© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | AgabiH97|069130 |
| Gene name | |
| Location | scaffold_4:971122..973026 |
| Strand | - |
| Gene length (bp) | 1904 |
| Transcript length (bp) | 1527 |
| Coding sequence length (bp) | 1527 |
| Protein length (aa) | 509 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.9E-39 | 58 | 443 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 41 | 486 | 1.0E-45 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 16 | 467 | 5.0E-39 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 43 | 449 | 2.0E-37 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 10 | 485 | 1.0E-35 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 43 | 479 | 3.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9US44|YIZG_SCHPO | Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 | 41 | 486 | 1.0E-45 |
| sp|Q9US37|YFZ4_SCHPO | Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 | 16 | 467 | 5.0E-39 |
| sp|Q44470|TUB4_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 43 | 449 | 2.0E-37 |
| sp|Q9P6J0|YHDC_SCHPO | Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 | 10 | 485 | 1.0E-35 |
| sp|P70786|TUB3_AGRVI | Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 | 43 | 479 | 3.0E-33 |
| sp|Q10097|YAOI_SCHPO | Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 | 2 | 495 | 9.0E-33 |
| sp|O43000|LIZ1_SCHPO | Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 | 33 | 502 | 2.0E-31 |
| sp|Q88FY6|NICT_PSEPK | Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 | 37 | 379 | 8.0E-26 |
| sp|P53322|TNA1_YEAST | High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 | 43 | 502 | 8.0E-26 |
| sp|P39709|SEO1_YEAST | Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 | 43 | 501 | 1.0E-23 |
| sp|O94491|YC7A_SCHPO | Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 | 41 | 497 | 3.0E-23 |
| sp|P25621|FEN2_YEAST | Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 | 34 | 440 | 7.0E-23 |
| sp|P53241|VHT1_YEAST | Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 | 33 | 272 | 7.0E-22 |
| sp|P76470|RHMT_ECOLI | Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 | 46 | 450 | 4.0E-21 |
| sp|O74923|YJ7D_SCHPO | Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 | 41 | 263 | 5.0E-19 |
| sp|P40445|YIQ6_YEAST | Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 | 40 | 474 | 6.0E-18 |
| sp|O94572|YGDF_SCHPO | Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 | 40 | 266 | 1.0E-17 |
| sp|Q9C0V8|YHJ1_SCHPO | Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 | 41 | 486 | 4.0E-16 |
| sp|Q9C0U9|YQD3_SCHPO | Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 | 41 | 492 | 1.0E-14 |
| sp|O13880|VHT1_SCHPO | Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 | 29 | 496 | 1.0E-14 |
| sp|P15365|DAL5_YEAST | Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 | 41 | 344 | 4.0E-14 |
| sp|B5BP49|YP55_SCHPO | Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 | 40 | 496 | 7.0E-12 |
| sp|P39398|LGOT_ECOLI | Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 | 9 | 230 | 4.0E-11 |
| sp|Q46916|GUDP_ECOLI | Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 | 48 | 282 | 3.0E-10 |
| sp|O13879|YE1F_SCHPO | Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 | 1 | 482 | 4.0E-10 |
| sp|Q07904|THI73_YEAST | Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 | 10 | 506 | 1.0E-09 |
| sp|Q05181|PHT1_PSEPU | Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 | 39 | 439 | 1.0E-09 |
| sp|Q12235|YCT1_YEAST | High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 | 38 | 240 | 4.0E-09 |
| sp|P42237|GUDP_BACSU | Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 | 48 | 231 | 1.0E-08 |
| sp|P0CF20|YO163_YEAST | Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 | 122 | 274 | 7.0E-08 |
| sp|O84548|UHPT_CHLTR | Probable hexose phosphate transport protein OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_544 PE=3 SV=1 | 82 | 371 | 7.0E-08 |
| sp|Q0K843|SAUU_CUPNH | Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 | 44 | 244 | 9.0E-08 |
| sp|P0AA76|DGOT_ECOLI | D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 | 40 | 231 | 1.0E-07 |
| sp|P0AA77|DGOT_ECOL6 | D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 | 40 | 231 | 1.0E-07 |
| sp|P0AA80|GARP_ECOLI | Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 | 36 | 192 | 4.0E-07 |
| sp|P0AA81|GARP_ECO57 | Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 | 36 | 192 | 4.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 54 | 76 | 22 |
| 2 | 91 | 113 | 22 |
| 3 | 120 | 142 | 22 |
| 4 | 146 | 168 | 22 |
| 5 | 180 | 202 | 22 |
| 6 | 217 | 236 | 19 |
| 7 | 294 | 316 | 22 |
| 8 | 336 | 358 | 22 |
| 9 | 370 | 392 | 22 |
| 10 | 397 | 419 | 22 |
| 11 | 426 | 448 | 22 |
| 12 | 458 | 480 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|069130 MMSDRSPSEEERPLISPQTLSSQRYDSGRSAQFSGTADRKKTERRLLKKLDIRMSVLMLMYIVSCIDRSSAAAAR LRGFEDDLGLKGPQFASVLSAFFVGYIIMQIPSNMILSQVKKPSLYLPCCMILCGSTSFLTGFAHNYYGALVARF LLGLSEATFFPGALYLIAKWYKRDELSLRTAFLVCGTNVSMAFGALIASGVLDLMDGVLGCTAWRWLFFVEGGLT IIIAIIAIFILPDYPETETIPWLTSSEHALAKARMREDAAAGVDFPKRSDKCNSEVDSMIRIESTATTGFILALT DWKVWFVAFAQFFFVVSCSHYLYFPTLTETMGYNSTISLLLCAPPWLISAAWSLWISWHSDNKGERCMHVVIPYL IATVGFILAISTMNTIVRYLSLFLLAQALAGYICLIAWSSSTVSNPPEQRAVALALINTISQSGNIVGSFVWVKA WGPAYKQSFAICGIAGLISLVMCLWLRKALKRMNKEMDLRDKMGEEAVYSKKGWRYYT* |
| Coding | >AgabiH97|069130 ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTCATCGCAGCGCTAT GATTCTGGCAGATCAGCACAATTCTCAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTA GACATCCGAATGTCAGTCTTAATGCTCATGTATATCGTCAGCTGCATAGATCGTAGTAGCGCGGCTGCTGCTCGG TTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCTGCTTTCTTCGTTGGC TACATAATAATGCAAATACCCTCGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCTTGTTGC ATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGATTTGCACACAATTATTATGGCGCTCTCGTAGCCCGGTTC CTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTACCTTATTGCCAAATGGTACAAGCGAGATGAA TTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGCATGGCATTTGGTGCCCTCATTGCTTCTGGG GTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGTTGGTTGTTCTTCGTCGAAGGTGGTTTAACC ATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCCGAAACTGAAACCATCCCATGGCTTACGTCG AGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCTGCTGGTGTTGATTTTCCAAAACGCTCGGAC AAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACAGCAACTACAGGCTTCATTCTAGCACTTACA GACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTTGTTTCCTGCTCGCATTACCTCTACTTCCCC ACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTACTTTGCGCTCCTCCCTGGCTTATTTCTGCC GCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAACGTTGCATGCATGTCGTTATCCCGTACCTT ATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACGATTGTTCGTTATTTATCATTATTCTTACTG GCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAACGC GCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGGCG TGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCTGG TTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATTCG AAGAAGGGTTGGAGATATTACACTTGA |
| Transcript | >AgabiH97|069130 ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTCATCGCAGCGCTAT GATTCTGGCAGATCAGCACAATTCTCAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTA GACATCCGAATGTCAGTCTTAATGCTCATGTATATCGTCAGCTGCATAGATCGTAGTAGCGCGGCTGCTGCTCGG TTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCTGCTTTCTTCGTTGGC TACATAATAATGCAAATACCCTCGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCTTGTTGC ATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGATTTGCACACAATTATTATGGCGCTCTCGTAGCCCGGTTC CTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTACCTTATTGCCAAATGGTACAAGCGAGATGAA TTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGCATGGCATTTGGTGCCCTCATTGCTTCTGGG GTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGTTGGTTGTTCTTCGTCGAAGGTGGTTTAACC ATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCCGAAACTGAAACCATCCCATGGCTTACGTCG AGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCTGCTGGTGTTGATTTTCCAAAACGCTCGGAC AAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACAGCAACTACAGGCTTCATTCTAGCACTTACA GACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTTGTTTCCTGCTCGCATTACCTCTACTTCCCC ACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTACTTTGCGCTCCTCCCTGGCTTATTTCTGCC GCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAACGTTGCATGCATGTCGTTATCCCGTACCTT ATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACGATTGTTCGTTATTTATCATTATTCTTACTG GCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAACGC GCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGGCG TGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCTGG TTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATTCG AAGAAGGGTTGGAGATATTACACTTGA |
| Gene | >AgabiH97|069130 ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTGTATTTGCTTCCTC CTCGTCCTTTGTTCAGAAGCTCATTTATTGCTGTAGCATCGCAGCGCTATGATTCTGGCAGATCAGCACAATTCT CAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTAGACATCCGAATGTCAGTCTTAATGC TCATGTATATCGTCAGCTGTGAGTACCTCAGTTATTCCACCCAGTTGCGTTGCACGTCGAGGTTGAGCATCTATT AGGCATAGATCGTAGTAGCGCGGCGTATGTGATTGTCCTTTTTTCCCTGGATGACAACCGATTTTACCTGCTTCG TCTAGTGCTGCTCGGTTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCT GCTTTCTTCGTTGGCTACATAATAATGCAAATACCCTCGTAGGTTTCTAGAATAAGAATTCTACCTTACTTATCA TCGGCTAGAATCTGACGGCGCAACACTAGGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCT TGTTGCATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGTTCGTGAATCAGACTGTCGTCCCACGCCGATTCT CATGCCGCCCATCCAGGATTTGCACACAAGTATGAGAGATTTTTCCATGTCTTATGATTCATCTTAATTTATTTT AGTTATTATGGCGCTCTCGTAGCCCGGTTCCTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTAC CTTATTGCCAAATGGTACAAGCGAGATGAATTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGC ATGGCATTTGGTGCCCTCATTGCTTCTGGGGTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGT TGGTTGTTCTTCGTCGAAGGTGGTTTAACCATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCC GAAACTGAAACCATCCCATGGCTTACGTCGAGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCT GCTGGTGTTGATTTTCCAAAACGCTCGGACAAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACA GCAACTACAGGCTTCATTCTAGCACTTACAGACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTT GTTTCCTGCTCGCATTACCTCTACTTCCCCACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTA CTTTGCGCTCCTCCCTGGCTTATTTCTGCCGCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAA CGTTGCATGCATGTCGTTATCCCGTACCTTATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACG ATTGTTCGTTATTTATCATTGTAAGATTACCTCTTAACCCTCAAATCACTGTAACTAAAGCCCATAGATTCTTAC TGGCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAAC GCGCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGG CGTGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCT GGTTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATT CGAAGAAGGGTTGGAGATATTACACTTGA |