Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|073030
Gene name
Locationscaffold_4:1849519..1852207
Strand+
Gene length (bp)2688
Transcript length (bp)1527
Coding sequence length (bp)1527
Protein length (aa) 509

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.2E-38 31 428

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 474 4.0E-102
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 7 474 5.0E-88
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 506 3.0E-75
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 5 480 5.0E-75
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 7 504 3.0E-67
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Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 474 4.0E-102
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 7 474 5.0E-88
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 1 506 3.0E-75
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 5 480 5.0E-75
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 7 504 3.0E-67
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 7 427 1.0E-37
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 5 428 2.0E-36
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 4 494 3.0E-35
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 7 508 5.0E-35
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 5 479 7.0E-34
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 3 480 5.0E-33
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 9 224 5.0E-33
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 2 429 1.0E-32
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 7 494 7.0E-32
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 2 249 1.0E-26
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 12 481 2.0E-26
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 1 347 1.0E-23
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 11 475 2.0E-23
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 9 240 3.0E-23
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 9 484 1.0E-22
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 9 224 2.0E-21
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 4 451 3.0E-21
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 5 450 1.0E-20
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 4 429 3.0E-20
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 97 209 3.0E-17
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 34 496 1.0E-11
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 10 408 4.0E-11
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 17 219 4.0E-09
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 33 197 3.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

Domain # Start End Length
1 89 108 19
2 113 135 22
3 148 170 22
4 180 202 22
5 286 308 22
6 323 345 22
7 352 374 22
8 379 401 22
9 414 431 17
10 446 468 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|073030
MSTTTDDAKMSRRILWKLDRRVLPPLALLWLANFIDRSNIGNARIAGLERDAHLHGNQFNAVLSVFYASYLVVEV
PSNIVMKKIKPNRWLPILVSLWGIVTIMTCFVNSYGGLLAIRLCLGFCEGGLLPGMVLYLSSIYKRHELQLRVGL
FYASASLSGAFGGLLASAIIHMEGVGGLAGWRWIFILEGIATILIGLLAALVLPADLATANCLTPEEREFAVRRY
QDDGKTIQVTPRLEDGYPKDEKLEHDAHTHAESVQSSVALETQTEDEVFEWREVVRGFLDIQVWLTGLAYFGLII
SLYSYSLFLPTIISGLGYSGAQAQLRTVPPYVPAVVLTVAVAYLSDRLKWRGPWILICLPLCIIGYVIAVTATTD
KVRYIAVFFMAAGIYPCGPCILSILPNNNRGHYKRATTTALQLAIANTGGFLATFVYTPDQAPRYLKGHSIVLAF
VVLAWLLIAANVCYCIWENKARREGRRQDNITKYIQLVREGKTKAPIGDRHPEFMFTI*
Coding >AgabiH97|073030
ATGTCTACCACGACCGATGATGCGAAGATGTCCCGGAGAATCCTCTGGAAGCTGGATCGCCGTGTCTTGCCGCCT
CTCGCATTGCTGTGGCTTGCCAACTTCATTGACCGGAGCAATATAGGAAATGCGAGGATTGCGGGCCTCGAGCGT
GATGCCCACCTCCATGGTAATCAGTTCAACGCGGTATTGAGCGTGTTTTACGCAAGTTACTTGGTCGTCGAAGTA
CCGTCAAATATTGTCATGAAAAAAATAAAGCCAAATCGCTGGCTTCCCATCCTTGTATCTCTCTGGGGAATTGTA
ACAATAATGACTTGTTTCGTCAATAGCTACGGGGGACTGCTGGCGATACGCCTCTGCCTTGGATTCTGCGAGGGC
GGCTTACTTCCGGGAATGGTCCTATACTTGAGTTCAATCTATAAGCGACACGAGCTGCAGTTAAGAGTAGGACTT
TTCTACGCTTCGGCGTCACTTTCTGGGGCTTTTGGCGGTCTTCTGGCCTCCGCAATCATCCATATGGAGGGCGTA
GGAGGTCTGGCGGGCTGGAGATGGATTTTCATTTTGGAAGGCATCGCTACTATTCTGATTGGCCTCCTTGCCGCC
CTGGTGCTTCCAGCTGACCTAGCCACTGCTAACTGCCTCACTCCGGAAGAGCGGGAATTTGCCGTTCGTCGGTAC
CAAGACGATGGCAAGACAATCCAGGTTACTCCCAGATTAGAAGACGGATATCCCAAGGACGAAAAGCTAGAACAT
GATGCTCATACTCACGCTGAGTCTGTCCAATCGTCTGTCGCATTGGAAACACAGACAGAGGATGAGGTGTTTGAG
TGGAGGGAAGTAGTTAGGGGTTTTCTCGACATACAGGTATGGTTGACTGGACTGGCTTATTTTGGCTTGATCATC
AGTCTTTACTCGTATTCTCTATTCCTGCCAACGATCATATCGGGCCTTGGTTATTCAGGCGCACAGGCACAGCTA
CGCACCGTTCCACCCTACGTGCCAGCTGTTGTTCTCACCGTCGCTGTTGCCTATCTTAGTGACCGATTGAAATGG
AGAGGTCCTTGGATTCTGATTTGTCTTCCACTTTGCATCATTGGATATGTCATTGCTGTCACAGCTACCACTGAT
AAAGTTAGATACATAGCTGTCTTCTTTATGGCTGCTGGCATTTATCCATGTGGACCTTGCATTCTGTCTATTCTT
CCGAATAATAACAGAGGCCATTACAAGAGAGCCACAACGACGGCGTTGCAACTGGCAATTGCCAATACGGGCGGC
