Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|068590
Gene name
Locationscaffold_4:832272..833469
Strand-
Gene length (bp)1197
Transcript length (bp)1032
Coding sequence length (bp)1032
Protein length (aa) 344

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 16 0.45

Transmembrane Domains

Domain # Start End Length
1 251 273 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|068590
MRLLPLLALPSLVAAQYFSAGWQPGQPLHETQSSPAPTYTPAPQPAKGLSELFSLNTLLTLPPVAGLFERFGINI
TERVALSRADLWDERIPLITDDNFNELIANEPLTEEEEEKRVWVVVISVTAAKQEGLSKYLDQVFDSAYNETLEK
NDLPNIRWGRIDYLDVTYLTTKWNVWQAPYLAVITNRGKTLRFYRPHQIRLRDYALRDFLLTDGWQITPPWESRY
APGGDREWVLDLIATYLAKAYNYIVLVPRWALYILTGAIGSVILNFLHRPSKKRTPAKPPVKGGSTSAQSTTSTT
EKSDEAAAVSAVQIKPEPTNVPSTPTTPRSTPRRNGKKGKGRQ*
Coding >AgabiH97|068590
ATGCGCCTCCTCCCCCTCCTCGCTCTGCCCTCCCTCGTCGCCGCCCAGTACTTCTCTGCGGGTTGGCAGCCTGGC
CAGCCTCTGCACGAGACCCAGTCCTCCCCGGCACCCACATATACCCCCGCGCCACAACCCGCAAAAGGCTTATCG
GAGCTCTTCAGCCTCAACACCCTTCTCACCTTGCCCCCTGTCGCTGGTTTGTTTGAGCGCTTCGGAATTAACATC
ACCGAACGCGTGGCTCTTTCCAGGGCTGATCTTTGGGACGAGCGAATACCGCTTATCACGGACGACAACTTTAAC
GAACTCATTGCCAATGAACCCCTCACCGAAGAGGAGGAAGAAAAGCGCGTATGGGTTGTAGTCATCTCTGTCACC
GCTGCTAAACAAGAAGGTCTTTCCAAATACCTCGATCAAGTCTTCGACTCCGCCTACAACGAAACTCTCGAAAAG
AACGATCTTCCCAACATTCGCTGGGGTCGCATCGACTATCTCGATGTGACTTATCTAACCACAAAGTGGAACGTT
TGGCAAGCGCCATATCTTGCCGTTATCACCAACCGAGGAAAGACTTTGCGTTTCTATAGACCGCATCAAATACGT
CTCAGGGACTACGCTCTCCGTGACTTTCTCTTGACCGACGGCTGGCAAATCACCCCTCCCTGGGAGTCCCGTTAC
GCACCGGGAGGCGATCGTGAATGGGTTCTAGATTTGATTGCCACCTATCTCGCCAAGGCTTATAACTATATCGTC
CTTGTTCCTCGCTGGGCCTTGTATATTCTCACCGGCGCTATCGGTTCCGTTATTCTCAATTTCCTTCACCGTCCT
TCGAAGAAACGGACTCCAGCCAAACCCCCTGTCAAAGGAGGATCAACGTCTGCACAAAGCACCACATCCACTACC
GAAAAGTCTGATGAAGCCGCTGCTGTATCTGCTGTACAAATAAAGCCAGAGCCTACCAATGTGCCCTCCACTCCC
ACCACTCCACGCTCGACTCCGCGCCGCAACGGCAAGAAAGGTAAAGGCCGACAATAA
Transcript >AgabiH97|068590
ATGCGCCTCCTCCCCCTCCTCGCTCTGCCCTCCCTCGTCGCCGCCCAGTACTTCTCTGCGGGTTGGCAGCCTGGC
CAGCCTCTGCACGAGACCCAGTCCTCCCCGGCACCCACATATACCCCCGCGCCACAACCCGCAAAAGGCTTATCG
GAGCTCTTCAGCCTCAACACCCTTCTCACCTTGCCCCCTGTCGCTGGTTTGTTTGAGCGCTTCGGAATTAACATC
ACCGAACGCGTGGCTCTTTCCAGGGCTGATCTTTGGGACGAGCGAATACCGCTTATCACGGACGACAACTTTAAC
GAACTCATTGCCAATGAACCCCTCACCGAAGAGGAGGAAGAAAAGCGCGTATGGGTTGTAGTCATCTCTGTCACC
GCTGCTAAACAAGAAGGTCTTTCCAAATACCTCGATCAAGTCTTCGACTCCGCCTACAACGAAACTCTCGAAAAG
AACGATCTTCCCAACATTCGCTGGGGTCGCATCGACTATCTCGATGTGACTTATCTAACCACAAAGTGGAACGTT
TGGCAAGCGCCATATCTTGCCGTTATCACCAACCGAGGAAAGACTTTGCGTTTCTATAGACCGCATCAAATACGT
CTCAGGGACTACGCTCTCCGTGACTTTCTCTTGACCGACGGCTGGCAAATCACCCCTCCCTGGGAGTCCCGTTAC
GCACCGGGAGGCGATCGTGAATGGGTTCTAGATTTGATTGCCACCTATCTCGCCAAGGCTTATAACTATATCGTC
CTTGTTCCTCGCTGGGCCTTGTATATTCTCACCGGCGCTATCGGTTCCGTTATTCTCAATTTCCTTCACCGTCCT
TCGAAGAAACGGACTCCAGCCAAACCCCCTGTCAAAGGAGGATCAACGTCTGCACAAAGCACCACATCCACTACC
GAAAAGTCTGATGAAGCCGCTGCTGTATCTGCTGTACAAATAAAGCCAGAGCCTACCAATGTGCCCTCCACTCCC
ACCACTCCACGCTCGACTCCGCGCCGCAACGGCAAGAAAGGTAAAGGCCGACAATAA
Gene >AgabiH97|068590
ATGCGCCTCCTCCCCCTCCTCGCTCTGCCCTCCCTCGTCGCCGCCCAGTACTTCTCTGCGGGTTGGCAGCCTGGC
CAGCCTCTGCACGAGACCCAGTCCTCCCCGGCACCCACATATACCCCCGCGCCACAACCCGCAAAAGGCTTATCG
GAGCTCTTCAGCCTCAACACCCTTCTCACCTTGCCCCCTGTCGCTGGTTTGTTTGAGCGCTTCGGAATTAACATC
ACCGAACGCGTGGCTCTTTCCAGGGCTGATCTTTGGGACGAGCGAATACCGCTTATCACGGACGACAACTTTAAC
GAACTCATTGCCAATGAACCCCTCACCGAAGAGGAGGAAGAAAAGCGCGTATGGGTTGTAGTCATGTATGTCCTT
TGCATTTCTTTCTTTGCACCCGTCTCATTGCTGCCTGCACAGCTCTGTCACCGCTGCTAAACAAGAAGGTCTTTC
CAAATACCTCGATCAAGTCTTCGACTCCGCCTACAACGAAACTCTCGAAAAGAACGATCTTCCCAACATTCGCTG
GGGTCGCATCGACTATCTCGATGTGACTTATCTAACCACAAAGTGGAACGTTTGGCAGTAAGTCTTTGGTTCTCG
TAGAAGAAAAATTGCATTGCCTTATTCGTGTTTTTTTTTTTCAGAGCGCCATATCTTGCCGTTATCACCAACCGA
GGAAAGACTTTGCGTTTCTATAGACCGCATCAAATACGTCTCAGGGACTACGCTCTCCGTGACTTTCTCTTGACC
GACGGCTGGCAAATCACCCCTCCCTGGGAGTCCCGTTACGCACCGGGAGGCGATCGGTTAGCTTTTATTGTTTAT
TTAACCTTTATTCTTCGCTAACACTATATTAGTGAATGGGTTCTAGATTTGATTGCCACCTATCTCGCCAAGGCT
TATAACTATATCGTCCTTGTTCCTCGCTGGGCCTTGTATATTCTCACCGGCGCTATCGGTTCCGTTATTCTCAAT
TTCCTTCACCGTCCTTCGAAGAAACGGACTCCAGCCAAACCCCCTGTCAAAGGAGGATCAACGTCTGCACAAAGC
ACCACATCCACTACCGAAAAGTCTGATGAAGCCGCTGCTGTATCTGCTGTACAAATAAAGCCAGAGCCTACCAAT
GTGCCCTCCACTCCCACCACTCCACGCTCGACTCCGCGCCGCAACGGCAAGAAAGGTAAAGGCCGACAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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