© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|067300 |
| Gene name | |
| Location | scaffold_4:487355..488928 |
| Strand | + |
| Gene length (bp) | 1573 |
| Transcript length (bp) | 1422 |
| Coding sequence length (bp) | 1422 |
| Protein length (aa) | 474 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00481 | PP2C | Protein phosphatase 2C | 1.3E-24 | 247 | 440 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14189|PP2C5_SCHPO | Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 | 88 | 437 | 1.0E-50 |
| sp|Q12511|PDP1_YEAST | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 | 24 | 436 | 2.0E-48 |
| sp|Q9P2J9|PDP2_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 | 88 | 440 | 2.0E-34 |
| sp|P35816|PDP1_BOVIN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 | 88 | 448 | 6.0E-33 |
| sp|O88483|PDP1_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 | 88 | 448 | 8.0E-33 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14189|PP2C5_SCHPO | Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 | 88 | 437 | 1.0E-50 |
| sp|Q12511|PDP1_YEAST | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 | 24 | 436 | 2.0E-48 |
| sp|Q9P2J9|PDP2_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 | 88 | 440 | 2.0E-34 |
| sp|P35816|PDP1_BOVIN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 | 88 | 448 | 6.0E-33 |
| sp|O88483|PDP1_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 | 88 | 448 | 8.0E-33 |
| sp|Q9P0J1|PDP1_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 | 88 | 448 | 1.0E-32 |
| sp|Q5RA52|PDP1_PONAB | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 | 88 | 448 | 1.0E-32 |
| sp|Q3UV70|PDP1_MOUSE | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 | 88 | 448 | 1.0E-32 |
| sp|O88484|PDP2_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 | 88 | 440 | 1.0E-29 |
| sp|Q9LUS8|P2C40_ARATH | Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 | 70 | 436 | 7.0E-15 |
| sp|Q7XVF9|P2C39_ORYSJ | Probable protein phosphatase 2C 39 OS=Oryza sativa subsp. japonica GN=Os04g0403701 PE=2 SV=2 | 254 | 436 | 8.0E-12 |
| sp|A3AZ89|P2C46_ORYSJ | Putative protein phosphatase 2C 46 OS=Oryza sativa subsp. japonica GN=Os05g0111800 PE=3 SV=2 | 251 | 442 | 6.0E-11 |
| sp|O82302|P2C29_ARATH | Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 | 209 | 435 | 1.0E-10 |
| sp|Q9ZV25|P2C23_ARATH | Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1 | 116 | 436 | 1.0E-09 |
