Fungal Genomics

General Properties

Protein ID	AgabiH97|071030
Gene name
Location	scaffold_4:1409738..1411038
Strand	-
Gene length (bp)	1300
Transcript length (bp)	1032
Coding sequence length (bp)	1032
Protein length (aa)	344

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	1.2E-08	11	88
PF05368	NmrA	NmrA-like family	2.4E-06	9	78

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp|Q9Y7K4|YGI2_SCHPO	Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1	5	323	6.0E-15
sp|Q12177|YL056_YEAST	Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1	5	321	6.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm		0.6615	0.3395	0.295	0.0492	0.274	0.0071	0.0219	0.0969	0.1614	0.1278

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Orthologs

Orthofinder run ID	1
Orthogroup	152
Change Orthofinder run	1: Agaricomycetes 5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|071030
Agaricus bisporus var bisporus H39	AgabiH39|071040
Agaricus bisporus var bisporus H39	AgabiH39|083920
Agaricus bisporus var bisporus H97	AgabiH97|071030 (this protein)
Agaricus bisporus var bisporus H97	AgabiH97|071040
Agaricus bisporus var bisporus H97	AgabiH97|083920
Rhodonia placenta FPRL280	RhoplFPRL280|233_5
Rhodonia placenta FPRL280	RhoplFPRL280|287_8
Rhodonia placenta FPRL280	RhoplFPRL280|335_4
Rhodonia placenta FPRL280	RhoplFPRL280|335_6
Rhodonia placenta FPRL280	RhoplFPRL280|335_7
Rhodonia placenta FPRL280	RhoplFPRL280|509_3
Rhodonia placenta FPRL280	RhoplFPRL280|594_2

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>AgabiH97|071030 MSPTLKFFFVGATGYIGSSVLERFLDHPDASNFEFTALVRDPRKAEKFKPFGINATVGSFDDAQLVEDLTAAADV VVDAGNADDLGLTKSMLRGFKRGFQKTGKPSTFIHTSGTGVLIDDAAGLRTTDVIWNDADPDQIEQLPPTAPHRD VDLEILQADKEGYVRAYFVLPSTIYGMASGKFVDAGLANKHSVQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIELFNAIKANPDAVGHGRDGFYILLNGEHTLYDVSKEIGRALVALGKATTEVPSTYTQEEVNKYFGGLNY LGTNSRGLANHSRSIGWKPKKTTQDFLASIGPEVEEIAKSKHL*
Coding	>AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA
Transcript	>AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACCTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGT ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGGTTTAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCCAAATCAAAGCATTTGTAA
Gene	>AgabiH97|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGTCAGCTTAAATCCACATTTCTTTGCATGAGTTCA TCTCAGACCATCATCTTCAGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTCGATCATCCGGACGCCAGTAA CTTTGAGTTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAGTTCAAGCCATTCGGCATAAATGCTACTGT CGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTTGTCGTAGACGCAGTATGTCA GAAAATCTTGGATTAGATTCATTAAACATACGTGCTTCAGGGAAATGCAGATGATCTTGGACTCACCAAAAGTAT GCTTCGCGGCTTCAAAAGAGGGTTCCAAAAAACTGGGAAACCTTCGACCTTTATTCACACCGTGAGTCTTCGTGC ATATCTACTTAGAGCTAGCTAACTTCAACTCAACTTTCTAGTCCGGAACCGGCGTCTTAATTGATGATGCTGCGG GCCTTCGTACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACTGCACCCC ATCGTGACGTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTA CAATATATGGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCC TCATCAAGACCTCGCTTGACAGAGGACAGGCTGGGATGATCGGTAAGGGATTGAACATCTGGCCAAACGTTCATA TTGATGAAGGTCAGCTCACTGACTCCTTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCCGATTTCTAT ATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGACGGTTTTTATATTCTGTTG AATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTTGGAAAGGCGACCACC GAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTCGGAGTGAGTTTTGATCATTCTTGGGCTCAT TGAGGGCGGGTCGAACCTGACGTCTCCATAGGGTTTAAATTACTTGGGCACAAACTCGAGGGGGTTGGCCAATCA TTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGACTTTTTAGCGAGCATCGGGCCTGAAGTAGAGGA GATTGCCAAATCAAAGCATTTGTAA