© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|071030 |
| Gene name | |
| Location | scaffold_4:1409738..1411038 |
| Strand | - |
| Gene length (bp) | 1300 |
| Transcript length (bp) | 1032 |
| Coding sequence length (bp) | 1032 |
| Protein length (aa) | 344 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.2E-08 | 11 | 88 |
| PF05368 | NmrA | NmrA-like family | 2.4E-06 | 9 | 78 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7K4|YGI2_SCHPO | Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 | 5 | 323 | 6.0E-15 |
| sp|Q12177|YL056_YEAST | Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1 | 5 | 321 | 6.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
Expression values
| Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
|---|---|---|---|---|
| Casing | Casing mycelium | 18.31 | 9.36 | 27.25 |
| Initials | Initials knots | 19.09 | 9.83 | 28.36 |
| Pileal_Stipeal_center | Stage I stipe center | 10.04 | 4.75 | 15.32 |
| Pileal_Stipeal_shell | Stage I stipe shell | 11.24 | 5.40 | 17.07 |
| DIF_stipe_center | Stage II stipe center | 6.59 | 2.93 | 10.26 |
| DIF_stipe_shell | Stage II stipe shell | 9.08 | 4.15 | 14.01 |
| DIF_stipe_skin | Stage II stipe skin | 11.16 | 5.36 | 16.97 |
| DIF_cap_skin | Stage II cap skin | 10.63 | 5.03 | 16.22 |
| DIF_cap_tissue | Stage II cap tissue | 10.84 | 5.18 | 16.50 |
| DIF_gill_tissue | Stage II gill tissue | 11.06 | 5.30 | 16.82 |
| YFB_stipe_center | Young fruiting body stipe center | 6.87 | 2.83 | 10.91 |
| YFB_stipe_shell | Young fruiting body stipe shell | 7.18 | 3.23 | 11.13 |
| YFB_stipe_skin | Young fruiting body stipe skin | 10.10 | 4.78 | 15.43 |
| YFB_cap_skin | Young fruiting body cap skin | 12.15 | 5.84 | 18.45 |
| YFB_cap_tissue | Young fruiting body cap tissue | 7.62 | 3.44 | 11.81 |
| YFB_gill_tissue | Young fruiting body gill tissue | 12.37 | 5.95 | 18.79 |
| YFB_veil | Young fruiting body veil | 10.85 | 5.19 | 16.51 |
Differential expression
| Label1 | Label2 | Q-value | Significant difference |
|---|---|---|---|
| Casing | DIF_gill_tissue | 0.178449 | no |
| Casing | YFB_stipe_center | 0.006387 | yes |
| Casing | YFB_stipe_shell | 0.004548 | yes |
| Casing | YFB_stipe_skin | 0.085561 | no |
| Casing | YFB_cap_skin | 0.301454 | no |
| Casing | YFB_cap_tissue | 0.011350 | yes |
| Casing | YFB_gill_tissue | 0.335694 | no |
| Casing | YFB_veil | 0.146995 | no |
| Casing | Initials | 0.950227 | no |
| Casing | Pileal_Stipeal_center | 0.084360 | no |
| Casing | Pileal_Stipeal_shell | 0.194842 | no |
| Casing | DIF_stipe_center | 0.003365 | yes |
| Casing | DIF_stipe_shell | 0.045060 | yes |
| Casing | DIF_stipe_skin | 0.185817 | no |
| Casing | DIF_cap_skin | 0.129397 | no |
| Casing | DIF_cap_tissue | 0.148790 | no |
| DIF_gill_tissue | YFB_stipe_center | 0.252836 | no |
| DIF_gill_tissue | YFB_stipe_shell | 0.296112 | no |
| DIF_gill_tissue | YFB_stipe_skin | 0.886688 | no |
| DIF_gill_tissue | YFB_cap_skin | 0.884948 | no |
| DIF_gill_tissue | YFB_cap_tissue | 0.391346 | no |
| DIF_gill_tissue | YFB_gill_tissue | 0.857294 | no |
| DIF_gill_tissue | YFB_veil | 0.977425 | no |
| YFB_stipe_center | YFB_stipe_shell | 0.954369 | no |
| YFB_stipe_center | YFB_stipe_skin | 0.389617 | no |
| YFB_stipe_center | YFB_cap_skin | 0.146718 | no |
| YFB_stipe_center | YFB_cap_tissue | 0.880906 | no |
| YFB_stipe_center | YFB_gill_tissue | 0.134423 | no |
| YFB_stipe_center | YFB_veil | 0.280663 | no |
| YFB_stipe_shell | YFB_stipe_skin | 0.446415 | no |
| YFB_stipe_shell | YFB_cap_skin | 0.176925 | no |
| YFB_stipe_shell | YFB_cap_tissue | 0.932759 | no |
| YFB_stipe_shell | YFB_gill_tissue | 0.160642 | no |
| YFB_stipe_shell | YFB_veil | 0.326487 | no |
| YFB_stipe_skin | YFB_cap_skin | 0.737935 | no |
| YFB_stipe_skin | YFB_cap_tissue | 0.550741 | no |
| YFB_stipe_skin | YFB_gill_tissue | 0.703973 | no |
| YFB_stipe_skin | YFB_veil | 0.914925 | no |
| YFB_cap_skin | YFB_cap_tissue | 0.259163 | no |
| YFB_cap_skin | YFB_gill_tissue | 0.979767 | no |
| YFB_cap_skin | YFB_veil | 0.853344 | no |
| YFB_cap_tissue | YFB_gill_tissue | 0.227368 | no |
| YFB_cap_tissue | YFB_veil | 0.425535 | no |
| YFB_gill_tissue | YFB_veil | 0.825505 | no |
| Initials | DIF_gill_tissue | 0.133711 | no |
| Initials | YFB_stipe_center | 0.004548 | yes |
| Initials | YFB_stipe_shell | 0.003365 | yes |
| Initials | YFB_stipe_skin | 0.062420 | no |
| Initials | YFB_cap_skin | 0.237447 | no |
| Initials | YFB_cap_tissue | 0.008791 | yes |
| Initials | YFB_gill_tissue | 0.267262 | no |
| Initials | YFB_veil | 0.110080 | no |
| Initials | Pileal_Stipeal_center | 0.058347 | no |
| Initials | Pileal_Stipeal_shell | 0.146459 | no |
| Initials | DIF_stipe_center | 0.002084 | yes |
| Initials | DIF_stipe_shell | 0.031088 | yes |
| Initials | DIF_stipe_skin | 0.142789 | no |
| Initials | DIF_cap_skin | 0.096785 | no |
| Initials | DIF_cap_tissue | 0.109313 | no |
| Pileal_Stipeal_center | DIF_gill_tissue | 0.883186 | no |
| Pileal_Stipeal_center | YFB_stipe_center | 0.403226 | no |
| Pileal_Stipeal_center | YFB_stipe_shell | 0.460573 | no |
| Pileal_Stipeal_center | YFB_stipe_skin | 0.992693 | no |
| Pileal_Stipeal_center | YFB_cap_skin | 0.726186 | no |
| Pileal_Stipeal_center | YFB_cap_tissue | 0.567448 | no |
| Pileal_Stipeal_center | YFB_gill_tissue | 0.690708 | no |
| Pileal_Stipeal_center | YFB_veil | 0.907360 | no |
| Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.858398 | no |
| Pileal_Stipeal_center | DIF_stipe_center | 0.312315 | no |
| Pileal_Stipeal_center | DIF_stipe_shell | 0.879546 | no |
| Pileal_Stipeal_center | DIF_stipe_skin | 0.867760 | no |
| Pileal_Stipeal_center | DIF_cap_skin | 0.935243 | no |
| Pileal_Stipeal_center | DIF_cap_tissue | 0.910574 | no |
| Pileal_Stipeal_shell | DIF_gill_tissue | 0.982528 | no |
| Pileal_Stipeal_shell | YFB_stipe_center | 0.238109 | no |
| Pileal_Stipeal_shell | YFB_stipe_shell | 0.275633 | no |
| Pileal_Stipeal_shell | YFB_stipe_skin | 0.863152 | no |
| Pileal_Stipeal_shell | YFB_cap_skin | 0.906765 | no |
| Pileal_Stipeal_shell | YFB_cap_tissue | 0.374561 | no |
| Pileal_Stipeal_shell | YFB_gill_tissue | 0.881271 | no |
| Pileal_Stipeal_shell | YFB_veil | 0.960101 | no |
| Pileal_Stipeal_shell | DIF_stipe_center | 0.176804 | no |
| Pileal_Stipeal_shell | DIF_stipe_shell | 0.692868 | no |
| Pileal_Stipeal_shell | DIF_stipe_skin | 0.992027 | no |
| Pileal_Stipeal_shell | DIF_cap_skin | 0.936255 | no |
| Pileal_Stipeal_shell | DIF_cap_tissue | 0.960567 | no |
| DIF_stipe_center | DIF_gill_tissue | 0.191927 | no |
| DIF_stipe_center | YFB_stipe_center | 0.956720 | no |
| DIF_stipe_center | YFB_stipe_shell | 0.901038 | no |
| DIF_stipe_center | YFB_stipe_skin | 0.299255 | no |
| DIF_stipe_center | YFB_cap_skin | 0.101059 | no |
| DIF_stipe_center | YFB_cap_tissue | 0.812745 | no |
| DIF_stipe_center | YFB_gill_tissue | 0.092165 | no |
| DIF_stipe_center | YFB_veil | 0.206572 | no |
| DIF_stipe_center | DIF_stipe_shell | 0.503635 | no |
| DIF_stipe_center | DIF_stipe_skin | 0.180956 | no |
| DIF_stipe_center | DIF_cap_skin | 0.231862 | no |
| DIF_stipe_center | DIF_cap_tissue | 0.206807 | no |
| DIF_stipe_shell | DIF_gill_tissue | 0.723103 | no |
| DIF_stipe_shell | YFB_stipe_center | 0.593805 | no |
| DIF_stipe_shell | YFB_stipe_shell | 0.661676 | no |
| DIF_stipe_shell | YFB_stipe_skin | 0.867011 | no |
| DIF_stipe_shell | YFB_cap_skin | 0.548492 | no |
| DIF_stipe_shell | YFB_cap_tissue | 0.766526 | no |
| DIF_stipe_shell | YFB_gill_tissue | 0.514796 | no |
| DIF_stipe_shell | YFB_veil | 0.754872 | no |
| DIF_stipe_shell | DIF_stipe_skin | 0.704181 | no |
| DIF_stipe_shell | DIF_cap_skin | 0.789667 | no |
| DIF_stipe_shell | DIF_cap_tissue | 0.760720 | no |
| DIF_stipe_skin | DIF_gill_tissue | 0.989747 | no |
| DIF_stipe_skin | YFB_stipe_center | 0.242331 | no |
| DIF_stipe_skin | YFB_stipe_shell | 0.283951 | no |
| DIF_stipe_skin | YFB_stipe_skin | 0.873422 | no |
| DIF_stipe_skin | YFB_cap_skin | 0.898413 | no |
| DIF_stipe_skin | YFB_cap_tissue | 0.381638 | no |
| DIF_stipe_skin | YFB_gill_tissue | 0.872193 | no |
| DIF_stipe_skin | YFB_veil | 0.968104 | no |
| DIF_stipe_skin | DIF_cap_skin | 0.944399 | no |
| DIF_stipe_skin | DIF_cap_tissue | 0.968464 | no |
| DIF_cap_skin | DIF_gill_tissue | 0.954369 | no |
| DIF_cap_skin | YFB_stipe_center | 0.314347 | no |
| DIF_cap_skin | YFB_stipe_shell | 0.360945 | no |
| DIF_cap_skin | YFB_stipe_skin | 0.939640 | no |
| DIF_cap_skin | YFB_cap_skin | 0.822795 | no |
| DIF_cap_skin | YFB_cap_tissue | 0.462761 | no |
| DIF_cap_skin | YFB_gill_tissue | 0.794009 | no |
| DIF_cap_skin | YFB_veil | 0.976270 | no |
| DIF_cap_skin | DIF_cap_tissue | 0.976976 | no |
| DIF_cap_tissue | DIF_gill_tissue | 0.978871 | no |
| DIF_cap_tissue | YFB_stipe_center | 0.282209 | no |
| DIF_cap_tissue | YFB_stipe_shell | 0.328346 | no |
| DIF_cap_tissue | YFB_stipe_skin | 0.913644 | no |
| DIF_cap_tissue | YFB_cap_skin | 0.854657 | no |
| DIF_cap_tissue | YFB_cap_tissue | 0.424649 | no |
| DIF_cap_tissue | YFB_gill_tissue | 0.824310 | no |
| DIF_cap_tissue | YFB_veil | 0.998514 | no |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|071030 MSPTLKFFFVGATGYIGSSVLERFLDHPDASNFEFTALVRDPRKAEKFKPFGINATVGSFDDAQLVEDLTAAADV VVDAGNADDLGLTKSMLRGFKRGFQKTGKPSTFIHTSGTGVLIDDAAGLRTTDVIWNDADPDQIEQLPPTAPHRD VDLEILQADKEGYVRAYFVLPSTIYGMASGKFVDAGLANKHSVQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIELFNAIKANPDAVGHGRDGFYILLNGEHTLYDVSKEIGRALVALGKATTEVPSTYTQEEVNKYFGGLNY LGTNSRGLANHSRSIGWKPKKTTQDFLASIGPEVEEIAKSKHL* |
| Coding | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA |
| Transcript | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA |
| Gene | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGTCAGCTTAAATCCACATTTCTTTGCATGAGTTCA TCTCAGACCATCATCTTCAGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTCGATCATCCGGACGCCAGTAA CTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCATTCGGCATAAATGCTACTGT CGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTTGTCGTAGACGCAGTATGTCA GAAAATCTTGGATTAGATTCATTAAACATACGTGCTTCAGGGAAATGCAGATGATCTTGGACTCACCAAAAGTAT GCTTCGCGGCTTCAAAAGAGGGTTCCAAAAAACTGGGAAACCTTCGACCTTTATTCACACCGTGAGTCTTCGTGC ATATCTACTTAGAGCTAGCTAACTTCAACTCAACTTTCTAGTCCGGAACCGGCGTCTTAATTGATGATGCTGCGG GCCTTCGTACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCC ATCGTGACGTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTA CAATATATGGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCC TCATCAAGACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATA TTGATGAAGGTCAGCTCACTGACTCCTTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCCGATTTCTAT ATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGTTTTTATATTCTGTTG AATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTTGGAAAGGCGACCACC GAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGTGAGTTTTGATCATTCTTGGGCTCAT TGAGGGCGGGTCGAACCTGACGTCTCCATAGGGTTTAAATTACTTGGGCACAAACTCGAGGGGGTTGGCCAATCA TTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGACTTTTTAGCGAGCATCGGGCCTGAAGTAGAGGA GATTGCCAAATCAAAGCATTTGTAA |