Protein ID | AgabiH97|072990 |
Gene name | |
Location | scaffold_4:1836279..1839451 |
Strand | + |
Gene length (bp) | 3172 |
Transcript length (bp) | 2781 |
Coding sequence length (bp) | 2781 |
Protein length (aa) | 927 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13418 | Kelch_4 | Galactose oxidase, central domain | 6.9E-05 | 120 | 150 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 490 | 507 | 17 |
2 | 520 | 542 | 22 |
3 | 562 | 584 | 22 |
4 | 761 | 783 | 22 |
5 | 788 | 810 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|072990 MARSIPVFIFLLLSLALADDIATNTPVPPLQWINLTNLLQGNSPPPLKDAAIGYDETSRSIILFGGESQGGFPQG QTYLLNLDSLTWDVPSPPSGLHRTPPARSAALAGEDFAASNRRAFVVVGGKGSDEKALSDVWAFDFNNEFWSPVS VLSGGPSARWGASGGIDPRVSPFQDPVVPGPNNTFYMAGGTDGVTASPLSEVWRLHLSGTLSSNLPNSTSGSWDR LTIGSFPARVGDGNTVVGQQIVAVGGCGAAQTSDSCASQDSFVINVARNSGISPAACPIPRLGPAVTPNFNTFTP SFASQAFMVLGTFNESLWKDDGSPEKGGVDVLDINTGTWTRVMPSGDPGSSGSLTLETFPSPREGASILSYQMGL VGSSRNSSADTIVFGGRDAAGKYLSEVWLLRAYKGVITMSDSQWDGFGNGRLQTGVAADGQGVKIRYLSQCASPP ISTSSVTPSSSSGPAPTGMTSPGPAVLEFQVYRTSLSHKLLAVLSLIVIQVAMVVLRNSIPFPFTYMFTAIGIGG YTLGVTGLALAFSTISIAPSLEKRSLPSLPSPHLRTGHGLAGLVFFACLYVLVPVWMFATATAEYLRGPSRKRYS MSMAAEAVEEKSEQQTTGPSLSTPQSVHNVSPPSSPRPRTQSWGPSSLWRRSLEAGFSSDSDSVTSGTPRAFEVV NRPRRFRQSSGATAPIEAPRPASRSLGEIDWLLRRRSLNAVGELDYAIAQAQNARHSTPGTADILLVPEDDPSNI PAKLPTVSQICLHLFIHASILGLNVVALDMLWTNASKVFFILFLIWIIVFYVSIFLLAWNYRPSVSILSTLLYRL RQPPSVQPTSEKSSTPLPTSSPTSRLTPFQNSGPYLHQPPYRTAATDEYSGSHFGPRSVEAEEDDEVDEITRQRI IEEEMDRREVSIVTVPKRRLWVANPS* |
Coding | >AgabiH97|072990 ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG CAGACATATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCAGGCCTCCACCGAACTCCT CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG AAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC GTGTTATCTGGTGGTCCCTCTGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCT GAAGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCC GGAATATCTCCAGCGGCGTGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAA AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGC TCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAATGTGCATCCCCCCCT ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGACAAGTCCTGGTCCTGCA GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT TATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTACTCG ATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCCAAGCCTGAGTACCCCTCAA AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA CGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCGCACAG GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC TACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGCCACAGATGAGTATTCT GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAATCACCAGACAGCGAATC ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT TCTTAA |
Transcript | >AgabiH97|072990 ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG CAGACATATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCAGGCCTCCACCGAACTCCT CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG AAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC GTGTTATCTGGTGGTCCCTCTGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCT GAAGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCC GGAATATCTCCAGCGGCGTGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAA AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGC TCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAATGTGCATCCCCCCCT ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGACAAGTCCTGGTCCTGCA GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT TATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTACTCG ATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCCAAGCCTGAGTACCCCTCAA AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA CGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCGCACAG GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC TACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGCCACAGATGAGTATTCT GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAATCACCAGACAGCGAATC ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT TCTTAA |
Gene | >AgabiH97|072990 ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACCAATACT CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT GCCATAGGATACGATGAAACCAGGTACTTGTTTTTTTTTTGACCTCTCTCTATTCCCTCACAGATCGTCTCCCCA GTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGGCAGACATATTTGTACGTTTTCA TCCTCCCGATAAGCTTTTGTTCTCACTCACCCATCCTCAGGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTT CGCCCCCCTCAGGCCTCCACCGAACTCCTCCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCA AGTATGTCGGTCTCCCCGTCATTTACTCATTTACTCACCTTTACTCCCCAGTCGACGTGCTTTTGTAGTAGTCGG AGGGAAGGGATCTGATGAGAAGGCTCTTTCAGATGTTTGGGTGCGCTTTTTCAGTGTTCTTGGTGCATGCCTGTA GTTCATCTTCAAACAGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCCGTGTTATCTGGTGGTCCCTC TGCTCGATGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGATCCTGTGGTCCCGGGACCGAA CAACACTTTTTACATGGCAGGCGGTACAGATGGAGTGACAGCCTCCCCCCTATCTGAAGTGTGGAGGTTGCACCT TTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGATTGACAATAGGTTCATTTCC AGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGCGGCTGTGGTGCAGCTCAAAC CAGTGACTCCTGTGCTAGCCAAGATTCCTTCGTGATTAACGTGGCGCGTAATTCCGGAATATCTCCAGCGGCGTG CCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCCTCATTCGCTTCTCAGGCCTT CATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCCTGAAAAGGGTGGAGTAGTACGTGT CCTTTTTGTTGTCATTTTCTCAATATTGGGCAATTAACGCTATACAAGGACGTTCTCGACATTAACACCGGTACT TGGACTCGAGTTATGCCTTCTGGCGATCCAGGAAGCTCTGGGTCGCTGACGTTAGAGACCTTTCCCAGTCCACGT GAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTGGTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTA AGTTGTTCCGTTATACATTCTCATTTGGCTTTGATGCACACACATATACACACAGGTTTTCGGTGGCCGAGATGC AGCCGGGAAATATCTCTCTGAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATG GGACGGTTTCGGGAACGGTCGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTC TCAATGTGCATCCCCCCCTATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCAT GACAAGTCCTGGTCCTGCAGTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCT CTCACTAATCGTAATACAAGTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCAC GGCGATTGGTATTGGAGGTTATACTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCC GAGTCTGGAGAAGCGCTCACTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGT TTTTTTCGCATGCCTATATGTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACC ATCTAGAAAACGTTACTCGATGTCAATGGCCGCTGAAGCAGTCGAAGAGAAATCCGAACAGCAGACCACAGGTCC AAGCCTGAGTACCCCTCAAAGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGG CCCTTCCAGTCTATGGAGACGTAGCTTGGAGGCTGGGTTTTCTAGCGATAGCGATTCTGTCACGTCTGGCACGCC GCGTGCATTTGAAGTTGTCAACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACC CCGCCCTGCATCAAGGAGTCTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGTGAGTCG ACTGTATATCTCTTTCCTCATCAATCATCTTTAATGCTGTATTTTATTCTTTTCATTTTTTCAGGGAGAGCTTGA TTATGCTATCGCACAGGCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGA TGATCCATCAAATATTCCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCAT CCTGGGATTGAATGTAGTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCAT CTGGATAATTGTTTTCTACGTTTCGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCAC TCTCTTGTATCGTCTGCGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTC ATCGCCTACTTCACGGCTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTACTGCCGC CACAGATGAGTATTCTGGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGATGACGAAGTAGACGAAAT CACCAGACAGCGAATCATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCT GTGGGTGGCTAATCCTTCTTAA |