Protein ID | AgabiH97|071040 |
Gene name | |
Location | scaffold_4:1412576..1413879 |
Strand | - |
Gene length (bp) | 1303 |
Transcript length (bp) | 1026 |
Coding sequence length (bp) | 1026 |
Protein length (aa) | 342 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13460 | NAD_binding_10 | NAD(P)H-binding | 5.3E-09 | 11 | 84 |
PF05368 | NmrA | NmrA-like family | 4.4E-08 | 9 | 79 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7K4|YGI2_SCHPO | Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 | 5 | 323 | 3.0E-13 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6793 | 0.3351 | 0.2087 | 0.0439 | 0.2537 | 0.0067 | 0.0215 | 0.1156 | 0.0821 | 0.0736 |
Orthofinder run ID | 1 |
Orthogroup | 152 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|071040 MSSTLKFFFIGATGYVGSSVLERFLDHPEANNFEFTALVRDPRKAEKLKQFGVNAVVGSFDDAKLVEDLTAAADI VVDMGGSDNLGLAKSTLRGFQRKFQETGKPSIFIHTSGTIIIADDATGLHSSDVVWNDADPDQIEQLPPTAPHID VELEIIRADKEGYVRAYFVTPGTIYGIASGKFVDAGLANKHSIQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIDLYNAIKANPDSVGHGRDGFYFLLNGEHSLYDVGKEIGRALVALGKVTTEVPSTYTQEEVNKYFGGSNF LGTNSRGLANHSKSIGWKPKKTTQDLMASIKPEVEEILKHL* |
Coding | >AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTT GATCATCCGGAGGCCAATAATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAA TTCGGCGTAAACGCCGTTGTCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATC GTGGTTGACATGGGAGGCTCAGATAATCTCGGACTTGCCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAA GAAACAGGAAAACCTTCAATTTTTATTCACACCTCCGGAACCATCATCATAGCCGATGATGCAACGGGTCTTCAT TCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAACTGCACCCCATATCGAC GTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGACTCCCGGCACAATATAT GGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGG TTCTATTTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTC GGCAAGGTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGGATCTAATTTC TTGGGCACAAACTCGAGGGGTTTGGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGAT CTTATGGCGAGCATTAAGCCTGAAGTAGAGGAGATTCTCAAGCATTTGTAA |
Transcript | >AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTT GATCATCCGGAGGCCAATAATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAA TTCGGCGTAAACGCCGTTGTCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATC GTGGTTGACATGGGAGGCTCAGATAATCTCGGACTTGCCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAA GAAACAGGAAAACCTTCAATTTTTATTCACACCTCCGGAACCATCATCATAGCCGATGATGCAACGGGTCTTCAT TCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAACTGCACCCCATATCGAC GTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGACTCCCGGCACAATATAT GGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGG TTCTATTTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTC GGCAAGGTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGGATCTAATTTC TTGGGCACAAACTCGAGGGGTTTGGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGAT CTTATGGCGAGCATTAAGCCTGAAGTAGAGGAGATTCTCAAGCATTTGTAA |
Gene | >AgabiH97|071040 ATGTCTTCTACCCTCAAATTCTTTTTCATCGGTGCTACTGGTCAGCTCAAATTCACATTTCTTTGCAATAGTTCG TCTCAGACTAATCATCCTCAGGCTACGTCGGCAGCTCTGTTCTAGAGCGCTTCCTTGATCATCCGGAGGCCAATA ATTTCGAATTTACTGCCCTTGTTAGAGACCCTCGGAAAGCGGAAAAATTGAAGCAATTCGGCGTAAACGCCGTTG TCGGTTCTTTTGATGATGCTAAGCTCGTCGAGGACTTGACTGCCGCTGCGGACATCGTGGTTGACATGGTTAGTT AGAATAATATTCATTCGTTTATAAGGTAGTCTTAAAAACCCATGCTTCAGGGAGGCTCAGATAATCTCGGACTTG CCAAAAGTACACTTCGCGGCTTCCAAAGAAAGTTCCAAGAAACAGGAAAACCTTCAATTTTTATTCACACCGTAA GTCTTCGTGGATATCTATTTGGGGCTAGCCGTTCCTACTCAACTCTCCAGTCCGGAACCATCATCATAGCCGATG ATGCAACGGGTCTTCATTCTTCTGATGTCGTCTGGAACGATGCCGATCCTGACCAGATAGAGCAACTGCCACCAA CTGCACCCCATATCGACGTAGAATTGGAGATCATCCGGGCCGATAAGGAGGGTTACGTTCGCGCTTACTTCGTGA CTCCCGGCACAATATATGGAATTGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTATTCAGG TACCTGCCCTCATCAAGACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAA ACGTTCATATTGATGAAGGTCAGCTCACTAACTCCCTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCC GATTTCTATATCGACCTTTATAACGCAATCAAAGCCAACCCTGACTCCGTTGGTCATGGCCGTGATGGGTTCTAT TTTCTGTTGAATGGAGAACACAGTCTCTACGATGTTGGCAAAGAGATCGGCCGCGCACTAGTTGCGCTCGGCAAG GTAACCACCGAAGTGCCTTCCACATACACCCAAGAAGAAGTGAATAAGTATTTTGGAGTGAGTTTTTATCATTCT TGGGCTCGTTGAGGACAGGTTGAACTTGACGTTTTCATAGGGATCTAATTTCTTGGGCACAAACTCGAGGGGTTT GGCCAATCACTCGAAATCCATCGGGTGGAAACCGAAGAAAACAACCCAAGATCTTATGGCGAGCATTAAGCCTGA AGTAGAGGAGATTCTCAAGCATTTGTAA |