue Young fruiting body cap tissue 71.44 42.84 100.04
YFB_gill_tissue Young fruiting body gill tissue 95.30 57.67 132.92
YFB_veil Young fruiting body veil 92.88 56.15 129.61

Differential expression

Label1 Label2 Q-value Significant difference
Casing DIF_gill_tissue 0.100566 no
Casing YFB_stipe_center 0.296014 no
Casing YFB_stipe_shell 0.477294 no
Casing YFB_stipe_skin 0.637286 no
Casing YFB_cap_skin 0.397222 no
Casing YFB_cap_tissue 0.677217 no
Casing YFB_gill_tissue 0.099595 no
Casing YFB_veil 0.123655 no
Casing Initials 0.804398 no
Casing Pileal_Stipeal_center 0.531725 no
Casing Pileal_Stipeal_shell 0.131406 no
Casing DIF_stipe_center 0.372574 no
Casing DIF_stipe_shell 0.792120 no
Casing DIF_stipe_skin 0.632388 no
Casing DIF_cap_skin 0.132420 no
Casing DIF_cap_tissue 0.157833 no
DIF_gill_tissue YFB_stipe_center 0.770580 no
DIF_gill_tissue YFB_stipe_shell 0.577646 no
DIF_gill_tissue YFB_stipe_skin 0.413939 no
DIF_gill_tissue YFB_cap_skin 0.641721 no
DIF_gill_tissue YFB_cap_tissue 0.371897 no
DIF_gill_tissue YFB_gill_tissue 0.993452 no
DIF_gill_tissue YFB_veil 0.968440 no
YFB_stipe_center YFB_stipe_shell 0.873104 no
YFB_stipe_center YFB_stipe_skin 0.734866 no
YFB_stipe_center YFB_cap_skin 0.923335 no
YFB_stipe_center YFB_cap_tissue 0.697394 no
YFB_stipe_center YFB_gill_tissue 0.764070 no
YFB_stipe_center YFB_veil 0.822511 no
YFB_stipe_shell YFB_stipe_skin 0.898323 no
YFB_stipe_shell YFB_cap_skin 0.957304 no
YFB_stipe_shell YFB_cap_tissue 0.870416 no
YFB_stipe_shell YFB_gill_tissue 0.567553 no
YFB_stipe_shell YFB_veil 0.634621 no
YFB_stipe_skin YFB_cap_skin 0.840271 no
YFB_stipe_skin YFB_cap_tissue 0.978015 no
YFB_stipe_skin YFB_gill_tissue 0.412295 no
YFB_stipe_skin YFB_veil 0.474750 no
YFB_cap_skin YFB_cap_tissue 0.812524 no
YFB_cap_skin YFB_gill_tissue 0.635679 no
YFB_cap_skin YFB_veil 0.704579 no
YFB_cap_tissue YFB_gill_tissue 0.373006 no
YFB_cap_tissue YFB_veil 0.430543 no
YFB_gill_tissue YFB_veil 0.963286 no
Initials DIF_gill_tissue 0.267567 no
Initials YFB_stipe_center 0.561775 no
Initials YFB_stipe_shell 0.757257 no
Initials YFB_stipe_skin 0.889855 no
Initials YFB_cap_skin 0.683033 no
Initials YFB_cap_tissue 0.918427 no
Initials YFB_gill_tissue 0.265645 no
Initials YFB_veil 0.314873 no
Initials Pileal_Stipeal_center 0.806968 no
Initials Pileal_Stipeal_shell 0.323160 no
Initials DIF_stipe_center 0.656840 no
Initials DIF_stipe_shell 0.991849 no
Initials DIF_stipe_skin 0.887206 no
Initials DIF_cap_skin 0.327925 no
Initials DIF_cap_tissue 0.371484 no
Pileal_Stipeal_center DIF_gill_tissue 0.515361 no
Pileal_Stipeal_center YFB_stipe_center 0.823069 no
Pileal_Stipeal_center YFB_stipe_shell 0.965027 no
Pileal_Stipeal_center YFB_stipe_skin 0.940545 no
Pileal_Stipeal_center YFB_cap_skin 0.918352 no
Pileal_Stipeal_center YFB_cap_tissue 0.913475 no
Pileal_Stipeal_center YFB_gill_tissue 0.507902 no
Pileal_Stipeal_center YFB_veil 0.572540 no
Pileal_Stipeal_center Pileal_Stipeal_shell 0.584390 no
Pileal_Stipeal_center DIF_stipe_center 0.897270 no
Pileal_Stipeal_center DIF_stipe_shell 0.818492 no
Pileal_Stipeal_center DIF_stipe_skin 0.943031 no
Pileal_Stipeal_center DIF_cap_skin 0.586018 no
Pileal_Stipeal_center DIF_cap_tissue 0.632672 no
Pileal_Stipeal_shell DIF_gill_tissue 0.962365 no
Pileal_Stipeal_shell YFB_stipe_center 0.831933 no
Pileal_Stipeal_shell YFB_stipe_shell 0.648401 no
Pileal_Stipeal_shell YFB_stipe_skin 0.486051 no
Pileal_Stipeal_shell YFB_cap_skin 0.714742 no
Pileal_Stipeal_shell YFB_cap_tissue 0.444926 no
Pileal_Stipeal_shell YFB_gill_tissue 0.956200 no
Pileal_Stipeal_shell YFB_veil 0.991849 no
Pileal_Stipeal_shell DIF_stipe_center 0.747719 no
Pileal_Stipeal_shell DIF_stipe_shell 0.339037 no
Pileal_Stipeal_shell DIF_stipe_skin 0.484931 no
Pileal_Stipeal_shell DIF_cap_skin 0.997502 no
Pileal_Stipeal_shell DIF_cap_tissue 0.971511 no
DIF_stipe_center DIF_gill_tissue 0.673936 no
DIF_stipe_center YFB_stipe_center 0.942888 no
DIF_stipe_center YFB_stipe_shell 0.938811 no
DIF_stipe_center YFB_stipe_skin 0.815411 no
DIF_stipe_center YFB_cap_skin 0.982486 no
DIF_stipe_center YFB_cap_tissue 0.781981 no
DIF_stipe_center YFB_gill_tissue 0.667616 no
DIF_stipe_center YFB_veil 0.733169 no
DIF_stipe_center DIF_stipe_shell 0.669592 no
DIF_stipe_center DIF_stipe_skin 0.822248 no
DIF_stipe_center DIF_cap_skin 0.744528 no
DIF_stipe_center DIF_cap_tissue 0.783452 no
DIF_stipe_shell DIF_gill_tissue 0.275250 no
DIF_stipe_shell YFB_stipe_center 0.574237 no
DIF_stipe_shell YFB_stipe_shell 0.770939 no
DIF_stipe_shell YFB_stipe_skin 0.898874 no
DIF_stipe_shell YFB_cap_skin 0.698274 no
DIF_stipe_shell YFB_cap_tissue 0.928498 no
DIF_stipe_shell YFB_gill_tissue 0.272239 no
DIF_stipe_shell YFB_veil 0.324781 no
DIF_stipe_shell DIF_stipe_skin 0.896068 no
DIF_stipe_shell DIF_cap_skin 0.341494 no
DIF_stipe_shell DIF_cap_tissue 0.381332 no
DIF_stipe_skin DIF_gill_tissue 0.420349 no
DIF_stipe_skin YFB_stipe_center 0.736051 no
DIF_stipe_skin YFB_stipe_shell 0.903475 no
DIF_stipe_skin YFB_stipe_skin 0.997074 no
DIF_stipe_skin YFB_cap_skin 0.846327 no
DIF_stipe_skin YFB_cap_tissue 0.974692 no
DIF_stipe_skin YFB_gill_tissue 0.415523 no
DIF_stipe_skin YFB_veil 0.477715 no
DIF_stipe_skin DIF_cap_skin 0.490893 no
DIF_stipe_skin DIF_cap_tissue 0.534722 no
DIF_cap_skin DIF_gill_tissue 0.959217 no
DIF_cap_skin YFB_stipe_center 0.834344 no
DIF_cap_skin YFB_stipe_shell 0.651533 no
DIF_cap_skin YFB_stipe_skin 0.487508 no
DIF_cap_skin YFB_cap_skin 0.716087 no
DIF_cap_skin YFB_cap_tissue 0.447555 no
DIF_cap_skin YFB_gill_tissue 0.953366 no
DIF_cap_skin YFB_veil 0.990332 no
DIF_cap_skin DIF_cap_tissue 0.972836 no
DIF_cap_tissue DIF_gill_tissue 0.930230 no
DIF_cap_tissue YFB_stipe_center 0.870539 no
DIF_cap_tissue YFB_stipe_shell 0.694495 no
DIF_cap_tissue YFB_stipe_skin 0.530839 no
DIF_cap_tissue YFB_cap_skin 0.757367 no
DIF_cap_tissue YFB_cap_tissue 0.492203 no
DIF_cap_tissue YFB_gill_tissue 0.923922 no
DIF_cap_tissue YFB_veil 0.965330 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|075080
MTKHSKNNTASSIFSYAERKKTEYGTQKQRLGNESMRQFDACTLCLNRARETLACEEGHLFCKECIYTDLLTQKK
DIKRQKEKLDAWKREHEEEKIRVREAARERVLADFEKSHLGLAARSTEIGRTGRTSTEHGRGTKRKFEFDASAVE
TLQREAEETAMRKIEKEQAEALKSKLPDFWLPSLTPTYTSNGLPTSLRQVKVQTMCRGGTPAHPVSLKSLFPIKF
TFFDGSSQQPGSNGSPSDSGTVKTTSRKDELDPICPACKKQLSNNVLISAAKPCGHVTCKSCTDSLIRTSKQCIV
CDELLKEKDILELKREGTGFAGGGIAEASRTGVSFQG*
Coding >AgabiH97|075080
ATGACGAAACATAGCAAGAATAACACCGCCTCGTCCATTTTCAGCTATGCAGAACGCAAGAAAACAGAATATGGC
ACTCAAAAGCAACGCCTTGGAAATGAGTCAATGCGTCAATTTGATGCCTGTACGCTGTGCTTAAATCGCGCCCGG
GAAACTCTGGCATGTGAAGAAGGGCATTTGTTTTGTAAAGAGTGTATTTATACAGATCTTTTGACGCAGAAAAAG
GATATTAAGCGCCAGAAAGAAAAATTGGATGCGTGGAAACGGGAACACGAGGAAGAGAAAATCAGGGTCCGAGAG
GCCGCTCGAGAACGGGTGTTAGCAGATTTTGAGAAAAGTCACCTCGGCTTAGCAGCTCGATCCACTGAAATTGGA
AGGACAGGCAGGACCTCAACGGAACATGGTAGGGGCACAAAGCGCAAGTTTGAGTTTGACGCTTCAGCGGTCGAG
ACTCTACAGCGGGAAGCCGAAGAGACAGCTATGCGTAAAATAGAAAAGGAACAAGCCGAAGCATTGAAGAGCAAA
CTTCCAGATTTCTGGCTACCGTCTTTGACGCCGACCTACACCTCAAACGGACTTCCAACTTCTCTTCGGCAAGTC
AAGGTTCAGACGATGTGTCGAGGCGGGACTCCAGCCCATCCCGTATCCTTGAAGTCCTTGTTTCCAATCAAATTT
ACTTTTTTCGACGGTTCGTCTCAACAGCCTGGATCCAACGGTTCTCCATCAGATTCTGGAACTGTCAAGACAACT
TCTAGAAAGGATGAGTTGGATCCTATATGTCCGGCTTGTAAGAAGCAACTATCAAACAACGTACTTATCTCTGCG
GCGAAACCATGTGGACACGTCACTTGTAAAAGCTGTACAGATTCTCTTATTCGGACATCAAAACAGTGTATAGTT
TGTGACGAGCTGTTGAAGGAGAAAGACATACTCGAACTGAAGCGTGAAGGTACTGGATTCGCTGGTGGGGGAATC
GCTGAGGCTTCCAGGACAGGAGTGTCGTTCCAAGGATAA
