Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|068530
Gene name
Locationscaffold_4:817847..819554
Strand-
Gene length (bp)1707
Transcript length (bp)1242
Coding sequence length (bp)1242
Protein length (aa) 414

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09668 Asp_protease Aspartyl protease 1.7E-60 165 288
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 3.1E-20 191 281
PF13650 Asp_protease_2 Aspartyl protease 1.2E-09 191 278
PF00240 ubiquitin Ubiquitin family 2.7E-08 4 71

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0CS15|DDI1_CRYNB DNA damage-inducible protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DDI1 PE=3 SV=1 16 413 2.0E-119
sp|P0CS14|DDI1_CRYNJ DNA damage-inducible protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DDI1 PE=3 SV=1 16 413 2.0E-119
sp|Q0CJ13|DDI1_ASPTN DNA damage-inducible protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ddi1 PE=3 SV=1 21 413 2.0E-99
sp|Q7S906|DDI1_NEUCR DNA damage-inducible protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ddi-1 PE=3 SV=2 13 413 7.0E-98
sp|Q2H085|DDI1_CHAGB DNA damage-inducible protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DDI1 PE=3 SV=2 13 413 7.0E-98
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Swissprot ID Swissprot Description Start End E-value
sp|P0CS15|DDI1_CRYNB DNA damage-inducible protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DDI1 PE=3 SV=1 16 413 2.0E-119
sp|P0CS14|DDI1_CRYNJ DNA damage-inducible protein 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DDI1 PE=3 SV=1 16 413 2.0E-119
sp|Q0CJ13|DDI1_ASPTN DNA damage-inducible protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ddi1 PE=3 SV=1 21 413 2.0E-99
sp|Q7S906|DDI1_NEUCR DNA damage-inducible protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ddi-1 PE=3 SV=2 13 413 7.0E-98
sp|Q2H085|DDI1_CHAGB DNA damage-inducible protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DDI1 PE=3 SV=2 13 413 7.0E-98
sp|Q2USD7|DDI1_ASPOR DNA damage-inducible protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=ddi1 PE=3 SV=2 21 413 3.0E-97
sp|A1DCU5|DDI1_NEOFI DNA damage-inducible protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ddi1 PE=3 SV=1 21 413 8.0E-97
sp|Q4WGS4|DDI1_ASPFU DNA damage-inducible protein 1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=ddi1 PE=3 SV=1 21 413 2.0E-95
sp|Q5AY89|DDI1_EMENI DNA damage-inducible protein 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ddi1 PE=3 SV=2 21 413 5.0E-94
sp|Q1DNB9|DDI1_COCIM DNA damage-inducible protein 1 OS=Coccidioides immitis (strain RS) GN=DDI1 PE=3 SV=3 7 413 5.0E-93
sp|Q0U3Y6|DDI1_PHANO DNA damage-inducible protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=DDI1 PE=3 SV=2 10 413 1.0E-92
sp|A1CDT9|DDI1_ASPCL DNA damage-inducible protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ddi1 PE=3 SV=1 21 413 1.0E-92
sp|Q10256|MUD1_SCHPO UBA domain-containing protein mud1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mud1 PE=1 SV=1 87 413 8.0E-91
sp|Q7ZYA7|DDI2_XENLA Protein DDI1 homolog 2 OS=Xenopus laevis GN=ddi2 PE=2 SV=1 12 314 3.0E-82
sp|Q497D6|DDI2_XENTR Protein DDI1 homolog 2 OS=Xenopus tropicalis GN=ddi2 PE=2 SV=1 12 322 1.0E-81
sp|Q6BK42|DDI1_DEBHA DNA damage-inducible protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DDI1 PE=3 SV=2 1 413 8.0E-81
sp|Q5TDH0|DDI2_HUMAN Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1 12 322 1.0E-80
sp|A2ADY9|DDI2_MOUSE Protein DDI1 homolog 2 OS=Mus musculus GN=Ddi2 PE=1 SV=1 12 322 7.0E-80
sp|P40087|DDI1_YEAST DNA damage-inducible protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DDI1 PE=1 SV=1 1 413 6.0E-79
sp|Q6TH22|DDI2_DANRE Protein DDI1 homolog 2 OS=Danio rerio GN=ddi2 PE=2 SV=1 12 314 8.0E-77
sp|Q6FQE9|DDI1_CANGA DNA damage-inducible protein 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DDI1 PE=3 SV=1 1 413 1.0E-76
sp|Q6CNS3|DDI1_KLULA DNA damage-inducible protein 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DDI1 PE=3 SV=1 21 413 2.0E-76
sp|Q2T9Z1|DDI1_BOVIN Protein DDI1 homolog 1 OS=Bos taurus GN=DDI1 PE=2 SV=1 12 327 5.0E-72
sp|Q8WTU0|DDI1_HUMAN Protein DDI1 homolog 1 OS=Homo sapiens GN=DDI1 PE=1 SV=1 12 314 1.0E-70
sp|Q754R2|DDI1_ASHGO DNA damage-inducible protein 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DDI1 PE=3 SV=1 87 413 3.0E-69
sp|Q9DAF3|DDI1_MOUSE Protein DDI1 homolog 1 OS=Mus musculus GN=Ddi1 PE=1 SV=1 88 350 1.0E-66
sp|A0JPP7|DDI1_RAT Protein DDI1 homolog 1 OS=Rattus norvegicus GN=Ddi1 PE=1 SV=1 74 314 7.0E-66
sp|Q95JI3|DDI1_MACFA Protein DDI1 homolog 1 OS=Macaca fascicularis GN=DDI1 PE=2 SV=1 88 317 9.0E-66
sp|Q54JB0|DDI1_DICDI Protein DDI1 homolog OS=Dictyostelium discoideum GN=ddi1 PE=3 SV=1 23 413 2.0E-63
sp|Q6CFI3|DDI1_YARLI DNA damage-inducible protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DDI1 PE=3 SV=1 11 413 1.0E-56
sp|Q09PK2|APRV1_MOUSE Retroviral-like aspartic protease 1 OS=Mus musculus GN=Asprv1 PE=1 SV=1 190 305 2.0E-06
sp|Q53RT3|APRV1_HUMAN Retroviral-like aspartic protease 1 OS=Homo sapiens GN=ASPRV1 PE=1 SV=1 162 320 4.0E-06
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GO

GO Term Description Terminal node
GO:0004190 aspartic-type endopeptidase activity Yes
GO:0005515 protein binding Yes
GO:0006508 proteolysis Yes
GO:0016787 hydrolase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0005488 binding No
