Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|069290
Gene name
Locationscaffold_4:1010593..1012222
Strand+
Gene length (bp)1629
Transcript length (bp)1569
Coding sequence length (bp)1569
Protein length (aa) 523

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.5

Transmembrane Domains

Domain # Start End Length
1 242 264 22
2 399 421 22
3 431 450 19
4 471 493 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|069290
MLLFLFTLAFIRQLEGAPIASYSTDTLSTMPFLLFTRTDTEPCAPIDHRSIWDIVWGCLVTIFICTWIAIHPNIP
ARTDSPWCVFKRGLLTTIHALIAPELILVWALHQYLGARQIKHSYNKDVLHCQPTRIAYYLRVLNYIKNWFQGEC
DVPDDVGWTKTHGFFIQMGGFMLYRDGLPVEVLTYKRFKKLIDRQEIDIPKITKRTINDKSKSDNFSKGFAVIQT
TWFVVQCIARWVRSLPLVELEVVTLAFAVLNAITYALWLSKPQNVQEAIRIDHLKPDSDIEMLELSSHSVSRPIE
HLPPNSQRPNPSDNRQSNNRQSWLHKHISKDFKRFKELRYGRLWFVIYRIPYRLVASAFRPMMKLLGSPEYGPLN
ESPGGPFLRVSMFSYEITEDLDPELILICLSCLIGASFGLLHVIAWNSGPTDLEQQLWRCSTLVIMIEPLLFIFT
NRVAKLAQGARSRLWNRIGDVILMLTGLPFMIGLPLYTFARVVLLIKAFVSLRQLPPAAYCDVDWSSFIPHI*
Coding >AgabiH97|069290
ATGCTGCTCTTCCTGTTCACGTTAGCCTTCATACGGCAGCTTGAAGGAGCTCCCATTGCGAGTTATTCTACGGAC
ACTCTTTCGACAATGCCTTTCCTACTCTTCACTCGCACAGACACTGAACCATGTGCGCCGATTGATCACAGGTCG
ATCTGGGACATAGTCTGGGGCTGTCTCGTCACCATTTTTATTTGCACATGGATTGCTATTCACCCAAACATACCT
GCCCGAACTGATTCCCCTTGGTGTGTTTTCAAGCGGGGATTATTGACCACGATCCATGCCCTCATAGCCCCAGAA
CTTATATTGGTTTGGGCGCTACACCAGTATCTGGGTGCCCGACAAATTAAGCACAGTTATAACAAGGACGTTCTG
CATTGTCAACCAACGCGTATCGCTTATTATCTGCGAGTGCTAAATTATATCAAGAACTGGTTTCAGGGGGAGTGC
GATGTGCCTGACGATGTCGGGTGGACGAAAACACATGGATTCTTCATTCAAATGGGAGGTTTTATGCTATACAGG
GATGGATTACCTGTCGAAGTCCTCACATACAAGAGGTTCAAAAAACTTATTGACAGACAAGAAATCGACATACCG
AAGATCACCAAACGAACGATCAACGACAAGAGCAAAAGCGACAATTTCTCAAAAGGATTCGCCGTCATACAAACG
ACCTGGTTCGTGGTTCAGTGTATAGCCCGTTGGGTGAGATCTCTTCCCTTGGTGGAGTTAGAGGTTGTAACGCTT
GCCTTCGCCGTTTTGAATGCCATCACATACGCCCTATGGCTCAGCAAGCCTCAGAATGTCCAGGAGGCGATCAGG
ATTGATCATCTAAAACCCGACAGCGACATCGAAATGCTGGAACTCTCATCTCACTCCGTTTCCCGCCCTATTGAA
CATCTCCCGCCAAACTCCCAGCGGCCCAACCCATCCGATAACAGGCAGTCCAATAACAGGCAGAGCTGGTTGCAC
