Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|069420
Gene name
Locationscaffold_4:1044373..1045443
Strand+
Gene length (bp)1070
Transcript length (bp)840
Coding sequence length (bp)840
Protein length (aa) 280

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 2.4E-11 38 196
PF13649 Methyltransf_25 Methyltransferase domain 2.1E-10 45 139
PF13847 Methyltransf_31 Methyltransferase domain 1.2E-06 43 162
PF08241 Methyltransf_11 Methyltransferase domain 2.5E-06 46 141
PF01209 Ubie_methyltran ubiE/COQ5 methyltransferase family 1.1E-04 36 155

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0016740 transferase activity No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|069420
MPKTTGQRDIMSLMAPNLTNSSIVSQRTNRNENVLIFRAKCGAVVLDSGTGSGHWLLSLAKEVPSTVVLRGIDIS
PRMFPSPTTIPDNMSLMSHSITSLPEDWNNTVTLIHQRLLVAAFQADQWKTAVSEMYRVLAPGGWVQLFEPREQL
LSPLEAITNHKTLRILERLMADTRHIVNDVVDHLQHWLEETGFVNLTIQKRGMPIGSWAGERGVLSMEATLGAFE
AMKPLVLKEGGLGIVSSEEEFDAALADLRQLCDDTPDTYFQYWLFTAQKPLPKV*
Coding >AgabiH97|069420
ATGCCGAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCC
CAGCGGACGAACAGGAACGAGAACGTCTTGATCTTCAGAGCGAAATGTGGAGCCGTCGTCCTCGATAGTGGAACT
GGCTCAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACATCAGT
CCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTCTGCCA
GAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAATGGAAG
ACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAACAGCTC
CTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCAGGCAT
ATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCCAGAAA
CGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCATTTGAA
GCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAGCGTTG
GCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAAAACCT
CTGCCTAAAGTGTAA
Transcript >AgabiH97|069420
ATGCCGAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCC
CAGCGGACGAACAGGAACGAGAACGTCTTGATCTTCAGAGCGAAATGTGGAGCCGTCGTCCTCGATAGTGGAACT
GGCTCAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACATCAGT
CCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTCTGCCA
GAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAATGGAAG
ACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAACAGCTC
CTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCAGGCAT
ATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCCAGAAA
CGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCATTTGAA
GCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAGCGTTG
GCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAAAACCT
CTGCCTAAAGTGTAA
Gene >AgabiH97|069420
ATGCCGGTAAGTTCCATTTACCCAGCCTTGAGGCCCATGTCACCTACATCCACAGCTCATACTATGCCTTCCTCA
GAAAACAACGGGACAGAGAGATATTATGTCTCTGATGGCTCCGAATCTAACAAATTCAAGTATTGTCTCCCAGCG
GACGAACAGGAACGAGAACGGTAAGACTTTGCAATGATGAGAGTCCGTCACTGACTCATTTCTCTCATTGCTCAG
TCTTGATCTTCAGAGCGAAATGGTCAATCTGACGTTCGAAAACAAATTAATTTGGGCACCAGTCACACTTGAAAG
TGGAGCCGTCGTCCTCGATAGTGGAACTGGCTCAGGTATTTCAAGGATAACTTGAAGCACATTTTCGAAGTAGTA
ACAAAATTTTAGGTCACTGGTTACTGAGCCTCGCTAAAGAGGTGCCCTCAACAGTCGTTCTCCGTGGAATCGACA
TCAGTCCTCGAATGTTCCCATCACCCACAACGATCCCCGATAATATGTCCCTGATGTCACATTCAATAACTTCTC
TGCCAGAGGATTGGAATAATACCGTGACGCTCATCCACCAACGCCTTTTGGTTGCCGCATTTCAAGCCGACCAAT
GGAAGACGGCGGTATCCGAAATGTACAGAGTTCTCGCACCCGGTGGATGGGTTCAACTTTTCGAACCAAGAGAAC
AGCTCCTTTCACCCCTCGAGGCTATCACCAATCACAAGACTCTGCGTATTTTGGAAAGACTTATGGCGGATACCA
GGCATATAGTCAATGACGTTGTTGATCACCTTCAACACTGGCTCGAAGAAACCGGCTTTGTTAATCTAACCATCC
AGAAACGGGGAATGCCAATCGGATCGTGGGCAGGAGAGCGTGGTGTTTTGAGCATGGAAGCCACTCTGGGGGCAT
TTGAAGCTATGAAACCGCTCGTCTTAAAGGAGGGTGGCCTTGGTATCGTATCTAGTGAGGAGGAGTTTGATGCAG
CGTTGGCAGACCTCAGGCAACTTTGCGACGACACACCAGACACGTACTTCCAGTATTGGTTATTTACGGCACAAA
AACCTCTGCCTAAAGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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