Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|065860
Gene name
Locationscaffold_4:109504..110629
Strand-
Gene length (bp)1125
Transcript length (bp)1005
Coding sequence length (bp)1005
Protein length (aa) 335

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 171 193 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|065860
MLLPLFFVLFQLVSWTQCRQNITLDDNDTKLQYTGGWGQSASTDLDYGGSHALTSNTTAEAVLQFTGVAVYFMSP
LWPYAVSTALTLDSRPTITVDLTDHNTPDTGGGIETVSSSVVWSAENLQNTNHTLRISVGRGELFAIVDGIIYTV
LDPGESETGASGDRHNRVVIIVLATLLGILGLLLLIIIIWLCLRKQNSSGSRTRRRSLTTSEKWGGAAHDDASVA
DPALRGSLQSPPLSPSTAPHTLPPPSRPDSNYNPRETTVWSTSSVGGPGVPNMTGVGASARNSNAFSSHHGDPTH
STSHFAMGSQGDFADPHETRPYLNPNRGTRLPNI*
Coding >AgabiH97|065860
ATGCTTCTCCCTCTCTTCTTCGTGCTCTTTCAACTTGTATCATGGACACAATGCCGACAGAATATCACTCTGGAC
GATAATGATACCAAGCTCCAGTATACAGGTGGATGGGGTCAATCCGCATCAACTGATCTCGACTACGGTGGATCA
CATGCTTTGACGTCGAACACGACGGCAGAGGCAGTATTACAGTTCACTGGTGTTGCCGTATATTTTATGTCGCCC
TTATGGCCGTACGCGGTGTCGACGGCACTTACACTGGATTCTCGTCCAACGATTACCGTCGATCTTACAGATCAT
AATACCCCAGATACGGGAGGGGGTATAGAAACTGTTTCATCCAGTGTCGTGTGGAGTGCAGAAAATCTCCAAAAT
ACGAACCACACCCTCCGGATCTCCGTTGGAAGAGGCGAATTGTTCGCCATAGTTGATGGAATCATATACACTGTT
CTAGATCCCGGTGAATCAGAGACTGGTGCTTCTGGTGATCGCCACAATCGAGTTGTCATCATCGTACTGGCCACA
TTACTGGGCATCCTTGGTCTCCTTCTGCTTATCATCATCATATGGCTATGCCTCCGAAAACAAAACTCATCAGGT
TCGAGGACCAGGAGAAGATCATTAACGACTTCAGAAAAGTGGGGGGGTGCTGCACACGACGATGCTTCAGTCGCC
GACCCAGCACTTCGCGGCTCGCTTCAGAGTCCGCCCTTGAGCCCTTCGACGGCACCGCACACACTCCCGCCACCG
AGTAGGCCTGACAGCAACTATAATCCGCGAGAGACCACCGTATGGTCTACATCATCAGTTGGGGGTCCCGGAGTT
CCAAATATGACTGGTGTGGGCGCCAGTGCGAGGAATTCAAATGCCTTTAGCTCTCACCACGGTGATCCGACGCAC
TCGACGAGCCACTTCGCAATGGGATCTCAAGGAGATTTTGCAGATCCTCACGAGACACGACCTTACTTAAACCCC
AACCGCGGAACAAGGCTTCCCAATATCTGA
Transcript >AgabiH97|065860
ATGCTTCTCCCTCTCTTCTTCGTGCTCTTTCAACTTGTATCATGGACACAATGCCGACAGAATATCACTCTGGAC
GATAATGATACCAAGCTCCAGTATACAGGTGGATGGGGTCAATCCGCATCAACTGATCTCGACTACGGTGGATCA
CATGCTTTGACGTCGAACACGACGGCAGAGGCAGTATTACAGTTCACTGGTGTTGCCGTATATTTTATGTCGCCC