TTTCTGGCTACCTTTGTATATACACCTGATCAGGCGCCGCGATACCTAAAAGGTCATTCGATTGTCTTAGCCTTC
GTGGTCCTAGCATGGCTTTTGATTGCCGCCAACGTGTGTTACTGTATCTGGGAGAACAAGGCTAGACGCGAGGGC
CGTCGTCAGGACAACATTACCAAGTATATACAGCTAGTGAGAGAAGGGAAAACGAAAGCCCCGATCGGGGATCGT
CATCCTGAGTTCATGTTTACAATTTAG
Transcript >AgabiH97|073030
ATGTCTACCACGACCGATGATGCGAAGATGTCCCGGAGAATCCTCTGGAAGCTGGATCGCCGTGTCTTGCCGCCT
CTCGCATTGCTGTGGCTTGCCAACTTCATTGACCGGAGCAATATAGGAAATGCGAGGATTGCGGGCCTCGAGCGT
GATGCCCACCTCCATGGTAATCAGTTCAACGCGGTATTGAGCGTGTTTTACGCAAGTTACTTGGTCGTCGAAGTA
CCGTCAAATATTGTCATGAAAAAAATAAAGCCAAATCGCTGGCTTCCCATCCTTGTATCTCTCTGGGGAATTGTA
ACAATAATGACTTGTTTCGTCAATAGCTACGGGGGACTGCTGGCGATACGCCTCTGCCTTGGATTCTGCGAGGGC
GGCTTACTTCCGGGAATGGTCCTATACTTGAGTTCAATCTATAAGCGACACGAGCTGCAGTTAAGAGTAGGACTT
TTCTACGCTTCGGCGTCACTTTCTGGGGCTTTTGGCGGTCTTCTGGCCTCCGCAATCATCCATATGGAGGGCGTA
GGAGGTCTGGCGGGCTGGAGATGGATTTTCATTTTGGAAGGCATCGCTACTATTCTGATTGGCCTCCTTGCCGCC
CTGGTGCTTCCAGCTGACCTAGCCACTGCTAACTGCCTCACTCCGGAAGAGCGGGAATTTGCCGTTCGTCGGTAC
CAAGACGATGGCAAGACAATCCAGGTTACTCCCAGATTAGAAGACGGATATCCCAAGGACGAAAAGCTAGAACAT
GATGCTCATACTCACGCTGAGTCTGTCCAATCGTCTGTCGCATTGGAAACACAGACAGAGGATGAGGTGTTTGAG
TGGAGGGAAGTAGTTAGGGGTTTTCTCGACATACAGGTATGGTTGACTGGACTGGCTTATTTTGGCTTGATCATC
AGTCTTTACTCGTATTCTCTATTCCTGCCAACGATCATATCGGGCCTTGGTTATTCAGGCGCACAGGCACAGCTA
CGCACCGTTCCACCCTACGTGCCAGCTGTTGTTCTCACCGTCGCTGTTGCCTATCTTAGTGACCGATTGAAATGG
AGAGGTCCTTGGATTCTGATTTGTCTTCCACTTTGCATCATTGGATATGTCATTGCTGTCACAGCTACCACTGAT
AAAGTTAGATACATAGCTGTCTTCTTTATGGCTGCTGGCATTTATCCATGTGGACCTTGCATTCTGTCTATTCTT
CCGAATAATAACAGAGGCCATTACAAGAGAGCCACAACGACGGCGTTGCAACTGGCAATTGCCAATACGGGCGGC
TTTCTGGCTACCTTTGTATATACACCTGATCAGGCGCCGCGATACCTAAAAGGTCATTCGATTGTCTTAGCCTTC
GTGGTCCTAGCATGGCTTTTGATTGCCGCCAACGTGTGTTACTGTATCTGGGAGAACAAGGCTAGACGCGAGGGC
CGTCGTCAGGACAACATTACCAAGTATATACAGCTAGTGAGAGAAGGGAAAACGAAAGCCCCGATCGGGGATCGT
CATCCTGAGTTCATGTTTACAATTTAG
Gene >AgabiH97|073030
ATGTCTACCACGACCGATGATGCGAAGATGTCCCGGAGAATCCTCTGGAAGCTGGATCGCCGTGTCTTGCCGCCT
CTCGCATTGGTAGGTCACTGGTGATTTGCCATTCTCAAACAACTAATAGACCATATTCCAGCTGTGGCTTGCCAA
CTTCATTGACCGGAGCAATATAGGAAATGCGAGGTATGTATATACATGGACTCATTCGACATTAGCTCATTCCAT
TGGAGGATTGCGGGCCTCGAGCGTGATGCCCACCTCCATGGTAATCAGTTCAACGCGGTATTGAGCGGTGGGTGT
TTCCTTATTTTGCGGCGTTCAAGAAAGATATTGAGACCGTTGCAAGTGTTTTACGCAAGGTAAGGCACAGTGGGT
CTCCGGGAGCGCAGGGATTCTGAGACCCCACGGCAGTTACTTGGTCGTCGAAGTACCGTCAAATATTGTCATGAA
AAAAATAAAGCCAAATGTATGTTTCTCATTCCGGGCTGGTCCATATACTTACCTGCGCTAGCGCTGGCTTCCCAT
CCTTGTATCTCTCTGGGGAATTGTAACAATAATGACTTGTTTCGTCAGTCTTAAACTTTTTTTTATGCTTTGATT
CAGATCCATATTTTTTCTTCAGGTCAATAGCTACGGGGGACTGCTGGCGATACGCCTCTGCCTTGGATTCTGCGA
GGGCGGCTTACTTCCGGGAATGGTGAGCGTTACGATGCTTTCGAATTTTAGTGACTTCCTCATTTGCTCCAAAGG
TCCTATACTTGAGTTCAATCTATAAGCGACACGAGCTGCAGTTAAGGTAAAGTGATTTGACATCCTTATTACCGT
CCTTTTTCATTGGGCTTTTAGAGTAGGACTTTTCTACGCTTCGGGTATGTTCTCACCGCTTTTGACCCTGCTTCC
GATCACTCACGCGTATCATCGTAACGTCTCAAGCGTCACTTTCTGGGGCTTTTGGCGGTCAGTCTTCTTCAAATC
GGACTTTTTTTCTATACATAGATCACGAAATTAGGTCTTCTGGCCTCCGCAATCATCCATATGGAGGGCGTAGGA
GGTCTGGCGGGCTGGAGATGGATTTTCGTATGTTTTCGTCTTGCCGTGAACGACGAATGACTTGACTTCATCAGA
TTTTGGAAGGCATCGCTACTATTCTGATTGGCCTCCTTGCCGCCCTGGTGCTTCCAGCTGACCTAGCCACTGCTA
ACTGCCTCACTCCGGAAGAGCGGGAATTTGCCGGTGCGTTCTTATCTTCATACCTCCTACCTCTCAAGTTATAAG
ACATGATATATATAGTTCGTCGGTACCAAGACGATGGCAAGACAATCCAGGTTACTCCCAGATTAGAAGACGGAT
ATCCCAAGGACGAAAAGCTAGAACATGATGCTCATACTCACGCTGAGTCTGTCCAATCGTCTGTCGCATTGGAAA
CACAGACAGAGGATGAGGTGTTTGAGTGGAGGGAAGTAGTTAGGGGTTGGTTTTGCATATTTTACCTTATTTCCT
ACGATAAACTTGTTTTGCAGGTTTTCTCGACATACAGGTATGGTTGACTGGACTGGCTTATTTTGGCTTGATCAT
CAGTCTTTACTCGTATTCTCTATTCCTGTGAGTCGTTTTTAGCATGGTTACCCCATGTATTCTGAATTTGTCGTA
GGCCAACGATCATATCGGGCCTTGGTTATTCAGGCGCACAGGCACAGCTACGCACCGGTACGTTATTCAAACTGT
GCTATTAGTCCAGTCCTAAGAAATCTCCTTAGTTCCACCCTACGTGCCAGCTGTTGTTCTCACCGGCAAGTCTCC
TCATGACCATCTATCGATAGTCTTGCTGAAATTTCCCTAGTCGCTGTTGCCTATCTTAGTGACCGATTGAAATGG
AGAGGTCCTTGGATTCTGATTTGTCTTCCACTTTGCATCATTGGTGAGCAGTTCCCCTCAGACAATCTTGGAACT
TGAGGAAAACTCAGCACGGGATGTAGGATATGTCATTGCTGTCACAGCTACCACTGATAAAGTTAGATACATAGC
TGTCTTCTTTATGGCTGCTGGCATGTGAGTACCGCAGTGGTACCCTCTCACATAATCGTGTGACATTGATGACGC
TTACTTATTCAGTTATCCATGTGGACCTTGCATTCTGTGAGATCTTCGTGATTATTGGTCCGTTGGATATATAAC
CATTGCTTTAGGTCTATTCTTCCGAATAATAACAGAGGCCATTACAAGAGAGCCACAACGACGGCGTTGCAACTG
GCAATTGCCAATACGGGGTAAGTCCAGCAGCCGACTTCCGACCTGGCTAACCCGCTAACCGAACCGAACGAAAAG
CGGCTTTCTGGCTACCTTTGTATATACACCTGGTCAGCGTCTCGCTGAAACTATAATGTCGTCATCTTTGTTCAC
CTATCTACCACAGATCAGGCGCCGCGATACCTAAAAGGTCATTCGATTGTCTTAGCCTTCGTGGTCCTAGCATGG
CTTTTGATTGCCGCCAACGTGTATGTATCAATGCTTTAGTATTGAATTCGCCGAGTCTGATGTGTTTAAAGGTGT
TACTGTATCTGGGAGAACAAGGCTAGACGCGAGGGCCGTCGTCAGGACAACATTACCAAGTATATACAGCTAGTG
AGAGAAGGGAAAACGAAAGCCCCGATCGGGGATCGTCATCCTGAGTTCATGTTTACAATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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