Fungal Genomics

General Properties

Protein ID	AgabiH97|071040
Gene name
Location	scaffold_4:1412576..1413879
Strand	-
Gene length (bp)	1303
Transcript length (bp)	1026
Coding sequence length (bp)	1026
Protein length (aa)	342

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	5.3E-09	11	84
PF05368	NmrA	NmrA-like family	4.4E-08	9	79

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q9Y7K4|YGI2_SCHPO	Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1	5	323	3.0E-13

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm		0.6793	0.3351	0.2087	0.0439	0.2537	0.0067	0.0215	0.1156	0.0821	0.0736

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	152
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|071030
Agaricus bisporus var bisporus H39	AgabiH39|071040
Agaricus bisporus var bisporus H39	AgabiH39|083920
Agaricus bisporus var bisporus H97	AgabiH97|071030
Agaricus bisporus var bisporus H97	AgabiH97|071040 (this protein)
Agaricus bisporus var bisporus H97	AgabiH97|083920
Rhodonia placenta FPRL280	RhoplFPRL280|233_5
Rhodonia placenta FPRL280	RhoplFPRL280|287_8
Rhodonia placenta FPRL280	RhoplFPRL280|335_4
Rhodonia placenta FPRL280	RhoplFPRL280|335_6
Rhodonia placenta FPRL280	RhoplFPRL280|335_7
Rhodonia placenta FPRL280	RhoplFPRL280|509_3
Rhodonia placenta FPRL280	RhoplFPRL280|594_2

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|071040 MSSTLKFFFIGATGYVGSSVLERFLDHPEANNFEFTALVRDPRKAEKLKQFGVNAVVGSFDDAKLVEDLTAAADI VVDMGGSDNLGLAKSTLRGFQRKFQETGKPSIFIHTSGTIIIADDATGLHSSDVVWNDADPDQIEQLPPTAPHID VELEIIRADKEGYVRAYFVTPGTIYGIASGKFVDAGLANKHSIQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIDLYNAIKANPDSVGHGRDGFYFLLNGEHSLYDVGKEIGRALVALGKVTTEVPSTYTQEEVNKYFGGSNF LGTNSRGLANHSKSIGWKPKKTTQDLMASIKPEVEEILKHL*
Coding	>AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTT GATCATCCGGAGGCCAATAATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAA TTCGGCGTAAACGCCGTTGTCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATC GTGGTTGACATGGGAGGCTCAGATAATCTCGGACTTGCCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAA GAAACAGGAAAACCTTCAATTTTTATTCACACCTCCGGAACCATCATCATAGCCGATGATGCAACGGGTCTTCAT TCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAACTGCACCCCATATCGAC GTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGACTCCCGGCACAATATAT GGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGG TTCTATTTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTC GGCAAGGTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGGATCTAATTTC TTGGGCACAAACTCGAGGGGTTTGGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGAT CTTATGGCGAGCATTAAGCCTGAAGTAGAGGAGATTCTCAAGCATTTGTAA
Transcript	>AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTT GATCATCCGGAGGCCAATAATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAA TTCGGCGTAAACGCCGTTGTCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATC GTGGTTGACATGGGAGGCTCAGATAATCTCGGACTTGCCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAA GAAACAGGAAAACCTTCAATTTTTATTCACACCTCCGGAACCATCATCATAGCCGATGATGCAACGGGTCTTCAT TCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAACTGCACCCCATATCGAC GTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGACTCCCGGCACAATATAT GGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGG TTCTATTTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTC GGCAAGGTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGGATCTAATTTC TTGGGCACAAACTCGAGGGGTTTGGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGAT CTTATGGCGAGCATTAAGCCTGAAGTAGAGGAGATTCTCAAGCATTTGTAA
Gene	>AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGTCAGCTCAAATTCACATTTCTTTGCAATAGTTCG TCTCAGACTAATCATCCTCAGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTTGATCATCCGGAGGCCAATA ATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAATTCGGCGTAAACGCCGTTG TCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATCGTGGTTGACATGGTTAGTT AGAATAATATTCATTCGTTTATAAGGTAGTCTTAAAAACCCATGCTTCAGGGAGGCTCAGATAATCTCGGACTTG CCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAAGAAACAGGAAAACCTTCAATTTTTATTCACACCGTAA GTCTTCGTGGATATCTATTTGGGGCTAGCCGTTCCTACTCAACTCTCCAGTCCGGAACCATCATCATAGCCGATG ATGCAACGGGTCTTCATTCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAA CTGCACCCCATATCGACGTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGA CTCCCGGCACAATATATGGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGG TACCTGCCCTCATCAAGACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAA ACGTTCATATTGATGAAGGTCAGCTCACTAACTCCCTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCC GATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGGTTCTAT TTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTCGGCAAG GTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGTGAGTTTTTATCATTCT TGGGCTCGTTGAGGACAGGTTGAACTTGACGTTTTCATAGGGATCTAATTTCTTGGGCACAAACTCGAGGGGTTT GGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGATCTTATGGCGAGCATTAAGCCTGA AGTAGAGGAGATTCTCAAGCATTTGTAA