TTATGGCCGTACGCGGTGTCGACGGCACTTACACTGGATTCTCGTCCAACGATTACCGTCGATCTTACAGATCAT
AATACCCCAGATACGGGAGGGGGTATAGAAACTGTTTCATCCAGTGTCGTGTGGAGTGCAGAAAATCTCCAAAAT
ACGAACCACACCCTCCGGATCTCCGTTGGAAGAGGCGAATTGTTCGCCATAGTTGATGGAATCATATACACTGTT
CTAGATCCCGGTGAATCAGAGACTGGTGCTTCTGGTGATCGCCACAATCGAGTTGTCATCATCGTACTGGCCACA
TTACTGGGCATCCTTGGTCTCCTTCTGCTTATCATCATCATATGGCTATGCCTCCGAAAACAAAACTCATCAGGT
TCGAGGACCAGGAGAAGATCATTAACGACTTCAGAAAAGTGGGGGGGTGCTGCACACGACGATGCTTCAGTCGCC
GACCCAGCACTTCGCGGCTCGCTTCAGAGTCCGCCCTTGAGCCCTTCGACGGCACCGCACACACTCCCGCCACCG
AGTAGGCCTGACAGCAACTATAATCCGCGAGAGACCACCGTATGGTCTACATCATCAGTTGGGGGTCCCGGAGTT
CCAAATATGACTGGTGTGGGCGCCAGTGCGAGGAATTCAAATGCCTTTAGCTCTCACCACGGTGATCCGACGCAC
TCGACGAGCCACTTCGCAATGGGATCTCAAGGAGATTTTGCAGATCCTCACGAGACACGACCTTACTTAAACCCC
AACCGCGGAACAAGGCTTCCCAATATCTGA
Gene >AgabiH97|065860
ATGCTTCTCCCTCTCTTCTTCGTGCTCTTTCAACTTGTATCATGGACACAATGCCGACAGAATATCACTCTGGAC
GATAATGATACCAAGCTCCAGTATACAGGTGGATGGGGTCAATCCGCATCAACTGATCTCGACTACGGTGGATCA
CATGCTTTGACGTCGAACACGACGGCAGAGGCAGTATTACAGTTCACTGGTGAATTTCCTTTTGCTTTAAGAATG
AACGATCACAGACTGACATCCACGTAACTCAGGTGTTGCCGTATATTTTATGTCGCCCTTATGGCCGTACGCGGT
GTCGACGGCACTTACACTGGATTCTCGTCCAACGATTACCGTCGATCTTACAGATCATAATACCCCAGATACGGG
AGGGGGTATAGAAACTGTTTCATCCAGTGTCGTGTGGAGTGCAGAAAATCTCCAAAATACGAACCACACCCTCCG
GATCTCCGTTGGAAGAGGCGAATTGTTCGCCATAGTTGATGGAATCATGTACGTTGACATTGCGCCTGTTCTCAT
CACGTTTACTTACGTCTTCCTTTTCCTCCCCGCAGATACACTGTTCTAGATCCCGGTGAATCAGAGACTGGTGCT
TCTGGTGATCGCCACAATCGAGTTGTCATCATCGTACTGGCCACATTACTGGGCATCCTTGGTCTCCTTCTGCTT
ATCATCATCATATGGCTATGCCTCCGAAAACAAAACTCATCAGGTTCGAGGACCAGGAGAAGATCATTAACGACT
TCAGAAAAGTGGGGGGGTGCTGCACACGACGATGCTTCAGTCGCCGACCCAGCACTTCGCGGCTCGCTTCAGAGT
CCGCCCTTGAGCCCTTCGACGGCACCGCACACACTCCCGCCACCGAGTAGGCCTGACAGCAACTATAATCCGCGA
GAGACCACCGTATGGTCTACATCATCAGTTGGGGGTCCCGGAGTTCCAAATATGACTGGTGTGGGCGCCAGTGCG
AGGAATTCAAATGCCTTTAGCTCTCACCACGGTGATCCGACGCACTCGACGAGCCACTTCGCAATGGGATCTCAA
GGAGATTTTGCAGATCCTCACGAGACACGACCTTACTTAAACCCCAACCGCGGAACAAGGCTTCCCAATATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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