Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|073300
Gene name
Locationscaffold_4:1920374..1922270
Strand-
Gene length (bp)1896
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 4.8E-37 63 444

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 504 1.0E-43
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 51 499 9.0E-40
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 48 505 6.0E-39
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 46 443 3.0E-36
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 46 476 4.0E-35
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 504 1.0E-43
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 51 499 9.0E-40
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 48 505 6.0E-39
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 46 443 3.0E-36
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 46 476 4.0E-35
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 22 490 7.0E-35
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 46 265 6.0E-32
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 49 377 7.0E-30
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 48 440 3.0E-27
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 39 486 4.0E-27
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 48 504 5.0E-27
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 47 379 2.0E-26
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 7 265 2.0E-21
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 28 272 6.0E-21
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 46 450 2.0E-20
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 48 505 4.0E-20
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 6 265 1.0E-17
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 49 269 9.0E-17
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 99 499 6.0E-16
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 41 270 8.0E-16
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 27 269 4.0E-14
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 48 507 1.0E-13
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 41 235 1.0E-12
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 21 243 1.0E-11
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 45 232 4.0E-11
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 45 232 4.0E-11
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 53 267 2.0E-10
sp|P37489|YYBO_BACSU Uncharacterized transporter YybO OS=Bacillus subtilis (strain 168) GN=yybO PE=3 SV=1 60 484 2.0E-10
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 48 451 9.0E-10
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 29 245 1.0E-09
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 49 248 5.0E-09
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 48 188 3.0E-08
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 48 188 3.0E-08
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 154 277 4.0E-08
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 11 245 2.0E-07
sp|P42205|GUDP_PSEPU Probable glucarate transporter OS=Pseudomonas putida GN=gudP PE=3 SV=1 61 188 3.0E-07
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 53 251 7.0E-07
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.5

Transmembrane Domains

Domain # Start End Length
1 95 117 22
2 124 146 22
3 150 172 22
4 185 207 22
5 217 239 22
6 302 324 22
7 334 356 22
8 369 388 19
9 392 414 22
10 426 448 22
11 458 480 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|073300
MSGYLSTSQATDEEVRPLLSSQSHSGPQVDHSDAGLEFGGPKARMELEKKLLKKLDSRMSILVVIYVLNYIDRNS
AAAARLRGFEEDLGLEGSQFASILSIFYFGYILIQIPSNMFLSRIGKPSLYLPCCVAVWGTISFCTGFTTSYYGA
LFARFLLGFVEAAFYPGALYMIARWYKRNELSQRTTFFACGSLISNAFGSLIASGILDLMDGIFGYAAWRWLFFV
EGSLTVLVAIMAIFTLPDFPETEVIHWLTPAEHALARRRMIEDNAEDTQPPNAFNSSDQALKPDNAVAGLVLAFS
DWKVWYMAVTLFFLALSLSFHIYFPTLTATMGYNATISLLLCAPPWLVATVWSLWISRHSDTTGERCMHIVISLL
IGIGGFLLAMSTMNTAIRYVSLFLMAQSFAASMCFLAWASSTVSKPPAKRAVALALINTISQSGNMFGAFAWVNS
WGPSYNKSYAICAAASLLCILMCLWLRMTLKRLNQEMDMKDTQSDESVDRPRTRWRYHL*
Coding >AgabiH97|073300
ATGTCCGGGTACTTGTCAACCTCGCAAGCCACTGATGAAGAGGTCCGTCCTCTGCTCTCCTCTCAAAGTCATTCC
GGTCCACAGGTCGACCATTCTGATGCTGGTTTGGAATTTGGAGGACCCAAGGCCAGAATGGAGCTGGAGAAGAAA
CTCCTCAAAAAGCTGGACAGTCGGATGTCAATCCTGGTCGTCATATACGTCCTCAATTACATCGACCGGAATAGT
GCCGCTGCTGCTAGACTTCGCGGTTTTGAGGAAGACCTTGGCTTGGAGGGATCACAATTTGCCTCGATTTTGTCG
ATCTTCTATTTCGGATACATTCTAATACAGATACCTTCGAACATGTTTCTCAGTCGAATTGGCAAGCCGTCGTTG
TATCTGCCATGCTGCGTAGCAGTTTGGGGAACCATCTCGTTCTGTACAGGCTTCACAACCAGTTATTATGGCGCT
CTATTTGCGCGCTTCCTCCTCGGCTTTGTGGAGGCTGCCTTTTATCCCGGCGCCCTTTATATGATCGCGAGATGG
TACAAACGAAACGAACTCTCCCAGAGGACAACCTTCTTCGCTTGTGGGAGCTTAATCAGCAATGCGTTTGGGTCT
CTCATCGCTTCTGGTATCCTTGATTTAATGGATGGCATATTCGGATACGCGGCGTGGCGCTGGTTGTTTTTCGTG
GAAGGCAGCCTTACAGTTCTAGTTGCCATCATGGCAATTTTTACCCTACCTGATTTTCCTGAGACTGAGGTTATC
CATTGGCTCACCCCTGCTGAGCATGCTTTGGCCAGAAGGAGGATGATCGAAGATAATGCTGAGGACACGCAACCA
CCTAATGCCTTTAACTCATCCGACCAAGCCTTGAAGCCCGACAACGCAGTCGCAGGCCTCGTCCTTGCTTTCTCA
GACTGGAAAGTTTGGTACATGGCGGTTACCCTATTTTTCCTGGCTTTGTCTTTATCTTTCCATATCTACTTCCCC
ACACTCACTGCAACAATGGGTTACAACGCCACAATTTCACTTCTACTTTGCGCACCACCCTGGCTGGTCGCAACC
GTCTGGTCTCTTTGGATCTCGAGGCATTCTGACACGACTGGCGAACGGTGTATGCACATCGTCATCTCGCTGCTG
ATTGGTATCGGAGGATTCCTGCTGGCGATGTCAACGATGAACACCGCTATTCGATATGTCTCCCTCTTCTTGATG
GCTCAATCTTTTGCCGCTTCTATGTGTTTCCTTGCTTGGGCGTCATCAACAGTCTCCAAGCCACCAGCCAAGCGC
GCTGTAGCGTTGGCCCTTATCAACACCATATCACAAAGTGGAAACATGTTTGGGGCCTTTGCTTGGGTGAATTCT
TGGGGACCATCGTATAATAAATCTTACGCCATTTGTGCTGCGGCTTCGCTGCTGTGCATATTGATGTGTCTCTGG
TTAAGAATGACGTTGAAGCGGTTGAATCAAGAAATGGACATGAAAGATACACAAAGTGATGAGAGTGTAGACCGC
CCTAGGACGCGGTGGAGATACCATCTTTAG
Transcript >AgabiH97|073300
ATGTCCGGGTACTTGTCAACCTCGCAAGCCACTGATGAAGAGGTCCGTCCTCTGCTCTCCTCTCAAAGTCATTCC
GGTCCACAGGTCGACCATTCTGATGCTGGTTTGGAATTTGGAGGACCCAAGGCCAGAATGGAGCTGGAGAAGAAA
CTCCTCAAAAAGCTGGACAGTCGGATGTCAATCCTGGTCGTCATATACGTCCTCAATTACATCGACCGGAATAGT
GCCGCTGCTGCTAGACTTCGCGGTTTTGAGGAAGACCTTGGCTTGGAGGGATCACAATTTGCCTCGATTTTGTCG
ATCTTCTATTTCGGATACATTCTAATACAGATACCTTCGAACATGTTTCTCAGTCGAATTGGCAAGCCGTCGTTG
TATCTGCCATGCTGCGTAGCAGTTTGGGGAACCATCTCGTTCTGTACAGGCTTCACAACCAGTTATTATGGCGCT
CTATTTGCGCGCTTCCTCCTCGGCTTTGTGGAGGCTGCCTTTTATCCCGGCGCCCTTTATATGATCGCGAGATGG
TACAAACGAAACGAACTCTCCCAGAGGACAACCTTCTTCGCTTGTGGGAGCTTAATCAGCAATGCGTTTGGGTCT
CTCATCGCTTCTGGTATCCTTGATTTAATGGATGGCATATTCGGATACGCGGCGTGGCGCTGGTTGTTTTTCGTG
GAAGGCAGCCTTACAGTTCTAGTTGCCATCATGGCAATTTTTACCCTACCTGATTTTCCTGAGACTGAGGTTATC
CATTGGCTCACCCCTGCTGAGCATGCTTTGGCCAGAAGGAGGATGATCGAAGATAATGCTGAGGACACGCAACCA
CCTAATGCCTTTAACTCATCCGACCAAGCCTTGAAGCCCGACAACGCAGTCGCAGGCCTCGTCCTTGCTTTCTCA
GACTGGAAAGTTTGGTACATGGCGGTTACCCTATTTTTCCTGGCTTTGTCTTTATCTTTCCATATCTACTTCCCC
ACACTCACTGCAACAATGGGTTACAACGCCACAATTTCACTTCTACTTTGCGCACCACCCTGGCTGGTCGCAACC
GTCTGGTCTCTTTGGATCTCGAGGCATTCTGACACGACTGGCGAACGGTGTATGCACATCGTCATCTCGCTGCTG
ATTGGTATCGGAGGATTCCTGCTGGCGATGTCAACGATGAACACCGCTATTCGATATGTCTCCCTCTTCTTGATG
GCTCAATCTTTTGCCGCTTCTATGTGTTTCCTTGCTTGGGCGTCATCAACAGTCTCCAAGCCACCAGCCAAGCGC
GCTGTAGCGTTGGCCCTTATCAACACCATATCACAAAGTGGAAACATGTTTGGGGCCTTTGCTTGGGTGAATTCT
TGGGGACCATCGTATAATAAATCTTACGCCATTTGTGCTGCGGCTTCGCTGCTGTGCATATTGATGTGTCTCTGG
TTAAGAATGACGTTGAAGCGGTTGAATCAAGAAATGGACATGAAAGATACACAAAGTGATGAGAGTGTAGACCGC
CCTAGGACGCGGTGGAGATACCATCTTTAG
Gene >AgabiH97|073300
ATGTCCGGGTACTTGTCAACCTCGCAAGCCACTGATGAAGAGGTCCGTCCTCTGCTCTCCTCTCAAAGTCATTCC
GGTGATTTATATTTTGCCTCCCGTTCTGCATTCTATTCAGCTTATCCATCTTACAGGTCCACAGGTCGACCATTC
TGATGCTGGTTTGGAATTTGGAGGACCCAAGGCCAGAATGGAGCTGGAGAAGAAACTCCTCAAAAAGCTGGACAG
TCGGATGTCAATCCTGGTCGTCATATACGTCCTCAATTGTGAGTTTCAACTCGAGCCAATCAGTCAATGGTCAAT
CAAACACATTTGCAGACATCGACCGGAATAGTGCCGCGTACGCAATCTCACCTCTTTCCCATTTTTAATACACCT
GCATGTTTCCCCAGTGCTGCTAGACTTCGCGGTTTTGAGGAAGACCTTGGCTTGGAGGGATCACAATTTGCCTCG
ATTTTGTCGATCTTCTATTTCGGATACATTCTAATACAGATACCTTCGTAAGGAACCCCGGTTTCCGCGTTTTTC
CCCTGATAAATCGATACCGCAATTCAGGAACATGTTTCTCAGTCGAATTGGCAAGCCGTCGTTGTATCTGCCATG
CTGCGTAGCAGTTTGGGGAACCATCTCGTTCTGTACAGGTCAGTTCAGTCTATGAAGAGATTGGTCAATTAGATG
AAATCTTTCTCAGGCTTCACAACCAGGTACGAGCGATATTCCGCGCTGTAAGAGCGCCAACTAACGTTCTACTAG
TTATTATGGCGCTCTATTTGCGCGCTTCCTCCTCGGCTTTGTGGAGGCTGCCTTTTATCCCGGCGCCCTTTATAT
GATCGCGAGATGGTACAAACGAAACGAACTCTCCCAGAGGACAACCTTCTTCGCTTGTGGGAGCTTAATCAGCAA
TGCGTTTGGGTCTCTCATCGCTTCTGGTATCCTTGATTTAATGGATGGCATATTCGGATACGCGGCGTGGCGCTG
GTTGTTTTTCGTGGAAGGCAGCCTTACAGTTCTAGTTGCCATCATGGCAATTTTTACCCTACCTGATTTTCCTGA
GACTGAGGTTATCCATTGGCTCACCCCTGCTGAGCATGCTTTGGCCAGAAGGAGGATGATCGAAGATAATGCTGA
GGACACGCAACCACCTAATGCCTTTAACTCATCCGACCAAGCCTTGAAGCCCGACAACGCAGTCGCAGGCCTCGT
CCTTGCTTTCTCAGACTGGAAAGTTTGGTACATGGCGGTTACCCTATTTTTCCTGGCTTTGTCTTTATCTTTCCA
TATCTACTTCCCCACACTCACTGCAACAATGGGTTACAACGCCACAATTTCACTTCTACTTTGCGCACCACCCTG
GCTGGTCGCAACCGTCTGGTCTCTTTGGATCTCGAGGCATTCTGACACGACTGGCGAACGGTGTATGCACATCGT
CATCTCGCTGCTGATTGGTATCGGAGGATTCCTGCTGGCGATGTCAACGATGAACACCGCTATTCGATATGTCTC
CCTGTCAGTTATCTTGCTCTATTCTACGTTCGCTGTATCTCAGAACATAACTCTAGCTTCTTGATGGCTCAATCT
TTTGCCGCTTCTATGTGTTTCCTTGCTTGGGCGTCATCAACAGTCTCCAAGCCACCAGCCAAGCGCGCTGTAGCG
TTGGCCCTTATCAACACCATATCACAAAGTGGAAACATGTTTGGGGCCTTTGCTTGGGTGAATTCTTGGGGACCA
TCGTATAATAAATCTTACGCCATTTGTGCTGCGGCTTCGCTGCTGTGCATATTGATGTGTCTCTGGTTAAGAATG
ACGTTGAAGCGGTTGAATCAAGAAATGGACATGAAAGATACACAAAGTGATGAGAGTGTAGACCGCCCTAGGACG
CGGTGGAGATACCATCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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