Fungal Genomics

at Utrecht University

General Properties

Protein ID	AgabiH97\|072940
Gene name
Location	scaffold_4:1829391..1830234
Strand	-
Gene length (bp)	843
Transcript length (bp)	630
Coding sequence length (bp)	630
Protein length (aa)	210

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03227	GILT	Gamma interferon inducible lysosomal thiol reductase (GILT)	9.9E-09	37	117

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Yes
GO:0003674	molecular_function	No
GO:0016491	oxidoreductase activity	No
GO:0003824	catalytic activity	No
GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97\|072940 MHLPLLTLLFVLVSASPHVPLVDQTASDRTFDTRVPVQLGVMSKCPDALLCESTFNEVLGKVGDKMDLSLVYVAK FDESKPDFGGIICKHGAEECAGNCQNFEGIAQIGKPSVALKCAEAAQIDWNASGAGQCAGEDGSGKGDEGVDLLR KSVRLAHDLEVTKSCTIIINSRRVCVHDGTWKECEGGHTVNDFVRQINDEYDRLNSFRG*
Coding	>AgabiH97\|072940 ATGCACCTTCCTCTGCTCACTCTCCTTTTCGTCCTCGTCTCTGCATCCCCACATGTCCCCCTTGTTGACCAGACG GCGTCAGATAGAACTTTTGACACCAGGGTACCAGTTCAGCTTGGGGTAATGAGCAAATGCCCCGACGCCCTCTTG TGTGAATCTACTTTCAATGAGGTGCTCGGGAAAGTAGGCGACAAAATGGACCTATCGCTTGTCTATGTTGCGAAA TTTGATGAATCCAAGCCTGACTTTGGGGGCATCATCTGCAAACATGGAGCAGAGGAATGCGCAGGAAATTGTCAG AATTTTGAAGGGATAGCCCAGATAGGAAAGCCCAGTGTCGCCCTGAAATGCGCCGAAGCTGCGCAAATCGATTGG AACGCGTCTGGGGCGGGCCAGTGTGCCGGGGAAGACGGTAGTGGTAAAGGAGATGAAGGTGTGGATCTTCTTCGG AAAAGCGTGAGGCTGGCTCACGACTTGGAAGTCACTAAAAGCTGCACAATCATTATCAATTCACGTAGAGTATGC GTGCACGATGGCACCTGGAAGGAATGCGAGGGCGGCCATACTGTTAATGACTTTGTTCGCCAAATCAACGACGAG TATGATAGACTCAACTCTTTCCGAGGTTAG
Transcript	>AgabiH97\|072940 ATGCACCTTCCTCTGCTCACTCTCCTTTTCGTCCTCGTCTCTGCATCCCCACATGTCCCCCTTGTTGACCAGACG GCGTCAGATAGAACTTTTGACACCAGGGTACCAGTTCAGCTTGGGGTAATGAGCAAATGCCCCGACGCCCTCTTG TGTGAATCTACTTTCAATGAGGTGCTCGGGAAAGTAGGCGACAAAATGGACCTATCGCTTGTCTATGTTGCGAAA TTTGATGAATCCAAGCCTGACTTTGGGGGCATCATCTGCAAACATGGAGCAGAGGAATGCGCAGGAAATTGTCAG AATTTTGAAGGGATAGCCCAGATAGGAAAGCCCAGTGTCGCCCTGAAATGCGCCGAAGCTGCGCAAATCGATTGG AACGCGTCTGGGGCGGGCCAGTGTGCCGGGGAAGACGGTAGTGGTAAAGGAGATGAAGGTGTGGATCTTCTTCGG AAAAGCGTGAGGCTGGCTCACGACTTGGAAGTCACTAAAAGCTGCACAATCATTATCAATTCACGTAGAGTATGC GTGCACGATGGCACCTGGAAGGAATGCGAGGGCGGCCATACTGTTAATGACTTTGTTCGCCAAATCAACGACGAG TATGATAGACTCAACTCTTTCCGAGGTTAG
Gene	>AgabiH97\|072940 ATGCACCTTCCTCTGCTCACTCTCCTTTTCGTCCTCGTCTCTGCATCCCCACATGTCCCCCTTGTTGACCAGACG GCGTCAGATAGAACTTTTGACACCAGGGTACCAGTTCAGCTTGGGGTAATGAGCAAATGCCCCGACGCCCTCTTG TGTGAATCTACTTTCAATGAGGTGCTCGGGAAAGTAGGCGACAAAATGGACCTATCGCTTGTCTATGTTGCGAAG TACATAGTTCTTCTCGTTGAATTACAACATTCTCCTTTTGACACATATCTAGATTTGATGAATCCAAGCCTGACT TTGGGGGCATCATCTGCAAACATGGAGCAGAGGAATGCGCAGGAAATGTACAGCAACTATGTATCGCTAAATATG CATCCCCGGACCAATGATGGAACTTTGTTCAGTGTCAGAATTTTGAAGGGATAGCCCAGATAGGAAAGCCCAGTG TCGCCCTGAAATGCGCCGAAGCTGCGCAAATCGATTGGAACGCGTCTGGGGCGGGCCAGTGTGCCGGGGAAGACG GTAGTGGTAAAGGAGATGAAGGTGTGGATCTTCTTCGGAAAAGCGTGAGGCTGGCTCACGACTTGGAAGTCACGT AAGTTTCTCAAACCTTTGCCACGTTTTTCTCTATTCATCTCAATTACAGTAAAAGCTGCACAATCATTATCAATT CACGTAGAGTATGCGTGCACGATGGCACCTGGAAGGAATGCGAGGTGTGTTTTCCCGACACTGTCTTTGATTTAG AACTCAAGTGGTTCCCAGGGCGGCCATACTGTTAATGACTTTGTTCGCCAAATCAACGACGAGTATGATAGACTC AACTCTTTCCGAGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail