Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|072990
Gene name
Locationscaffold_4:1836279..1839451
Strand+
Gene length (bp)3172
Transcript length (bp)2781
Coding sequence length (bp)2781
Protein length (aa) 927

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13418 Kelch_4 Galactose oxidase, central domain 6.9E-05 120 150

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 490 507 17
2 520 542 22
3 562 584 22
4 761 783 22
5 788 810 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|072990
MARSIPVFIFLLLSLALADDIATNTPVPPLQWINLTNLLQGNSPPPLKDAAIGYDETSRSIILFGGESQGGFPQG
QTYLLNLDSLTWDVPSPPSGLHRTPPARSAALAGEDFAASNRRAFVVVGGKGSDEKALSDVWAFDFNNEFWSPVS
VLSGGPSARWGASGGIDPRVSPFQDPVVPGPNNTFYMAGGTDGVTASPLSEVWRLHLSGTLSSNLPNSTSGSWDR
LTIGSFPARVGDGNTVVGQQIVAVGGCGAAQTSDSCASQDSFVINVARNSGISPAACPIPRLGPAVTPNFNTFTP
SFASQAFMVLGTFNESLWKDDGSPEKGGVDVLDINTGTWTRVMPSGDPGSSGSLTLETFPSPREGASILSYQMGL
VGSSRNSSADTIVFGGRDAAGKYLSEVWLLRAYKGVITMSDSQWDGFGNGRLQTGVAADGQGVKIRYLSQCASPP
ISTSSVTPSSSSGPAPTGMTSPGPAVLEFQVYRTSLSHKLLAVLSLIVIQVAMVVLRNSIPFPFTYMFTAIGIGG
YTLGVTGLALAFSTISIAPSLEKRSLPSLPSPHLRTGHGLAGLVFFACLYVLVPVWMFATATAEYLRGPSRKRYS
MSMAAEAVEEKSEQQTTGPSLSTPQSVHNVSPPSSPRPRTQSWGPSSLWRRSLEAGFSSDSDSVTSGTPRAFEVV
NRPRRFRQSSGATAPIEAPRPASRSLGEIDWLLRRRSLNAVGELDYAIAQAQNARHSTPGTADILLVPEDDPSNI
PAKLPTVSQICLHLFIHASILGLNVVALDMLWTNASKVFFILFLIWIIVFYVSIFLLAWNYRPSVSILSTLLYRL
RQPPSVQPTSEKSSTPLPTSSPTSRLTPFQNSGPYLHQPPYRTAATDEYSGSHFGPRSVEAEEDDEVDEITRQRI
IEEEMDRREVSIVTVPKRRLWVANPS*
Coding >AgabiH97|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG
CAGACATATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCAGGCCTCCACCGAACTCCT
CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG
AAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC
GTGTTATCTGGTGGTCCCTCTGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT
CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCT
GAAGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA
TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC
GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCC
GGAATATCTCCAGCGGCGTGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC
TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAA
AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGC
TCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG
GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT
GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT
CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAATGTGCATCCCCCCCT
ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGACAAGTCCTGGTCCTGCA
GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA
GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT
TATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA
CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT
GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTACTCG
ATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCCAAGCCTGAGTACCCCTCAA
AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA
CGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC
AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT
CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCGCACAG
GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT
CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA
GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC
TACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG
CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG
CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGCCACAGATGAGTATTCT
GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAATCACCAGACAGCGAATC
ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT
TCTTAA
Transcript >AgabiH97|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG
CAGACATATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCAGGCCTCCACCGAACTCCT
CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG
AAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC
GTGTTATCTGGTGGTCCCTCTGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT
CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCT
GAAGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA
TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC
GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCC
GGAATATCTCCAGCGGCGTGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC
TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAA
AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGC
TCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG
GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT
GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT
CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAATGTGCATCCCCCCCT
ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGACAAGTCCTGGTCCTGCA
GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA
GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT
TATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA
CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT
GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTACTCG
ATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCCAAGCCTGAGTACCCCTCAA
AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA
CGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC
AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT
CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCGCACAG
GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT
CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA
GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC
TACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG
CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG
CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGCCACAGATGAGTATTCT
GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAATCACCAGACAGCGAATC
ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT
TCTTAA
Gene >AgabiH97|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGGTACTTGTTTTTTTTTTGACCTCTCTCTATTCCCTCACAGATCGTCTCCCCA
GTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGGCAGACATATTTGTACGTTTTCA
TCCTCCCGATAAGCTTTTGTTCTCACTCACCCATCCTCAGGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTT
CGCCCCCCTCAGGCCTCCACCGAACTCCTCCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCA
AGTATGTCGGTCTCCCCGTCATTTACTCATTTACTCACCTTTACTCCCCAGTCGACGTGCTTTTGTAGTAGTCGG
AGGGAAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGTGCGCTTTTTCAGTGTTCTTGGTGCATGCCTGTA
GTTCATCTTCAAACAGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCCGTGTTATCTGGTGGTCCCTC
TGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGATCCTGTGGTCCCGGGACCGAA
CAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCTGAAGTGTGGAGGTTGCACCT
TTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGATTGACAATAGGTTCATTTCC
AGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGCGGCTGTGGTGCAGCTCAAAC
CAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCCGGAATATCTCCAGCGGCGTG
CCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCCTCATTCGCTTCTCAGGCCTT
CATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAAAAGGGTGGAGTAGTACGTGT
CCTTTTTGTTGTCATTTTCTCAATATTGGGCAATTAACGCTATACAAGGACGTTCTCGACATTAACACCGGTACT
TGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGCTCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGT
GAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTGGTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTA
AGTTGTTCCGTTATACATTCTCATTTGGCTTTGATGCACACACATATACACACAGGTTTTCGGTGGCCGAGATGC
AGCCGGGAAATATCTCTCTGAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATG
GGACGGTTTCGGGAACGGTCGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTC
TCAATGTGCATCCCCCCCTATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCAT
GACAAGTCCTGGTCCTGCAGTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCT
CTCACTAATCGTAATACAAGTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCAC
GGCGATTGGTATTGGAGGTTATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCC
GAGTCTGGAGAAGCGCTCACTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGT
TTTTTTCGCATGCCTATATGTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACC
ATCTAGAAAACGTTACTCGATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCC
AAGCCTGAGTACCCCTCAAAGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGG
CCCTTCCAGTCTATGGAGACGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCC
GCGTGCATTTGAAGTTGTCAACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACC
CCGCCCTGCATCAAGGAGTCTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGTGAGTCG
ACTGTATATCTCTTTCCTCATCAATCATCTTTAATGCTGTATTTTATTCTTTTCATTTTTTCAGGGAGAGCTTGA
TTATGCTATCGCACAGGCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGA
TGATCCATCAAATATTCCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCAT
CCTGGGATTGAATGTAGTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCAT
CTGGATAATTGTTTTCTACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCAC
TCTCTTGTATCGTCTGCGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTC
ATCGCCTACTTCACGGCTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGC
CACAGATGAGTATTCTGGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAAT
CACCAGACAGCGAATCATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCT
GTGGGTGGCTAATCCTTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail