Protein ID | AgabiH97|071030 |
Gene name | |
Location | scaffold_4:1409738..1411038 |
Strand | - |
Gene length (bp) | 1300 |
Transcript length (bp) | 1032 |
Coding sequence length (bp) | 1032 |
Protein length (aa) | 344 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.2E-08 | 11 | 88 |
PF05368 | NmrA | NmrA-like family | 2.4E-06 | 9 | 78 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9Y7K4|YGI2_SCHPO | Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 | 5 | 323 | 6.0E-15 |
sp|Q12177|YL056_YEAST | Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1 | 5 | 321 | 6.0E-07 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6615 | 0.3395 | 0.295 | 0.0492 | 0.274 | 0.0071 | 0.0219 | 0.0969 | 0.1614 | 0.1278 |
Orthofinder run ID | 1 |
Orthogroup | 152 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|071030 MSPTLKFFFVGATGYIGSSVLERFLDHPDASNFEFTALVRDPRKAEKFKPFGINATVGSFDDAQLVEDLTAAADV VVDAGNADDLGLTKSMLRGFKRGFQKTGKPSTFIHTSGTGVLIDDAAGLRTTDVIWNDADPDQIEQLPPTAPHRD VDLEILQADKEGYVRAYFVLPSTIYGMASGKFVDAGLANKHSVQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIELFNAIKANPDAVGHGRDGFYILLNGEHTLYDVSKEIGRALVALGKATTEVPSTYTQEEVNKYFGGLNY LGTNSRGLANHSRSIGWKPKKTTQDFLASIGPEVEEIAKSKHL* |
Coding | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA |
Transcript | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA |
Gene | >AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGTCAGCTTAAATCCACATTTCTTTGCATGAGTTCA TCTCAGACCATCATCTTCAGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTCGATCATCCGGACGCCAGTAA CTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCATTCGGCATAAATGCTACTGT CGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTTGTCGTAGACGCAGTATGTCA GAAAATCTTGGATTAGATTCATTAAACATACGTGCTTCAGGGAAATGCAGATGATCTTGGACTCACCAAAAGTAT GCTTCGCGGCTTCAAAAGAGGGTTCCAAAAAACTGGGAAACCTTCGACCTTTATTCACACCGTGAGTCTTCGTGC ATATCTACTTAGAGCTAGCTAACTTCAACTCAACTTTCTAGTCCGGAACCGGCGTCTTAATTGATGATGCTGCGG GCCTTCGTACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCC ATCGTGACGTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTA CAATATATGGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCC TCATCAAGACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATA TTGATGAAGGTCAGCTCACTGACTCCTTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCCGATTTCTAT ATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGTTTTTATATTCTGTTG AATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTTGGAAAGGCGACCACC GAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGTGAGTTTTGATCATTCTTGGGCTCAT TGAGGGCGGGTCGAACCTGACGTCTCCATAGGGTTTAAATTACTTGGGCACAAACTCGAGGGGGTTGGCCAATCA TTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGACTTTTTAGCGAGCATCGGGCCTGAAGTAGAGGA GATTGCCAAATCAAAGCATTTGTAA |