Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|069130
Gene name
Locationscaffold_4:971122..973026
Strand-
Gene length (bp)1904
Transcript length (bp)1527
Coding sequence length (bp)1527
Protein length (aa) 509

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 3.9E-39 58 443

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 41 486 1.0E-45
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 16 467 5.0E-39
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 43 449 2.0E-37
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 485 1.0E-35
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 43 479 3.0E-33
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 41 486 1.0E-45
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 16 467 5.0E-39
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 43 449 2.0E-37
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 10 485 1.0E-35
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 43 479 3.0E-33
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 2 495 9.0E-33
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 33 502 2.0E-31
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 37 379 8.0E-26
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 43 502 8.0E-26
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 43 501 1.0E-23
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 41 497 3.0E-23
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 34 440 7.0E-23
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 33 272 7.0E-22
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 46 450 4.0E-21
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 41 263 5.0E-19
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 40 474 6.0E-18
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 40 266 1.0E-17
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 41 486 4.0E-16
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 41 492 1.0E-14
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 29 496 1.0E-14
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 41 344 4.0E-14
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 40 496 7.0E-12
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 9 230 4.0E-11
sp|Q46916|GUDP_ECOLI Probable glucarate transporter OS=Escherichia coli (strain K12) GN=gudP PE=1 SV=1 48 282 3.0E-10
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 1 482 4.0E-10
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 10 506 1.0E-09
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 39 439 1.0E-09
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 38 240 4.0E-09
sp|P42237|GUDP_BACSU Probable glucarate transporter OS=Bacillus subtilis (strain 168) GN=gudP PE=3 SV=2 48 231 1.0E-08
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 122 274 7.0E-08
sp|O84548|UHPT_CHLTR Probable hexose phosphate transport protein OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=CT_544 PE=3 SV=1 82 371 7.0E-08
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 44 244 9.0E-08
sp|P0AA76|DGOT_ECOLI D-galactonate transporter OS=Escherichia coli (strain K12) GN=dgoT PE=1 SV=1 40 231 1.0E-07
sp|P0AA77|DGOT_ECOL6 D-galactonate transporter OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=dgoT PE=3 SV=1 40 231 1.0E-07
sp|P0AA80|GARP_ECOLI Probable galactarate transporter OS=Escherichia coli (strain K12) GN=garP PE=1 SV=1 36 192 4.0E-07
sp|P0AA81|GARP_ECO57 Probable galactarate transporter OS=Escherichia coli O157:H7 GN=garP PE=3 SV=1 36 192 4.0E-07
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0008150 biological_process No
GO:0009987 cellular process No
GO:0005215 transporter activity No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 41 0.5

Transmembrane Domains

Domain # Start End Length
1 54 76 22
2 91 113 22
3 120 142 22
4 146 168 22
5 180 202 22
6 217 236 19
7 294 316 22
8 336 358 22
9 370 392 22
10 397 419 22
11 426 448 22
12 458 480 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|069130
MMSDRSPSEEERPLISPQTLSSQRYDSGRSAQFSGTADRKKTERRLLKKLDIRMSVLMLMYIVSCIDRSSAAAAR
LRGFEDDLGLKGPQFASVLSAFFVGYIIMQIPSNMILSQVKKPSLYLPCCMILCGSTSFLTGFAHNYYGALVARF
LLGLSEATFFPGALYLIAKWYKRDELSLRTAFLVCGTNVSMAFGALIASGVLDLMDGVLGCTAWRWLFFVEGGLT
IIIAIIAIFILPDYPETETIPWLTSSEHALAKARMREDAAAGVDFPKRSDKCNSEVDSMIRIESTATTGFILALT
DWKVWFVAFAQFFFVVSCSHYLYFPTLTETMGYNSTISLLLCAPPWLISAAWSLWISWHSDNKGERCMHVVIPYL
IATVGFILAISTMNTIVRYLSLFLLAQALAGYICLIAWSSSTVSNPPEQRAVALALINTISQSGNIVGSFVWVKA
WGPAYKQSFAICGIAGLISLVMCLWLRKALKRMNKEMDLRDKMGEEAVYSKKGWRYYT*
Coding >AgabiH97|069130
ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTCATCGCAGCGCTAT
GATTCTGGCAGATCAGCACAATTCTCAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTA
GACATCCGAATGTCAGTCTTAATGCTCATGTATATCGTCAGCTGCATAGATCGTAGTAGCGCGGCTGCTGCTCGG
TTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCTGCTTTCTTCGTTGGC
TACATAATAATGCAAATACCCTCGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCTTGTTGC
ATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGATTTGCACACAATTATTATGGCGCTCTCGTAGCCCGGTTC
CTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTACCTTATTGCCAAATGGTACAAGCGAGATGAA
TTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGCATGGCATTTGGTGCCCTCATTGCTTCTGGG
GTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGTTGGTTGTTCTTCGTCGAAGGTGGTTTAACC
ATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCCGAAACTGAAACCATCCCATGGCTTACGTCG
AGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCTGCTGGTGTTGATTTTCCAAAACGCTCGGAC
AAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACAGCAACTACAGGCTTCATTCTAGCACTTACA
GACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTTGTTTCCTGCTCGCATTACCTCTACTTCCCC
ACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTACTTTGCGCTCCTCCCTGGCTTATTTCTGCC
GCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAACGTTGCATGCATGTCGTTATCCCGTACCTT
ATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACGATTGTTCGTTATTTATCATTATTCTTACTG
GCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAACGC
GCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGGCG
TGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCTGG
TTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATTCG
AAGAAGGGTTGGAGATATTACACTTGA
Transcript >AgabiH97|069130
ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTCATCGCAGCGCTAT
GATTCTGGCAGATCAGCACAATTCTCAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTA
GACATCCGAATGTCAGTCTTAATGCTCATGTATATCGTCAGCTGCATAGATCGTAGTAGCGCGGCTGCTGCTCGG
TTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCTGCTTTCTTCGTTGGC
TACATAATAATGCAAATACCCTCGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCTTGTTGC
ATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGATTTGCACACAATTATTATGGCGCTCTCGTAGCCCGGTTC
CTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTACCTTATTGCCAAATGGTACAAGCGAGATGAA
TTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGCATGGCATTTGGTGCCCTCATTGCTTCTGGG
GTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGTTGGTTGTTCTTCGTCGAAGGTGGTTTAACC
ATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCCGAAACTGAAACCATCCCATGGCTTACGTCG
AGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCTGCTGGTGTTGATTTTCCAAAACGCTCGGAC
AAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACAGCAACTACAGGCTTCATTCTAGCACTTACA
GACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTTGTTTCCTGCTCGCATTACCTCTACTTCCCC
ACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTACTTTGCGCTCCTCCCTGGCTTATTTCTGCC
GCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAACGTTGCATGCATGTCGTTATCCCGTACCTT
ATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACGATTGTTCGTTATTTATCATTATTCTTACTG
GCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAACGC
GCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGGCG
TGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCTGG
TTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATTCG
AAGAAGGGTTGGAGATATTACACTTGA
Gene >AgabiH97|069130
ATGATGTCCGATCGCTCACCATCGGAGGAGGAGCGTCCCCTGATTTCCCCTCAAACTCTTTGTATTTGCTTCCTC
CTCGTCCTTTGTTCAGAAGCTCATTTATTGCTGTAGCATCGCAGCGCTATGATTCTGGCAGATCAGCACAATTCT
CAGGGACTGCGGATAGGAAGAAGACAGAGAGACGACTGCTCAAGAAGCTAGACATCCGAATGTCAGTCTTAATGC
TCATGTATATCGTCAGCTGTGAGTACCTCAGTTATTCCACCCAGTTGCGTTGCACGTCGAGGTTGAGCATCTATT
AGGCATAGATCGTAGTAGCGCGGCGTATGTGATTGTCCTTTTTTCCCTGGATGACAACCGATTTTACCTGCTTCG
TCTAGTGCTGCTCGGTTGCGCGGGTTCGAGGATGATTTAGGCTTGAAAGGGCCCCAATTCGCATCCGTTTTGTCT
GCTTTCTTCGTTGGCTACATAATAATGCAAATACCCTCGTAGGTTTCTAGAATAAGAATTCTACCTTACTTATCA
TCGGCTAGAATCTGACGGCGCAACACTAGGAATATGATCCTCAGTCAAGTCAAGAAACCATCTCTTTATTTGCCT
TGTTGCATGATTCTTTGTGGATCAACCTCTTTTCTAACAGGTTCGTGAATCAGACTGTCGTCCCACGCCGATTCT
CATGCCGCCCATCCAGGATTTGCACACAAGTATGAGAGATTTTTCCATGTCTTATGATTCATCTTAATTTATTTT
AGTTATTATGGCGCTCTCGTAGCCCGGTTCCTTCTTGGATTATCAGAAGCCACTTTCTTCCCGGGTGCCCTTTAC
CTTATTGCCAAATGGTACAAGCGAGATGAATTGTCTCTACGGACCGCGTTCCTCGTATGTGGTACCAATGTCAGC
ATGGCATTTGGTGCCCTCATTGCTTCTGGGGTACTGGACCTTATGGATGGCGTGTTAGGCTGCACAGCGTGGCGT
TGGTTGTTCTTCGTCGAAGGTGGTTTAACCATCATCATCGCAATTATTGCTATTTTCATCCTTCCCGACTATCCC
GAAACTGAAACCATCCCATGGCTTACGTCGAGCGAGCACGCTCTAGCGAAAGCAAGAATGCGTGAAGACGCCGCT
GCTGGTGTTGATTTTCCAAAACGCTCGGACAAGTGTAACAGCGAAGTTGATTCGATGATACGAATCGAAAGTACA
GCAACTACAGGCTTCATTCTAGCACTTACAGACTGGAAGGTCTGGTTTGTGGCGTTTGCACAATTCTTTTTCGTT
GTTTCCTGCTCGCATTACCTCTACTTCCCCACTCTCACTGAAACCATGGGCTATAACTCCACGATCTCTCTTCTA
CTTTGCGCTCCTCCCTGGCTTATTTCTGCCGCATGGTCTCTATGGATATCCTGGCATTCCGATAACAAAGGCGAA
CGTTGCATGCATGTCGTTATCCCGTACCTTATCGCCACCGTGGGTTTTATATTGGCAATATCGACGATGAACACG
ATTGTTCGTTATTTATCATTGTAAGATTACCTCTTAACCCTCAAATCACTGTAACTAAAGCCCATAGATTCTTAC
TGGCGCAAGCCCTAGCGGGATATATATGTCTTATCGCATGGTCTTCATCAACAGTTTCAAATCCTCCCGAACAAC
GCGCAGTTGCACTGGCTCTCATAAATACCATATCACAAAGTGGTAACATAGTTGGGTCTTTTGTGTGGGTGAAGG
CGTGGGGACCTGCTTATAAGCAGTCGTTCGCTATCTGTGGTATAGCTGGGTTGATATCCCTGGTGATGTGTCTCT
GGTTAAGGAAGGCGCTGAAGCGTATGAACAAAGAGATGGATTTGCGAGATAAGATGGGTGAGGAGGCCGTATATT
CGAAGAAGGGTTGGAGATATTACACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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