Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|069420
Gene name
Locationscaffold_4:1044373..1045443
Strand+
Gene length (bp)1070
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 2.4E-11 38 196
PF13649 Methyltransf_25 Methyltransferase domain 2.1E-10 45 139
PF13847 Methyltransf_31 Methyltransferase domain 1.2E-06 43 162
PF08241 Methyltransf_11 Methyltransferase domain 2.5E-06 46 141
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 1.1E-04 36 155

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6468 0.5163 0.1994 0.0399 0.0985 0.0093 0.1302 0.1668 0.2971 0.1197

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Orthologs

Orthofinder run ID1
Orthogroup288
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|023670
Agaricus bisporus var bisporus H39 AgabiH39|030510
Agaricus bisporus var bisporus H39 AgabiH39|062930
Agaricus bisporus var bisporus H39 AgabiH39|062940
Agaricus bisporus var bisporus H39 AgabiH39|062950
Agaricus bisporus var bisporus H39 AgabiH39|062970
Agaricus bisporus var bisporus H39 AgabiH39|062990
Agaricus bisporus var bisporus H39 AgabiH39|069420
Agaricus bisporus var bisporus H39 AgabiH39|294900
Agaricus bisporus var bisporus H39 AgabiH39|387000
Agaricus bisporus var bisporus H97 AgabiH97|069430
Agaricus bisporus var bisporus H97 AgabiH97|069420 (this protein)
Agaricus bisporus var bisporus H97 AgabiH97|062990
Agaricus bisporus var bisporus H97 AgabiH97|062970
Agaricus bisporus var bisporus H97 AgabiH97|062960
Agaricus bisporus var bisporus H97 AgabiH97|023670
Agaricus bisporus var bisporus H97 AgabiH97|062940
Agaricus bisporus var bisporus H97 AgabiH97|062930
Agaricus bisporus var bisporus H97 AgabiH97|030510
Agaricus bisporus var bisporus H97 AgabiH97|096710
Agaricus bisporus var bisporus H97 AgabiH97|062950
Rhodonia placenta FPRL280 RhoplFPRL280|71_4

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|069420
MPKTTGQRDIMSLMAPNLTNSSIVSQRTNRNENVLIFRAKCGAVVLDSGTGSGHWLLSLAKEVPSTVVLRGIDIS
PRMFPSPTTIPDNMSLMSHSITSLPEDWNNTVTLIHQRLLVAAFQADQWKTAVSEMYRVLAPGGWVQLFEPREQL
LSPLEAITNHKTLRILERLMADTRHIVNDVVDHLQHWLEETGFVNLTIQKRGMPIGSWAGERGVLSMEATLGAFE
AMKPLVLKEGGLGIVSSEEEFDAALADLRQLCDDTPDTYFQYWLFTAQKPLPKV*
Coding >AgabiH97|069420
ATGCCGAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCC
CAGCGGACGAACAGGAACGAGAACGTCTTGATCTTCAGAGCGAAATGTGGAGCCGTCGTCCTCGATAGTGGAACT
GGCTCAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACATCAGT
CCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTCTGCCA
GAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAATGGAAG
ACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAACAGCTC
CTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCAGGCAT
ATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCCAGAAA
CGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCATTTGAA
GCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAGCGTTG
GCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAAAACCT
CTGCCTAAAGTGTAA
Transcript >AgabiH97|069420
ATGCCGAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCC
CAGCGGACGAACAGGAACGAGAACGTCTTGATCTTCAGAGCGAAATGTGGAGCCGTCGTCCTCGATAGTGGAACT
GGCTCAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACATCAGT
CCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTCTGCCA
GAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAATGGAAG
ACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAACAGCTC
CTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCAGGCAT
ATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCCAGAAA
CGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCATTTGAA
GCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAGCGTTG
GCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAAAACCT
CTGCCTAAAGTGTAA
Gene >AgabiH97|069420
ATGCCGGTAAGTTCCATTTACCCAGCCTTGAGGCCCATGTCACCTACATCCACAGCTCATACTATGCCTTCCTCA
GAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCCCAGCG
GACGAACAGGAACGAGAACGGTAAGACTTTGCAATGATGAGAGTCCGTCACTGACTCATTTCTCTCATTGCTCAG
TCTTGATCTTCAGAGCGAAATGGTCAATCTGACGTTCGAAAACAAATTAATTTGGGCACCAGTCACACTTGAAAG
TGGAGCCGTCGTCCTCGATAGTGGAACTGGCTCAGGTATTTCAAGGATAACTTGAAGCACATTTTCGAAGTAGTA
ACAAAATTTTAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACA
TCAGTCCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTC
TGCCAGAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAAT
GGAAGACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAAC
AGCTCCTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCA
GGCATATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCC
AGAAACGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCAT
TTGAAGCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAG
CGTTGGCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAA
AACCTCTGCCTAAAGTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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