AAACATATAAGTAAAGACTTCAAACGATTCAAGGAGTTGAGGTACGGGCGTCTGTGGTTCGTAATATACCGCATC
CCATACCGCCTCGTTGCATCAGCATTCCGCCCTATGATGAAGCTTTTGGGGTCGCCCGAATACGGACCGCTGAAC
GAATCGCCGGGCGGACCTTTCCTGCGCGTATCGATGTTCAGCTACGAAATTACGGAAGACCTTGATCCAGAGTTG
ATATTAATATGCCTTAGTTGCCTCATCGGAGCATCATTCGGGCTGCTACACGTCATTGCTTGGAATTCCGGGCCT
ACCGACCTCGAGCAACAACTTTGGAGATGCTCGACCCTCGTGATCATGATCGAACCTTTGCTTTTCATATTCACA
AATCGTGTAGCCAAATTAGCACAAGGTGCTAGAAGCCGCTTATGGAATCGTATTGGAGATGTTATTCTAATGCTG
ACTGGCTTACCTTTCATGATTGGTCTCCCTCTTTATACGTTTGCGCGCGTTGTACTTTTAATAAAAGCGTTTGTT
TCCCTTAGGCAATTGCCTCCAGCAGCGTACTGCGACGTTGACTGGAGTTCGTTTATTCCTCACATTTGA
Transcript >AgabiH97|069290
ATGCTGCTCTTCCTGTTCACGTTAGCCTTCATACGGCAGCTTGAAGGAGCTCCCATTGCGAGTTATTCTACGGAC
ACTCTTTCGACAATGCCTTTCCTACTCTTCACTCGCACAGACACTGAACCATGTGCGCCGATTGATCACAGGTCG
ATCTGGGACATAGTCTGGGGCTGTCTCGTCACCATTTTTATTTGCACATGGATTGCTATTCACCCAAACATACCT
GCCCGAACTGATTCCCCTTGGTGTGTTTTCAAGCGGGGATTATTGACCACGATCCATGCCCTCATAGCCCCAGAA
CTTATATTGGTTTGGGCGCTACACCAGTATCTGGGTGCCCGACAAATTAAGCACAGTTATAACAAGGACGTTCTG
CATTGTCAACCAACGCGTATCGCTTATTATCTGCGAGTGCTAAATTATATCAAGAACTGGTTTCAGGGGGAGTGC
GATGTGCCTGACGATGTCGGGTGGACGAAAACACATGGATTCTTCATTCAAATGGGAGGTTTTATGCTATACAGG
GATGGATTACCTGTCGAAGTCCTCACATACAAGAGGTTCAAAAAACTTATTGACAGACAAGAAATCGACATACCG
AAGATCACCAAACGAACGATCAACGACAAGAGCAAAAGCGACAATTTCTCAAAAGGATTCGCCGTCATACAAACG
ACCTGGTTCGTGGTTCAGTGTATAGCCCGTTGGGTGAGATCTCTTCCCTTGGTGGAGTTAGAGGTTGTAACGCTT
GCCTTCGCCGTTTTGAATGCCATCACATACGCCCTATGGCTCAGCAAGCCTCAGAATGTCCAGGAGGCGATCAGG
ATTGATCATCTAAAACCCGACAGCGACATCGAAATGCTGGAACTCTCATCTCACTCCGTTTCCCGCCCTATTGAA
CATCTCCCGCCAAACTCCCAGCGGCCCAACCCATCCGATAACAGGCAGTCCAATAACAGGCAGAGCTGGTTGCAC
AAACATATAAGTAAAGACTTCAAACGATTCAAGGAGTTGAGGTACGGGCGTCTGTGGTTCGTAATATACCGCATC
CCATACCGCCTCGTTGCATCAGCATTCCGCCCTATGATGAAGCTTTTGGGGTCGCCCGAATACGGACCGCTGAAC
GAATCGCCGGGCGGACCTTTCCTGCGCGTATCGATGTTCAGCTACGAAATTACGGAAGACCTTGATCCAGAGTTG
ATATTAATATGCCTTAGTTGCCTCATCGGAGCATCATTCGGGCTGCTACACGTCATTGCTTGGAATTCCGGGCCT
ACCGACCTCGAGCAACAACTTTGGAGATGCTCGACCCTCGTGATCATGATCGAACCTTTGCTTTTCATATTCACA
AATCGTGTAGCCAAATTAGCACAAGGTGCTAGAAGCCGCTTATGGAATCGTATTGGAGATGTTATTCTAATGCTG
ACTGGCTTACCTTTCATGATTGGTCTCCCTCTTTATACGTTTGCGCGCGTTGTACTTTTAATAAAAGCGTTTGTT
TCCCTTAGGCAATTGCCTCCAGCAGCGTACTGCGACGTTGACTGGAGTTCGTTTATTCCTCACATTTGA
Gene >AgabiH97|069290
ATGCTGCTCTTCCTGTTCACGTTAGCCTTCATACGGCAGCTTGAAGGAGCTCCCATTGCGAGTTATTCTACGGAC
ACTCTTTCGACAATGCCTTTCCTACTCTTCACTCGCACAGACACTGAACCATGTGCGCCGATTGATCACAGGTCG
ATCTGGGACATAGTCTGGGGCTGTCTCGTCACCATTTTTATTTGCACATGGATTGCTATTCACCCAAACATACCT
GCCCGAACTGATTCCCCTTGGTGTGTTTTCAAGCGGGGATTATTGACCACGATCCATGCCCTCATAGCCCCAGAA
CTTATATTGGTTTGGGCGCTACACCAGTATCTGGGTGCCCGACAAATTAAGCACAGTTATAACAAGGACGTTCTG
CATTGTACGTAAAAGCTTTTCGTTCACGTTTGCTTTCGCTTACGGCTTTATCACCATACTCTAGGTCAACCAACG
CGTATCGCTTATTATCTGCGAGTGCTAAATTATATCAAGAACTGGTTTCAGGGGGAGTGCGATGTGCCTGACGAT
GTCGGGTGGACGAAAACACATGGATTCTTCATTCAAATGGGAGGTTTTATGCTATACAGGGATGGATTACCTGTC
GAAGTCCTCACATACAAGAGGTTCAAAAAACTTATTGACAGACAAGAAATCGACATACCGAAGATCACCAAACGA
ACGATCAACGACAAGAGCAAAAGCGACAATTTCTCAAAAGGATTCGCCGTCATACAAACGACCTGGTTCGTGGTT
CAGTGTATAGCCCGTTGGGTGAGATCTCTTCCCTTGGTGGAGTTAGAGGTTGTAACGCTTGCCTTCGCCGTTTTG
AATGCCATCACATACGCCCTATGGCTCAGCAAGCCTCAGAATGTCCAGGAGGCGATCAGGATTGATCATCTAAAA
CCCGACAGCGACATCGAAATGCTGGAACTCTCATCTCACTCCGTTTCCCGCCCTATTGAACATCTCCCGCCAAAC
TCCCAGCGGCCCAACCCATCCGATAACAGGCAGTCCAATAACAGGCAGAGCTGGTTGCACAAACATATAAGTAAA
GACTTCAAACGATTCAAGGAGTTGAGGTACGGGCGTCTGTGGTTCGTAATATACCGCATCCCATACCGCCTCGTT
GCATCAGCATTCCGCCCTATGATGAAGCTTTTGGGGTCGCCCGAATACGGACCGCTGAACGAATCGCCGGGCGGA
CCTTTCCTGCGCGTATCGATGTTCAGCTACGAAATTACGGAAGACCTTGATCCAGAGTTGATATTAATATGCCTT
AGTTGCCTCATCGGAGCATCATTCGGGCTGCTACACGTCATTGCTTGGAATTCCGGGCCTACCGACCTCGAGCAA
CAACTTTGGAGATGCTCGACCCTCGTGATCATGATCGAACCTTTGCTTTTCATATTCACAAATCGTGTAGCCAAA
TTAGCACAAGGTGCTAGAAGCCGCTTATGGAATCGTATTGGAGATGTTATTCTAATGCTGACTGGCTTACCTTTC
ATGATTGGTCTCCCTCTTTATACGTTTGCGCGCGTTGTACTTTTAATAAAAGCGTTTGTTTCCCTTAGGCAATTG
CCTCCAGCAGCGTACTGCGACGTTGACTGGAGTTCGTTTATTCCTCACATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail