© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|071160 |
| Gene name | |
| Location | scaffold_4:1444291..1446019 |
| Strand | + |
| Gene length (bp) | 1728 |
| Transcript length (bp) | 1347 |
| Coding sequence length (bp) | 1347 |
| Protein length (aa) | 449 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.2E-24 | 9 | 350 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 5.6E-06 | 74 | 215 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 50 | 437 | 7.0E-51 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 50 | 427 | 5.0E-47 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 66 | 420 | 2.0E-46 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 76 | 443 | 6.0E-12 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 76 | 411 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0P5M9|MFS10_BOVIN | Major facilitator superfamily domain-containing protein 10 OS=Bos taurus GN=MFSD10 PE=2 SV=1 | 50 | 437 | 7.0E-51 |
| sp|Q9D2V8|MFS10_MOUSE | Major facilitator superfamily domain-containing protein 10 OS=Mus musculus GN=Mfsd10 PE=1 SV=1 | 50 | 427 | 5.0E-47 |
| sp|Q14728|MFS10_HUMAN | Major facilitator superfamily domain-containing protein 10 OS=Homo sapiens GN=MFSD10 PE=1 SV=1 | 66 | 420 | 2.0E-46 |
| sp|P02980|TCR2_ECOLX | Tetracycline resistance protein, class B OS=Escherichia coli GN=tetA PE=1 SV=1 | 76 | 443 | 6.0E-12 |
| sp|P51564|TCR8_PASMD | Tetracycline resistance protein, class H OS=Pasteurella multocida GN=tetA PE=3 SV=1 | 76 | 411 | 3.0E-10 |
| sp|P39843|BMR2_BACSU | Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168) GN=blt PE=3 SV=1 | 76 | 178 | 4.0E-09 |
| sp|Q6GIU7|NORA_STAAR | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MRSA252) GN=norA PE=3 SV=1 | 76 | 186 | 7.0E-09 |
| sp|Q6GBD5|NORA_STAAS | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MSSA476) GN=norA PE=3 SV=1 | 76 | 186 | 9.0E-09 |
| sp|P0A0J7|NORA_STAAU | Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA PE=3 SV=1 | 76 | 186 | 1.0E-08 |
| sp|Q8C0T7|MFSD9_MOUSE | Major facilitator superfamily domain-containing protein 9 OS=Mus musculus GN=Mfsd9 PE=2 SV=1 | 73 | 184 | 1.0E-08 |
| sp|P0A0J4|NORA_STAAM | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=norA PE=3 SV=1 | 76 | 186 | 1.0E-08 |
| sp|P0A0J5|NORA_STAAN | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain N315) GN=norA PE=3 SV=1 | 76 | 186 | 1.0E-08 |
| sp|P0A0J6|NORA_STAAW | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain MW2) GN=norA PE=3 SV=1 | 76 | 186 | 1.0E-08 |
| sp|Q5HHX4|NORA_STAAC | Quinolone resistance protein NorA OS=Staphylococcus aureus (strain COL) GN=norA PE=3 SV=1 | 76 | 186 | 1.0E-08 |
| sp|Q8NBP5|MFSD9_HUMAN | Major facilitator superfamily domain-containing protein 9 OS=Homo sapiens GN=MFSD9 PE=2 SV=2 | 76 | 184 | 5.0E-08 |
| sp|Q6GPQ3|MFSD8_XENLA | Major facilitator superfamily domain-containing protein 8 OS=Xenopus laevis GN=mfsd8 PE=2 SV=1 | 70 | 442 | 7.0E-08 |
| sp|P02982|TCR1_ECOLX | Tetracycline resistance protein, class A OS=Escherichia coli GN=tetA PE=3 SV=2 | 70 | 181 | 6.0E-07 |
| sp|P02981|TCR3_ECOLX | Tetracycline resistance protein, class C OS=Escherichia coli GN=tetA PE=1 SV=1 | 76 | 181 | 3.0E-06 |
| sp|P33733|TCR4_SALOR | Tetracycline resistance protein, class D OS=Salmonella ordonez GN=tetA PE=3 SV=1 | 70 | 181 | 4.0E-06 |
| sp|P70187|HIAT1_MOUSE | Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1 PE=2 SV=3 | 73 | 228 | 9.0E-06 |
| sp|Q96MC6|HIAT1_HUMAN | Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1 PE=2 SV=2 | 73 | 228 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 71 | 93 | 22 |
| 3 | 105 | 124 | 19 |
| 4 | 129 | 151 | 22 |
| 5 | 163 | 185 | 22 |
| 6 | 200 | 222 | 22 |
| 7 | 270 | 289 | 19 |
| 8 | 299 | 318 | 19 |
| 9 | 331 | 349 | 18 |
| 10 | 416 | 438 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|071160 MAKVETIVFLSLVLDLFAFTIPLPLFPRLIEWYTLRESSDPNGFLSLTLRSVSYLRSLLYIPGGQSKRWDVVLLG GLMGSAFSTLQFFVSPIIGSLSDKYGRKRILLITMIGNILSAVVWVKSTTFASFTLSRVIGGLSEGNVQLAIAIL SDVTTQAARSKALAHVGIAFAICFCIGPPIGAYFASRPPPPAFKQWGLELNIYAIPAALTLVLLLAETLFLIVAL PETRNTGGKAVTNAPSSKSTQISSRGSTATRLNNLKSLRKFHFQFLALFSGVEYTLTFLTFDLLDWNNTQNGKLI GSVGIISALVQGGYVRRAMSKVGEGVIAKRGVSSCVAALVFLAILPIYANKGADATVVNSLTAFASLQCDEPGID EATGKPVEEHPDLVKGKALGRFRSAGQLGRAIGPILACASYWTIGPSYTYAISALMMLSLSIAMKPLAMTKSV* |
| Coding | >AgabiH97|071160 ATGGCGAAGGTGGAGACCATCGTTTTTCTCTCACTCGTTCTCGATCTCTTTGCGTTCACAATCCCGTTGCCTTTG TTTCCACGCCTGATAGAATGGTATACCTTGCGAGAGAGCTCTGATCCCAATGGCTTCCTTTCTTTGACTTTGCGT TCTGTGTCGTATCTTAGAAGTTTGCTATACATTCCCGGTGGGCAGTCCAAACGATGGGATGTTGTACTTCTCGGG GGCCTTATGGGCTCTGCCTTCTCAACCCTCCAATTCTTCGTTTCCCCAATAATTGGCTCCCTTTCCGATAAATAT GGACGTAAACGCATTCTCCTCATAACAATGATTGGGAACATACTTTCTGCAGTTGTATGGGTGAAATCTACCACA TTTGCTTCGTTTACGCTTTCTCGCGTAATTGGAGGGCTGAGCGAAGGGAATGTCCAACTAGCTATTGCTATACTT TCCGATGTTACTACTCAGGCCGCAAGATCCAAAGCGCTCGCCCATGTCGGAATTGCCTTTGCCATCTGCTTCTGT ATTGGTCCCCCCATTGGCGCATATTTTGCATCGAGGCCTCCTCCCCCCGCTTTCAAGCAATGGGGTCTTGAGCTC AATATATACGCTATTCCTGCAGCGCTCACACTTGTGTTGTTGTTAGCTGAAACACTTTTCCTTATCGTTGCTCTC CCGGAAACGCGCAACACCGGTGGAAAAGCCGTAACGAACGCACCCTCTTCCAAGTCAACCCAAATAAGCTCTAGG GGCAGCACCGCTACTCGACTCAATAATCTCAAATCTTTACGCAAGTTCCATTTCCAATTCCTGGCCCTCTTTTCC GGTGTGGAATATACTCTCACTTTCCTCACTTTCGATCTGCTAGATTGGAATAATACACAAAACGGAAAACTCATC GGCTCGGTTGGTATCATCAGCGCTCTTGTACAGGGAGGTTACGTACGACGGGCTATGTCAAAGGTCGGGGAGGGT GTAATAGCGAAACGCGGCGTCTCCAGCTGCGTCGCAGCACTCGTGTTCTTGGCAATTTTACCCATCTACGCCAAC AAGGGTGCAGACGCCACTGTCGTTAATTCATTGACTGCCTTCGCCTCATTGCAGTGCGATGAGCCTGGCATAGAT GAGGCTACGGGTAAGCCCGTCGAGGAACATCCAGACCTGGTCAAAGGAAAAGCGCTAGGGCGTTTCCGCTCTGCT GGGCAACTAGGACGCGCCATCGGTCCTATCTTAGCTTGCGCATCGTATTGGACTATAGGACCTAGCTATACGTAT GCGATCTCTGCTCTGATGATGTTATCATTATCCATTGCTATGAAGCCACTCGCTATGACGAAATCTGTATAG |
| Transcript | >AgabiH97|071160 ATGGCGAAGGTGGAGACCATCGTTTTTCTCTCACTCGTTCTCGATCTCTTTGCGTTCACAATCCCGTTGCCTTTG TTTCCACGCCTGATAGAATGGTATACCTTGCGAGAGAGCTCTGATCCCAATGGCTTCCTTTCTTTGACTTTGCGT TCTGTGTCGTATCTTAGAAGTTTGCTATACATTCCCGGTGGGCAGTCCAAACGATGGGATGTTGTACTTCTCGGG GGCCTTATGGGCTCTGCCTTCTCAACCCTCCAATTCTTCGTTTCCCCAATAATTGGCTCCCTTTCCGATAAATAT GGACGTAAACGCATTCTCCTCATAACAATGATTGGGAACATACTTTCTGCAGTTGTATGGGTGAAATCTACCACA TTTGCTTCGTTTACGCTTTCTCGCGTAATTGGAGGGCTGAGCGAAGGGAATGTCCAACTAGCTATTGCTATACTT TCCGATGTTACTACTCAGGCCGCAAGATCCAAAGCGCTCGCCCATGTCGGAATTGCCTTTGCCATCTGCTTCTGT ATTGGTCCCCCCATTGGCGCATATTTTGCATCGAGGCCTCCTCCCCCCGCTTTCAAGCAATGGGGTCTTGAGCTC AATATATACGCTATTCCTGCAGCGCTCACACTTGTGTTGTTGTTAGCTGAAACACTTTTCCTTATCGTTGCTCTC CCGGAAACGCGCAACACCGGTGGAAAAGCCGTAACGAACGCACCCTCTTCCAAGTCAACCCAAATAAGCTCTAGG GGCAGCACCGCTACTCGACTCAATAATCTCAAATCTTTACGCAAGTTCCATTTCCAATTCCTGGCCCTCTTTTCC GGTGTGGAATATACTCTCACTTTCCTCACTTTCGATCTGCTAGATTGGAATAATACACAAAACGGAAAACTCATC