Transcript >AgabiH97|075080
ATGACGAAACATAGCAAGAATAACACCGCCTCGTCCATTTTCAGCTATGCAGAACGCAAGAAAACAGAATATGGC
ACTCAAAAGCAACGCCTTGGAAATGAGTCAATGCGTCAATTTGATGCCTGTACGCTGTGCTTAAATCGCGCCCGG
GAAACTCTGGCATGTGAAGAAGGGCATTTGTTTTGTAAAGAGTGTATTTATACAGATCTTTTGACGCAGAAAAAG
GATATTAAGCGCCAGAAAGAAAAATTGGATGCGTGGAAACGGGAACACGAGGAAGAGAAAATCAGGGTCCGAGAG
GCCGCTCGAGAACGGGTGTTAGCAGATTTTGAGAAAAGTCACCTCGGCTTAGCAGCTCGATCCACTGAAATTGGA
AGGACAGGCAGGACCTCAACGGAACATGGTAGGGGCACAAAGCGCAAGTTTGAGTTTGACGCTTCAGCGGTCGAG
ACTCTACAGCGGGAAGCCGAAGAGACAGCTATGCGTAAAATAGAAAAGGAACAAGCCGAAGCATTGAAGAGCAAA
CTTCCAGATTTCTGGCTACCGTCTTTGACGCCGACCTACACCTCAAACGGACTTCCAACTTCTCTTCGGCAAGTC
AAGGTTCAGACGATGTGTCGAGGCGGGACTCCAGCCCATCCCGTATCCTTGAAGTCCTTGTTTCCAATCAAATTT
ACTTTTTTCGACGGTTCGTCTCAACAGCCTGGATCCAACGGTTCTCCATCAGATTCTGGAACTGTCAAGACAACT
TCTAGAAAGGATGAGTTGGATCCTATATGTCCGGCTTGTAAGAAGCAACTATCAAACAACGTACTTATCTCTGCG
GCGAAACCATGTGGACACGTCACTTGTAAAAGCTGTACAGATTCTCTTATTCGGACATCAAAACAGTGTATAGTT
TGTGACGAGCTGTTGAAGGAGAAAGACATACTCGAACTGAAGCGTGAAGGTACTGGATTCGCTGGTGGGGGAATC
GCTGAGGCTTCCAGGACAGGAGTGTCGTTCCAAGGATAA
Gene >AgabiH97|075080
ATGACGAAACATAGCAAGAATAACACCGCCTCGTCCATTTTCAGCTATGCAGAACGCAAGAAAACAGAATATGGC
ACTCAAAAGGTACGTCGTTAGCTGGCTCTATTGCACGCCCTCAGTCCTTAACACCCCGGAAGCAACGCCTTGGAA
ATGAGTCAATGCGTCAATTTGATGCCTGTACGCTGTGCTTAAATCGCGCCCGGGAAACTCTGGCATGTGAAGAAG
GGCATTTGTTTTGTAAAGAGTGTATTTATACAGATCTTTGTGAGAGCAACAGCACCTGGATATCTGCTTTTTACT
GACAGTTCCAGTGACGCAGAAAAAGGATATTAAGCGCCAGAAAGAAAAATTGGATGCGTGGAAACGGGAACACGA
GGAAGAGAAAATCAGGGTCCGAGAGGCCGCTCGAGAACGGGTGTTAGCAGATTTTGAGAAAAGTCACCTCGGCTT
AGCAGCTCGATCCACTGAAATTGGAAGGACAGGCAGGACCTCAACGGAACATGGTGAGATATCTTGTCATCAGCA
CAAAGTGGCTCATCTGATCCTTGTAGGTAGGGGCACAAAGCGCAAGTTTGAGTTTGACGCTTCAGCGGTCGAGAC
TCTACAGCGGGAAGCCGAAGAGACAGCTATGCGTAAAATAGAAAAGGAACAAGCCGAAGCATTGAAGAGCAAACT
TCCAGATTTCTGGCTACCGTCTTTGACGCCGACCTACACCTCAAACGGACTTCCAACTTCTCTTCGGCAAGTCAA
GGTTCAGACGATGTGTCGAGGCGGGACTCCAGCCCATCCCGTATCGTGAGCTCTCCTTCATCATTCCCAAGTATC
CATCTAAATTCTTGGCAGCTTGAAGTCCTTGTTTCCAATCAAATTTACTTTTTTCGACGGTTCGTCTCAACAGCC
TGGATCCAACGGTTCTCCATCAGATTCTGGAACTGTCAAGACAACTTCTAGAAAGGATGAGTTGGATCCTATATG
TCCGGCTTGTAAGAAGCAACTATCAAACAACGTACTTATCTCTGGTGGGATCCCTCTCTTGTTGTACTTGCCTTG
ATAGAAATGAAGTCTAAAGCGTTCCATCAGCGGCGAAACCATGTGGACACGTCACTTGTAAAAGCTGTACAGATT
CTCTTATTCGGACATCAAAACAGTGTATAGTTTGTGACGAGCTGTTGAAGGAGAAAGACATACTCGAACTGAAGC
GTGAAGGTAAGTAAACATTCAGCTTATGGGGATGACTTTTCTGAGATCGTTACTAGGTACTGGATTCGCTGGTGG
GGGAATCGCTGAGGCTTCCAGGACAGGAGTGTCGTTCCAAGGATAA

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