Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|071710
Gene name
Locationscaffold_4:1573018..1575313
Strand-
Gene length (bp)2295
Transcript length (bp)1404
Coding sequence length (bp)1404
Protein length (aa) 468

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.4E-33 37 401

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 18 455 4.0E-155
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 20 453 3.0E-126
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 20 449 9.0E-70
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 13 449 4.0E-54
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 466 2.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 18 455 4.0E-155
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 20 453 3.0E-126
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 20 449 9.0E-70
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 13 449 4.0E-54
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 14 466 2.0E-35
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 15 453 2.0E-32
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 19 448 2.0E-31
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 19 458 8.0E-30
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 14 231 5.0E-27
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 21 453 6.0E-26
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 21 346 6.0E-26
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 21 232 3.0E-25
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 15 452 3.0E-24
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 23 467 4.0E-24
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 23 455 9.0E-23
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 15 467 3.0E-19
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 5 239 2.0E-18
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 19 208 3.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 19 239 3.0E-16
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 19 307 1.0E-15
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 20 452 3.0E-14
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 17 239 4.0E-14
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 38 251 4.0E-13
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 17 451 1.0E-12
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 32 243 4.0E-12
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 81 254 2.0E-11
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 26 260 1.0E-09
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 17 247 2.0E-09
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 15 208 1.0E-08
sp|P42205|GUDP_PSEPU Probable glucarate transporter OS=Pseudomonas putida GN=gudP PE=3 SV=1 27 164 5.0E-07
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 44 263 4.0E-06
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 44 263 4.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 72 94 22
2 98 120 22
3 158 180 22
4 195 214 19
5 331 353 22
6 357 376 19
7 389 411 22
8 421 443 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|071710
MVRPSFIKQVLLGHTPSTRQESRLLLKIDWFILSYCCLMYFTNYLDRSNINNAFVSGMKEDLNMFGKEINNINTI
FTCGYIIGMIPNNIMLQVVSPRIWLPSMQIVWAILTFCTSAVHRVEQIYAIRFFQGIAESSTFVGVHYILGSWYK
STELGKRSGIFTSSGLVGTLFSGILQAAVYKHLDGVSSLSGWRWLFIVDGIITVPIAVYGFFIFPDFPRTTKAFY
LTQEERELAYTRLQGEIQVDRPPLSWNLTRRILTRWRWYACSLLFAISGETESFGSNNLMGQWLKAIGGYTIEQI
DYYPSGATAVAIAATLICATWTDYSRVRWPVLICMATACIIAAICILVWSSPIGLKFFAYYIAGVSYAGQATTFA
WANEICADDDQERSVVLASMNMWNNVINAWWSIVFYPATDAPKFTRGMIAMLCVSVATLAVTYLVYYLERREHRY
RREPQPPSPELEMDKEK*
Coding >AgabiH97|071710
ATGGTGCGACCCAGTTTCATCAAACAAGTTCTACTGGGGCACACCCCCTCTACCCGGCAAGAGTCCAGGCTTTTG
CTAAAAATTGACTGGTTCATCTTGTCGTACTGTTGTTTGATGTACTTCACCAACTACTTGGATAGGTCGAACATC
AATAATGCCTTCGTATCGGGAATGAAAGAAGACCTCAATATGTTTGGAAAGGAAATAAACAACATAAACACGATT
TTCACTTGTGGTTATATTATCGGAATGATTCCCAACAACATCATGTTGCAAGTCGTGTCACCACGCATTTGGTTA
CCTTCGATGCAGATTGTTTGGGCAATTCTGACGTTCTGCACCAGCGCAGTGCATAGGGTCGAGCAGATATATGCA
ATTCGGTTTTTCCAAGGAATCGCTGAGTCATCGACGTTCGTCGGAGTGCACTACATCCTCGGCTCATGGTACAAA
TCGACCGAATTAGGCAAGCGTTCGGGTATCTTCACAAGTTCAGGACTTGTAGGAACCCTATTTTCCGGCATTTTA
CAAGCCGCGGTATATAAGCATCTCGACGGAGTATCCAGTCTTAGCGGTTGGCGTTGGCTGTTCATTGTGGATGGA
ATAATCACAGTACCCATCGCAGTGTATGGATTTTTTATTTTCCCCGATTTTCCGCGGACGACGAAAGCCTTTTAC
CTGACACAAGAGGAGCGTGAGTTAGCCTACACCAGACTACAAGGAGAAATACAAGTGGACCGGCCACCTCTAAGC
TGGAACCTTACCCGCCGAATTCTCACTAGGTGGAGATGGTATGCTTGCAGTTTACTGTTCGCCATTTCTGGCGAG
ACGGAAAGTTTCGGTTCCAATAATCTGATGGGTCAATGGCTCAAAGCTATCGGTGGATACACCATTGAACAGATA
GATTACTACCCTTCAGGGGCTACCGCCGTTGCAATTGCAGCTACTTTGATTTGTGCGACGTGGACAGATTATAGT
CGTGTCCGTTGGCCTGTTTTGATATGCATGGCAACTGCATGCATTATCGCGGCTATATGTATTCTGGTCTGGAGT
AGCCCAATAGGTCTCAAGTTCTTTGCGTACTATATCGCGGGCGTTTCGTATGCAGGACAAGCTACCACCTTCGCG
TGGGCTAACGAGATATGTGCTGATGACGACCAAGAAAGGAGTGTTGTCTTGGCCTCCATGAACATGTGGAATAAT
GTGATCAACGCATGGTGGTCCATCGTCTTTTACCCAGCAACTGACGCACCGAAATTCACAAGGGGGATGATTGCC
ATGCTGTGCGTTAGCGTTGCTACCCTCGCTGTGACGTATTTAGTTTATTATCTGGAGCGGCGGGAACATCGGTAT
AGGCGAGAACCACAGCCCCCAAGTCCCGAGCTGGAGATGGACAAAGAAAAATAG
Transcript >AgabiH97|071710
ATGGTGCGACCCAGTTTCATCAAACAAGTTCTACTGGGGCACACCCCCTCTACCCGGCAAGAGTCCAGGCTTTTG
CTAAAAATTGACTGGTTCATCTTGTCGTACTGTTGTTTGATGTACTTCACCAACTACTTGGATAGGTCGAACATC
AATAATGCCTTCGTATCGGGAATGAAAGAAGACCTCAATATGTTTGGAAAGGAAATAAACAACATAAACACGATT
TTCACTTGTGGTTATATTATCGGAATGATTCCCAACAACATCATGTTGCAAGTCGTGTCACCACGCATTTGGTTA
CCTTCGATGCAGATTGTTTGGGCAATTCTGACGTTCTGCACCAGCGCAGTGCATAGGGTCGAGCAGATATATGCA
ATTCGGTTTTTCCAAGGAATCGCTGAGTCATCGACGTTCGTCGGAGTGCACTACATCCTCGGCTCATGGTACAAA
TCGACCGAATTAGGCAAGCGTTCGGGTATCTTCACAAGTTCAGGACTTGTAGGAACCCTATTTTCCGGCATTTTA
CAAGCCGCGGTATATAAGCATCTCGACGGAGTATCCAGTCTTAGCGGTTGGCGTTGGCTGTTCATTGTGGATGGA
ATAATCACAGTACCCATCGCAGTGTATGGATTTTTTATTTTCCCCGATTTTCCGCGGACGACGAAAGCCTTTTAC
CTGACACAAGAGGAGCGTGAGTTAGCCTACACCAGACTACAAGGAGAAATACAAGTGGACCGGCCACCTCTAAGC
TGGAACCTTACCCGCCGAATTCTCACTAGGTGGAGATGGTATGCTTGCAGTTTACTGTTCGCCATTTCTGGCGAG
ACGGAAAGTTTCGGTTCCAATAATCTGATGGGTCAATGGCTCAAAGCTATCGGTGGATACACCATTGAACAGATA
GATTACTACCCTTCAGGGGCTACCGCCGTTGCAATTGCAGCTACTTTGATTTGTGCGACGTGGACAGATTATAGT
CGTGTCCGTTGGCCTGTTTTGATATGCATGGCAACTGCATGCATTATCGCGGCTATATGTATTCTGGTCTGGAGT
AGCCCAATAGGTCTCAAGTTCTTTGCGTACTATATCGCGGGCGTTTCGTATGCAGGACAAGCTACCACCTTCGCG
TGGGCTAACGAGATATGTGCTGATGACGACCAAGAAAGGAGTGTTGTCTTGGCCTCCATGAACATGTGGAATAAT
GTGATCAACGCATGGTGGTCCATCGTCTTTTACCCAGCAACTGACGCACCGAAATTCACAAGGGGGATGATTGCC
ATGCTGTGCGTTAGCGTTGCTACCCTCGCTGTGACGTATTTAGTTTATTATCTGGAGCGGCGGGAACATCGGTAT
AGGCGAGAACCACAGCCCCCAAGTCCCGAGCTGGAGATGGACAAAGAAAAATAG
Gene >AgabiH97|071710
ATGGTGCGACCCAGTTTCATCAAACAAGTTCTACTGGGGCACACCCCCTCTACCCGGCAAGAGTCCAGGCTTTTG
CTAAAAATTGACTGGTTCATCTTGTCGTACTGTTGTTTGATGGTAGGCGCAATAAGGAGAGGTCAATCTCATTTC
TGATGTCACATTATCTTTCAGTACTTCACCAACTGTAATGCTCTTTTGATCCGTGAAGTCAAGCGCCAGGCTGAA
TTACCCCAGACTTGGATAGGTCGAACATCAATAATGCCTTCGTATCGGGAATGAAAGAAGACCTCAATATGTTTG
GAAAGGAAATAAACGTTGGGCTTTGGGCTGAACGTTATTCTATGGGTGGGACTGACTTCGGCCCGTAACAGAACA
TAAACACGATTTTCACTTGTGGTTATATTATCGGAATGATTCCCAGTAAGTCAGTAATGCAGATCACACATGACA
AATCTAATCGCCCCAATCCGAAGACAACATCATGTTGCAAGTCGTGTCACCACGCATTTGGTTACCTTCGATGCA
GATTGTTTGGGCAATTCTGACGTTCTGGTGAGTCAGAGATAATCAGAAGTCCCCATTGCCTAATCTTAGTCTTGC
AGCACCAGCGCAGTGCATAGGGTCGAGCAGGTAAGGTTATATATTTTCCTTGCTTGACGTCTTTTCAGGCTCTGG
AATATGATCACAGATATATGCAATTCGGTTTTTCCAAGGAATCGCTGAGTCATCGACGTTCGTCGGAGTGCACTA
CATCCTCGGCTCGTGAGTTGCCGCCTTCCGCTTTTGACCTTACTCGCCTGAGTCAATGCAGATGGTACAAATCGA
CCGAATTAGGCAAGCGTTCGGGTATCTTCACAAGTTCAGGACTTGTAGGAACCCTGTGAGTATCCCATCATACAG
GCTTCTTCACGAATTCGTTTATCGATCTTGCGTAGATTTTCCGGCATTTTACAAGCCGCGGTATATAAGTCGGTG
TTCTGACACAAATGATTCGGGCGATGTAATTCATTCGACCTTCTCTAGGCATCTCGACGGAGTATCCAGTCTTAG
CGGTTGGCGTTGGCTGTATGTCCATCCTCAATCTTTGAGTAGTCAGATTCTTGAGCTGAGTTCCAGGTTCATTGT
GGATGGAATAATCACAGTACCCATCGCAGTGTATGGATTTTTTATTTTCCCCGATTTTCCGCGGACGACGAAAGC
CTTTTACCTGACACAAGAGGTGAGCTATAATAAGTTGCAAAAAAAACTTCTAACGCATCCCGGGCAGGAGCGTGA
GTTAGCCTACACCAGACTACAAGGAGAAATACAAGTGGACCGGCCACCTCTAAGCTGGAACCTTACCCGCCGAAT
TCTCACTAGGTGGAGATGGTATGCTTGCAGTTTACTGGTAAGTCCAAGGTCCCTCTTTTGTTCAACAATTACGGA
GGATATGCCTAGTTCGCCATTTCTGGCGAGACGGAAAGTTTCGGTTCCAATAATCTGATGGGTCAATGGCTCAAA
GCTATCGGTGGATACACCATTGAACAGATAGGCTAGTTTGAACACACTCACACGTTCATCCCTATCAACATTAAC
TGATTCTCGCAGATTACTACCCTTCAGGGGCTACCGCCGTTGCAATTGCAGCTACTTTGATTTGTGCGACGTGGA
CAGATTATAGTCGTGTCCGTTGGCCTGTTTTGATATGCATGGCAACTGCATGCATTATCGCGGCTATATGTATTC
TGGTCTGGAGTAGCCCAATAGGTCTCAAGTTCTTTGCGTACTGTAAATCCCAGAAAGTCATCTGTGAAATTTCGT
CTGATTATCTTCAGATATCGCGGGCGTTTCGTATGCAGGACAAGCTACCACCTTCGCGTTCGCCTTCTTTCATTC
TACTGAAAGCTCCAACTGATCCTGTTTAGGTGGGCTAACGAGATATGTGCTGATGACGACCAAGAAAGGAGTGTT
GTCTTGGCCTCCATGAAGTAAGTGTTGCCACATATATTTTACTCCACCTTATCACTTTCGCCATCCGGCGAACCA
TTTTTGGAACCCCCCTATAAGACGCTGACTGAACATTTTTGTCAATTCGGTAGCATGTGGAATAATGTGATCAAC
GCATGGTGGTCCATCGTCTTTTACCCAGCAACTGACGCACCGAAATTCACAAGGGGGATGATTGCCATGCTGTGC
GTTAGCGTTGCTACCCTCGCTGTGACGTATTTAGTTTATTATCTGGAGCGGCGGGAACATCGGTATAGGCGAGAA
CCACAGCCCCCAAGTCCCGAGCTGGAGATGGACAAAGAAAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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