GGCTCGGTTGGTATCATCAGCGCTCTTGTACAGGGAGGTTACGTACGACGGGCTATGTCAAAGGTCGGGGAGGGT GTAATAGCGAAACGCGGCGTCTCCAGCTGCGTCGCAGCACTCGTGTTCTTGGCAATTTTACCCATCTACGCCAAC AAGGGTGCAGACGCCACTGTCGTTAATTCATTGACTGCCTTCGCCTCATTGCAGTGCGATGAGCCTGGCATAGAT GAGGCTACGGGTAAGCCCGTCGAGGAACATCCAGACCTGGTCAAAGGAAAAGCGCTAGGGCGTTTCCGCTCTGCT GGGCAACTAGGACGCGCCATCGGTCCTATCTTAGCTTGCGCATCGTATTGGACTATAGGACCTAGCTATACGTAT GCGATCTCTGCTCTGATGATGTTATCATTATCCATTGCTATGAAGCCACTCGCTATGACGAAATCTGTATAG |
| Gene | >AgabiH97|071160 ATGGCGAAGGTGGAGACCATCGTTTTTCTCTCACTCGTTCTCGATCTCTTTGCGTTCACAATCCCGTTGCCTTTG TTTCCACGCCTGATAGAATGGTATACCTTGGTGCGTGTCATATATTCCGTGTGCTGGACGTGGCACTCACTGTTC CCTGTATGCAGCGAGAGAGCTCTGATCCCAATGGCTTCCTTTCTTTGACTTTGCGTTCTGTGTCGTATCTTAGAA GTTTGCTATACATTCCCGGTGGGCAGTCCAAACGATGGGATGTTGTACTTCTCGGGGGCCTTATGGGCTCTGCCT TCTCGTACGTGGCACTACCCCGTTGTTCAGTTAATTAAGTATTGAATTACGAATACAGAACCCTCCAATTCTTCG TTTCCCCAATAATTGGCTCCCTTTCCGATAAATATGGACGTAAACGCATTCTCCTCATAACAATGATTGGGAACA TACTTTCTGCAGTTGTGTAAGTCATCATCGCCTTATTCGGGTAAACGTATTAATGACGCTGATTGATTTATATCC AGATGGGTGAAATCTACCACATTTGCTTCGTTTACGCTTTCTCGCGTAATTGGAGGGCTGAGCGAAGGGAATGTC CAACTAGCTATGTAAGTGCAGATCGAAAATCTCTCTCATTATCATAATTAACTTCTCTCTCAGTGCTATACTTTC CGATGTTACTACTCAGGCCGCAAGATCCAAAGCGCTCGCCCATGTCGGAATTGCCTTTGCCATCTGCTTCTGTAT TGGTCCCCCCATTGGCGCATATTTTGCATCGAGGCCTCCTCCCCCCGCTTTCAAGCAATGGGGTCTTGAGCTCAA TATATACGCTATTCCTGCAGCGCTCACACTTGTGTTGTTGTTAGCTGAAACACTTTTCCTTATCGTTGCTCTCCC GGAAACGCGCAACACCGGTGGAAAAGCCGTAACGAACGCACCCTCTTCCAAGTCAACCCAAATAAGCTCTAGGGG CAGCACCGCTACTCGACTCAATAATCTCAAATCTTTACGCAAGTTCCATTTCCAATTCCTGGCCCTCTTTTCCGG TGTGGAATATACTCTCACTTTCCTCACTTTCGATCGTAAGAGCTTTCTTACCGTTATTTGACGCAATTGACTCAA GTTATACTGTAGTGCTAGATTGGAATAATACACAAAACGGAAAACTCATCGGCTCGGTTGGTATCATCAGCGCTC TTGTACAGGGAGGTTACGTACGACGGGCTATGTCAAAGGTCGGGGAGGGTGTAATAGCGAAACGCGGCGTCTCCA GCTGCGTCGCAGCACTCGTGTTCTTGGCAATTTTACCCATCTACGCCAACAAGGGTGCAGAGTACGTGGCGGTGA AACTGCTACAGGCAGCTGCTGTTTGCATGGCCTTCACTAGCGCCACTGTCGTTAATTCATTGACTGCCTTCGCCT CATTGCAGTGCGATGAGCCTGGCATAGATGAGGCTACGGGTAAGCCCGTCGAGGAACATCCAGACCTGGTCAAAG GAAAAGCGCTAGGGCGTTTCCGCTCTGCTGGGCAACTAGGACGCGCCATCGGTCCTATCTTAGGTATGTTCTTAT TCCCCATCGTTCTGATGGATTTTCTAAAAAGCATTTATAGCTTGCGCATCGTATTGGACTATAGGACCTAGCTAT ACGTATGCGATCTCTGCTCTGATGATGTTATCATTATCCATTGCTATGAAGCCACTCGCTATGACGAAATCTGTA TAG |