| sp|Q7Y138|P2C36_ORYSJ | Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1 | 251 | 439 | 2.0E-09 |
| sp|Q8RWN7|P2C32_ARATH | Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 | 293 | 451 | 3.0E-09 |
| sp|Q7XUC5|P2C43_ORYSJ | Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=3 SV=2 | 250 | 436 | 5.0E-09 |
| sp|Q6ZGY0|P2C26_ORYSJ | Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 | 251 | 452 | 7.0E-09 |
| sp|Q84JD5|P2C68_ARATH | Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 | 249 | 439 | 1.0E-08 |
| sp|Q84T94|P2C35_ORYSJ | Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 | 251 | 436 | 1.0E-08 |
| sp|Q9FKX4|P2C79_ARATH | Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 | 251 | 439 | 2.0E-08 |
| sp|Q7XCJ7|P2C72_ORYSJ | Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1 | 247 | 436 | 2.0E-08 |
| sp|Q9SD12|P2C46_ARATH | Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 | 251 | 439 | 2.0E-08 |
| sp|Q10S32|P2C28_ORYSJ | Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 | 247 | 436 | 3.0E-08 |
| sp|Q501F9|P2C67_ARATH | Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1 | 254 | 436 | 4.0E-08 |
| sp|Q0V7V2|P2C42_ARATH | Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1 | 251 | 439 | 5.0E-08 |
| sp|Q6ZHC8|P2C25_ORYSJ | Probable protein phosphatase 2C 25 OS=Oryza sativa subsp. japonica GN=Os02g0685600 PE=2 SV=1 | 245 | 436 | 1.0E-07 |
| sp|Q7XHN8|P2C61_ORYSJ | Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1 | 250 | 465 | 5.0E-07 |
| sp|Q94CL8|P2C48_ARATH | Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1 | 254 | 436 | 6.0E-07 |
| sp|Q8H063|P2C29_ORYSJ | Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1 | 254 | 438 | 9.0E-07 |
| sp|Q9LHJ9|P2C38_ARATH | Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1 | 254 | 436 | 9.0E-07 |
| sp|Q5Z8P0|P2C60_ORYSJ | Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1 | 251 | 436 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004722 | protein serine/threonine phosphatase activity | Yes |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0003674 | molecular_function | No |
| GO:0016791 | phosphatase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0004721 | phosphoprotein phosphatase activity | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|067300 MLRRVWKPVAATVVLGVPSYYVYRSYSRNPSFELSIRARGPDGKPEMSTRRIEILPLKTLEDRINQNTSVSSHTS PEGIRWNHTTAFLASNDPIEDANATQIVHRDYSDPSAPGDYLFFTVMDGHSGTHTSQLLSKVLIKAVALELHSLS NPSSKIDSSSGVLSSAKNLLWSPKRSTPSSSPSTPSHQGPVDADPARVSHAIAEAFARLDHELTSAPLRILANNL DEESKKSRIVPDLSQHPLALTSMLPAISGSCAIMAMFDTAHRDLYVACTGDSRAVAGVWEPTEDGKGQWRVEVLS EDQTGRNPNEAQRMRSEHPPEESGDVIRNGRVLGGLEPTRAFGDSRYKWPRPIQETLNEAFMKGNGRPIRPPPSL FKTPPYVTARPVVTHRKFTFPSPNSPPTPSSEGSQKPTRFLVLATDGLWDELSNTEVVSLVAGHLQGLKGNVPKS NLPSLVHTTIGTSCKGWQLGIQG* |
| Coding | >AgabiH97|067300 ATGTTGCGGCGCGTATGGAAGCCTGTCGCTGCCACTGTCGTCCTCGGCGTCCCCTCATACTACGTTTACCGCTCC TACTCGCGCAATCCATCTTTTGAGCTCTCCATTCGCGCCAGAGGGCCGGACGGCAAGCCGGAAATGAGCACGCGG CGCATCGAGATTCTTCCCCTTAAGACTCTTGAGGATCGTATTAATCAGAATACCTCGGTTTCGTCTCATACAAGC CCTGAAGGAATCAGATGGAATCATACTACTGCATTTCTGGCCTCCAATGACCCGATAGAGGACGCCAATGCTACC CAAATTGTACATAGAGATTACTCTGACCCATCAGCTCCAGGCGACTACCTCTTCTTCACGGTCATGGACGGGCAT AGTGGCACCCACACATCACAACTTCTTTCGAAAGTTCTCATTAAGGCTGTCGCCCTTGAGCTTCATTCACTCTCA AACCCTTCATCCAAAATTGACTCCTCATCGGGCGTCCTCTCGAGTGCTAAGAATCTTCTCTGGAGCCCAAAACGT TCTACCCCTTCTTCTTCTCCCTCCACACCATCCCATCAAGGGCCTGTAGATGCAGATCCTGCACGTGTCTCACAT GCCATTGCGGAAGCCTTTGCACGTCTGGACCATGAACTCACCAGTGCTCCTCTCCGTATCCTCGCGAACAACTTG GACGAAGAATCCAAAAAGAGCAGGATAGTCCCAGACTTGAGCCAACACCCGCTTGCACTCACTTCCATGCTTCCT GCTATCTCTGGTAGCTGTGCCATCATGGCTATGTTTGACACCGCGCATCGCGATTTGTATGTTGCCTGTACAGGT GACAGTCGAGCTGTTGCTGGCGTTTGGGAACCTACGGAAGATGGTAAGGGTCAATGGAGAGTTGAGGTACTGTCC GAAGACCAGACAGGCCGAAACCCAAATGAAGCTCAGCGGATGCGTTCTGAACATCCACCGGAAGAATCTGGCGAT GTCATTCGTAATGGGCGTGTCCTGGGAGGCCTTGAACCTACTCGAGCATTCGGTGACTCTCGCTACAAATGGCCT CGACCAATCCAAGAAACCCTTAATGAAGCATTCATGAAGGGTAACGGCAGACCTATTCGCCCTCCACCTTCGCTT TTCAAGACTCCACCATATGTGACCGCACGCCCCGTTGTTACCCATCGCAAATTCACTTTCCCCTCCCCCAATTCA CCACCTACCCCATCATCAGAGGGTAGCCAGAAACCCACTCGTTTCCTCGTTCTAGCAACAGACGGTCTTTGGGAT GAGCTCTCTAATACCGAAGTGGTGTCTCTCGTAGCAGGTCACCTCCAGGGCCTAAAGGGCAATGTCCCAAAATCC AACCTCCCCTCCCTCGTACACACAACGATAGGAACGAGCTGCAAAGGCTGGCAATTGGGCATTCAAGGATGA |
| Transcript | >AgabiH97|067300 ATGTTGCGGCGCGTATGGAAGCCTGTCGCTGCCACTGTCGTCCTCGGCGTCCCCTCATACTACGTTTACCGCTCC TACTCGCGCAATCCATCTTTTGAGCTCTCCATTCGCGCCAGAGGGCCGGACGGCAAGCCGGAAATGAGCACGCGG CGCATCGAGATTCTTCCCCTTAAGACTCTTGAGGATCGTATTAATCAGAATACCTCGGTTTCGTCTCATACAAGC CCTGAAGGAATCAGATGGAATCATACTACTGCATTTCTGGCCTCCAATGACCCGATAGAGGACGCCAATGCTACC CAAATTGTACATAGAGATTACTCTGACCCATCAGCTCCAGGCGACTACCTCTTCTTCACGGTCATGGACGGGCAT AGTGGCACCCACACATCACAACTTCTTTCGAAAGTTCTCATTAAGGCTGTCGCCCTTGAGCTTCATTCACTCTCA AACCCTTCATCCAAAATTGACTCCTCATCGGGCGTCCTCTCGAGTGCTAAGAATCTTCTCTGGAGCCCAAAACGT TCTACCCCTTCTTCTTCTCCCTCCACACCATCCCATCAAGGGCCTGTAGATGCAGATCCTGCACGTGTCTCACAT GCCATTGCGGAAGCCTTTGCACGTCTGGACCATGAACTCACCAGTGCTCCTCTCCGTATCCTCGCGAACAACTTG GACGAAGAATCCAAAAAGAGCAGGATAGTCCCAGACTTGAGCCAACACCCGCTTGCACTCACTTCCATGCTTCCT GCTATCTCTGGTAGCTGTGCCATCATGGCTATGTTTGACACCGCGCATCGCGATTTGTATGTTGCCTGTACAGGT GACAGTCGAGCTGTTGCTGGCGTTTGGGAACCTACGGAAGATGGTAAGGGTCAATGGAGAGTTGAGGTACTGTCC GAAGACCAGACAGGCCGAAACCCAAATGAAGCTCAGCGGATGCGTTCTGAACATCCACCGGAAGAATCTGGCGAT GTCATTCGTAATGGGCGTGTCCTGGGAGGCCTTGAACCTACTCGAGCATTCGGTGACTCTCGCTACAAATGGCCT CGACCAATCCAAGAAACCCTTAATGAAGCATTCATGAAGGGTAACGGCAGACCTATTCGCCCTCCACCTTCGCTT TTCAAGACTCCACCATATGTGACCGCACGCCCCGTTGTTACCCATCGCAAATTCACTTTCCCCTCCCCCAATTCA CCACCTACCCCATCATCAGAGGGTAGCCAGAAACCCACTCGTTTCCTCGTTCTAGCAACAGACGGTCTTTGGGAT GAGCTCTCTAATACCGAAGTGGTGTCTCTCGTAGCAGGTCACCTCCAGGGCCTAAAGGGCAATGTCCCAAAATCC AACCTCCCCTCCCTCGTACACACAACGATAGGAACGAGCTGCAAAGGCTGGCAATTGGGCATTCAAGGATGA |
| Gene | >AgabiH97|067300 ATGTTGCGGCGCGTATGGAAGCCTGTCGCTGCCACTGTCGTCCTCGGCGTCCCCTCATACTACGTTTACCGCTCC TACTCGCGCAATCCATCTTTTGAGCTCTCCATTCGCGCCAGAGGGCCGGACGGCAAGCCGGAAATGAGCACGCGG CGCATCGAGATTCTTCCCCTTAAGACTCTTGAGGATCGTATTAATCAGAATACCTCGGTTTCGTCTCATACAAGC CCTGAAGGAATCAGATGGAATCATACTACTGCATTTCTGGCCTCCAATGACCCGATAGAGGACGCCAATGCTACC CAAATTGTACATAGAGATTACTCTGACCCATCAGCTCCAGGCGACTACCTCTTCTTCACGGTCATGGACGGGCAT AGTGGCACCCACACATCACAACTTCTTTCGAAAGTTCTCATTAAGGCTGTCGCCCTTGAGCTTCATTCACTCTCA AACCCTTCATCCAAAATTGACTCCTCATCGGGCGTCCTCTCGAGTGCTAAGAATCTTCTCTGGAGCCCAAAACGT TCTACCCCTTCTTCTTCTCCCTCCACACCATCCCATCAAGGGCCTGTAGATGCAGATCCTGCACGTGTCTCACAT GCCATTGCGGAAGCCTTTGCACGTCTGGACCATGAACTCACCAGTGCTCCTCTCCGTATCCTCGCGAACAACTTG GACGAAGAATCCAAAAAGAGCAGGATAGTCCCAGACTTGAGCCAACACCCGCTTGCACTCACTTCCATGCTTCCT GCTATCTCTGGTAGCTGTGCCATCATGGCTATGTTTGACACCGCGCATCGCGATTTGTATGTTGCCTGTACAGGT GACAGTCGAGCTGTTGCTGGCGTTTGGGAACCTACGGAAGATGGTAAGGGTCAATGGAGAGTTGAGGTACTGTCC GAAGACCAGACAGGCCGAAACCCAAATGAAGCTCAGCGGTAAGCTTCTACCACCTTTTGATTTTGCGTATCCTCG TTAATTGCCCTTCCGCAGGATGCGTTCTGAACATCCACCGGAAGAATCTGGCGATGTCATTCGTAATGGGCGTGT CCTGGGAGGCCTTGAACCTACTCGAGCATTCGGTGACTCTCGCTACAAATGGCCTCGACCAATCCAAGAAACGTA AGTCCTGACAGAGTACTTCCTTTCCCAGCTGATGATTTTATAGCCTTAATGAAGCATTCATGAAGGGTAACGGCA GACCTATTCGCCCTCCACCTTCGCTTTTCAAGACTCCACCATATGTGACCGCACGCCCCGTTGTTACCCATCGCA AATTCACTTTCCCCTCCCCCAATTCACCACCTACCCCATCATCAGAGGGTAGCCAGAAACCCACTCGTTTCCTCG TTCTAGCAACAGACGGTCTTTGGGATGAGCTCTCTAATACCGAAGTGGTGTCTCTCGTAGCAGGTCACCTCCAGG GCCTAAAGGGCAATGTCCCAAAATCCAACCTCCCCTCCCTCGTACACACAACGATAGGTGAAGCTTCTGGTATCG ATGGAAAATCAGTCTCGACTCAAGAACACAAGGAACGAGCTGCAAAGGCTGGCAATTGGGCATTCAAGGATGA |