GO:1901564 organonitrogen compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0019538 protein metabolic process No
GO:0008233 peptidase activity No
GO:0008152 metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0003674 molecular_function No
GO:0004175 endopeptidase activity No
GO:0044238 primary metabolic process No
GO:0003824 catalytic activity No
GO:0070001 aspartic-type peptidase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|068530
MKLTFANDLGQTFSLEIDSGMELENVMALLEAEAGIPVSEQAIHFRDQELLDPKKTMLEYGIPDDAVLLLRRKVA
SVGGRALEQDAEMMRLQLLGDPSLMSQMQQEFPELAQAALNDPSRFVELLRRTRERQHEAELQHQHELQRLNDDP
FDVEAQTKIEEHIRQEAVLENMQHALEYSPESFGRVHMLYIPVEVNSRPVKAFVDSGAQQTIMSPSCAERCGIMR
LVDKRFSGIARGVGTAKILGRVHSAQLKLADLHLPCSFTIMEGREVDLLFGLDMLKAHQACIDLEKDVLRIQGRE
VKFLPEHELPLSAQDIDPEALASGSTPSLGTGGNPGGESTSGPPFPGSGRTIGSNPAVAGRPPLQQQASSPQSSR
HSETSVKTLMDLGASREQAISLLDAAGGNVDVAASLMF*
Coding >AgabiH97|068530
ATGAAATTGACTTTTGCAAATGATCTCGGCCAGACGTTTAGTCTTGAAATCGATTCGGGAATGGAACTAGAGAAT
GTGATGGCTTTACTCGAGGCTGAGGCGGGAATTCCTGTATCGGAACAAGCTATTCATTTTCGTGATCAAGAACTT
TTGGATCCTAAGAAGACGATGTTGGAATATGGGATTCCGGATGATGCAGTACTCTTACTTCGGCGGAAAGTTGCT
AGTGTTGGTGGGAGAGCGCTTGAACAAGACGCTGAGATGATGCGATTACAACTTTTAGGCGATCCGAGCCTTATG
AGTCAAATGCAACAAGAATTCCCAGAACTCGCACAAGCAGCCCTAAATGATCCCTCAAGATTCGTAGAACTTCTA
AGACGAACTCGCGAACGTCAACATGAAGCTGAATTACAACATCAACATGAACTTCAACGATTGAATGATGATCCA
TTTGATGTTGAAGCTCAGACAAAGATTGAAGAACATATTAGACAGGAAGCTGTTTTGGAGAATATGCAGCATGCG
TTGGAGTATTCTCCGGAAAGTTTTGGGAGAGTTCATATGCTCTATATACCGGTGGAGGTGAATTCTCGTCCGGTG
AAAGCGTTCGTAGACAGTGGAGCCCAACAAACCATCATGAGTCCTAGTTGTGCGGAAAGATGTGGTATCATGCGT
CTGGTCGACAAACGATTCTCGGGTATCGCACGCGGCGTTGGAACAGCCAAAATTCTAGGACGAGTCCACAGTGCC
CAATTAAAACTTGCAGACCTTCATCTCCCTTGTTCATTCACAATAATGGAGGGTCGTGAAGTTGACCTTCTTTTC
GGTCTTGATATGCTCAAAGCGCATCAAGCGTGTATTGATTTGGAAAAAGACGTTCTTCGAATTCAAGGTCGTGAA
GTGAAATTCCTTCCAGAACACGAGTTACCTCTTTCCGCTCAGGACATCGATCCTGAAGCACTTGCATCAGGATCG
ACACCATCTTTGGGTACAGGTGGAAATCCAGGTGGAGAATCAACAAGTGGTCCACCTTTTCCCGGGTCTGGACGT
ACTATTGGTTCAAATCCTGCTGTGGCTGGCAGACCTCCTTTACAACAGCAAGCCAGTTCACCTCAGTCGAGTCGT
CATTCTGAAACTTCTGTCAAGACGTTGATGGATTTGGGGGCGTCCAGGGAACAGGCTATTAGTTTGCTCGATGCG
GCTGGGGGGAATGTTGATGTCGCAGCATCACTCATGTTTTAG
Transcript >AgabiH97|068530
ATGAAATTGACTTTTGCAAATGATCTCGGCCAGACGTTTAGTCTTGAAATCGATTCGGGAATGGAACTAGAGAAT
GTGATGGCTTTACTCGAGGCTGAGGCGGGAATTCCTGTATCGGAACAAGCTATTCATTTTCGTGATCAAGAACTT
TTGGATCCTAAGAAGACGATGTTGGAATATGGGATTCCGGATGATGCAGTACTCTTACTTCGGCGGAAAGTTGCT
AGTGTTGGTGGGAGAGCGCTTGAACAAGACGCTGAGATGATGCGATTACAACTTTTAGGCGATCCGAGCCTTATG
AGTCAAATGCAACAAGAATTCCCAGAACTCGCACAAGCAGCCCTAAATGATCCCTCAAGATTCGTAGAACTTCTA
AGACGAACTCGCGAACGTCAACATGAAGCTGAATTACAACATCAACATGAACTTCAACGATTGAATGATGATCCA
TTTGATGTTGAAGCTCAGACAAAGATTGAAGAACATATTAGACAGGAAGCTGTTTTGGAGAATATGCAGCATGCG
TTGGAGTATTCTCCGGAAAGTTTTGGGAGAGTTCATATGCTCTATATACCGGTGGAGGTGAATTCTCGTCCGGTG
AAAGCGTTCGTAGACAGTGGAGCCCAACAAACCATCATGAGTCCTAGTTGTGCGGAAAGATGTGGTATCATGCGT
CTGGTCGACAAACGATTCTCGGGTATCGCACGCGGCGTTGGAACAGCCAAAATTCTAGGACGAGTCCACAGTGCC
CAATTAAAACTTGCAGACCTTCATCTCCCTTGTTCATTCACAATAATGGAGGGTCGTGAAGTTGACCTTCTTTTC
GGTCTTGATATGCTCAAAGCGCATCAAGCGTGTATTGATTTGGAAAAAGACGTTCTTCGAATTCAAGGTCGTGAA
GTGAAATTCCTTCCAGAACACGAGTTACCTCTTTCCGCTCAGGACATCGATCCTGAAGCACTTGCATCAGGATCG
ACACCATCTTTGGGTACAGGTGGAAATCCAGGTGGAGAATCAACAAGTGGTCCACCTTTTCCCGGGTCTGGACGT
ACTATTGGTTCAAATCCTGCTGTGGCTGGCAGACCTCCTTTACAACAGCAAGCCAGTTCACCTCAGTCGAGTCGT
CATTCTGAAACTTCTGTCAAGACGTTGATGGATTTGGGGGCGTCCAGGGAACAGGCTATTAGTTTGCTCGATGCG
GCTGGGGGGAATGTTGATGTCGCAGCATCACTCATGTTTTAG
Gene >AgabiH97|068530
ATGAAATTGACTTTTGCAAATGATCTCGGCCAGACGTTTAGTCTTGAAATCGATTCGGGAATGGAACTAGAGAAT
GTGATGGCTTTACTCGAGGCTGAGGTACGTCTTACTCCCCAAGTAGCCCCCCCAGTTTCTCTTTCTCCTCTTTGT
TTTTTATTATTATTATTCGGATCTGTTGATATTTTCAAAAATCACGAACGTTAATTGTTTTTTTATTGTAGGCGG
GAATTCCTGTATCGGAACAAGCTATTCATTTTCGTGATCAAGAACTTTTGGATCCTAAGAAGACGATGTTGGAAT
ATGGGATTCCGGATGATGCAGTACTCTTACTTCGGCGGAAAGTTGCTAGTGTTGGTGGGAGGTAAGTTCTTAGGT
GAAAAAAAATTGGACATTGGTTTATTGTGGAATATGGGTTTCGTTTAGAGCGCTTGAACAAGACGCTGAGATGAT
GCGATTACAACTTTTAGGCGATCCGAGCCTTATGAGTCAAATGCAACAAGCAAGCCCGAGATATCTCTTTCTTCA
TCTTACATTCCTCTAAAATCCTATCTTCTGTAGGAATTCCCAGAACTCGCACAAGCAGCCCTAAATGATCCCTCA
AGATTCGTAGAACTTCTAAGACGAACTCGCGAACGTCAACATGAAGCTGAATTACAACATCAACATGAACTTCAA
CGATTGAATGATGATCCATTTGATGTTGAAGCTCAGACAAAGATTGAAGAACATATTAGACAGGAAGCTGTTTTG
GAGAATATGCAGCATGCGTTGGAGTATTCTCCGGAAAGTTTTGGGAGAGTTCATATGCTCTAGTGAGTGTTTTTC
TTCTGATGTATTTGATTTGGGTGTTGATATCTTTTTTTTAGTATACCGGTGGAGGTGAATTCTCGTCCGGTGAAA
GCGTTCGTAGACAGTGGAGCCCAACAAACCATCAGTATGTCAATCAAAGGTGATATTTGGTCTAATCTCACTCGC
CGACGTTCTTTGCAATTCCAGTGAGTCCTAGTTGTGCGGAAAGATGTGGGTAAGTATCAGTACCCCCTACGTGCC
ACCAAAAAAATAACATTATTGCAAGTATCATGCGTCTGGTCGACAAACGATTCTCGGGTATCGCACGCGGCGTTG
GAACAGCCAAAATTCTAGGACGAGTCCACAGTGCCCAATTAAAACTTGCAGACCTTCATCTCCCTTGTTCATTCA
CAATAATGGAGGCAAGTACGAGTTGTTTTACAAAAAAGATTGTTTTTTTTACAACCCAACCTCTAGGGTCGTGAA
GTTGACCTTCTTTTCGGTCTTGATATGCTCAAAGCGCATCAAGCGTGTATTGATTTGGAAAAAGACGTTCTTCGA
ATTCAAGGTCGTGAAGTGAAATTCCTTCCAGAACACGAGTTACCTCTTTCCGCTCAGGACATCGATCCTGAAGCA
CTTGCATCAGGATCGACACCATCTTTGGGTACAGGTGGAAATCCAGGTGGAGAATCAACAAGTGGTCCACCTTTT
CCCGGGTCTGGACGTACTATTGGTTCAAATCCTGCTGTGGCTGGCAGACCTCCTTTACAACAGCAAGCCAGTTCA
CCTCAGTCGAGTCGTCATTCTGAAACTTCTGTCAAGACGTTGATGGATTTGGGGGCGTCCAGGGAACAGGCTATT
AGTTTGCTCGATGCGGCTGGGGGGAATGTTGATGTCGCAGCATCACTCATGTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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