Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|065830
Gene name
Locationscaffold_4:99358..100812
Strand-
Gene length (bp)1454
Transcript length (bp)1347
Coding sequence length (bp)1347
Protein length (aa) 449

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 194 216 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|065830
MVSSRTALLILLARCFVPSLAQVNITVDDGDLAAIAYTGTWISSSSPLDAGGSHRLGEDDGVLARFTFTGTAIYF
MSPLWPYEVFTQLQLDSQPPVQLNLSDPNLAVPSQTGEETVQSEIVWGKADLPNVSHTLQISKAPGRPYAIVDTL
IYTIPDSTLPSSSEPPSSSSTTPADSSATSPPVKESSQSSLPVLTIALTTGIGSLGLCLVAVAFWICCRRRQRRK
AENWNSNESHPPLATIPPEGSLSPETAHGFKNTSWSGSNFQMATSLAPLPSNPQHLTYQPLEIERDFNPYVHPER
AERIHQQPSDLYQRGTLSYAPTSLSTITEKSTTGTGAAGSSPVSLPSTDLSYYTPGSQSIGAGAARLSYASDTSP
GVVSGVPGHQHQTQPHLYTNGSIEQLRSPGSFGSLSHEVAKPSKLRNGKNVMVAVNRVEDAGEGSRPPAYTPR*
Coding >AgabiH97|065830
ATGGTCTCCTCCCGCACAGCGCTGTTGATACTTCTTGCTCGCTGTTTCGTTCCTTCTCTCGCCCAAGTCAACATC
ACAGTTGACGATGGTGACCTGGCAGCTATTGCCTACACTGGAACATGGATCTCGTCTTCATCGCCACTTGACGCG
GGTGGGTCTCATAGACTAGGAGAGGACGATGGCGTGCTCGCTAGATTCACGTTCACTGGCACTGCTATCTACTTT
ATGTCGCCTCTTTGGCCTTATGAAGTGTTTACACAGTTGCAGTTGGATTCGCAACCACCCGTTCAGCTCAACTTA
TCGGATCCTAACCTTGCAGTTCCCTCGCAGACTGGCGAAGAAACTGTACAAAGTGAAATCGTGTGGGGGAAGGCA
GATCTTCCAAACGTCTCTCACACTCTCCAAATTTCGAAGGCTCCAGGTCGACCATATGCCATAGTTGACACTTTA
ATTTATACCATACCTGATTCAACCTTGCCATCATCATCCGAACCCCCATCATCATCCAGTACAACGCCGGCCGAC
TCGTCTGCTACATCTCCACCGGTCAAAGAGTCTTCTCAAAGCTCGCTTCCCGTTCTGACTATTGCATTAACGACT
GGTATTGGCTCCCTTGGGCTTTGTTTGGTCGCCGTCGCGTTCTGGATCTGCTGTAGAAGAAGACAGCGACGTAAA
GCAGAAAACTGGAATAGTAATGAGAGTCACCCTCCCCTTGCAACGATCCCACCAGAGGGTTCATTATCACCTGAA
ACAGCACATGGTTTCAAGAATACTTCATGGTCTGGTTCTAATTTCCAAATGGCCACTTCGTTGGCTCCTTTACCT
TCCAATCCGCAGCATCTCACCTACCAGCCGCTCGAAATTGAACGGGATTTCAATCCTTACGTCCACCCCGAGCGT
GCGGAAAGGATACACCAACAACCTTCCGACCTATATCAGAGAGGTACCCTTTCATACGCCCCAACATCATTGTCG
ACAATTACGGAAAAATCGACAACTGGTACTGGAGCGGCAGGTTCTTCTCCAGTTTCTTTGCCTTCGACAGACCTC
AGCTACTATACACCTGGATCACAGAGTATCGGGGCTGGCGCTGCGCGACTGTCTTACGCCAGCGATACTTCCCCC
GGCGTTGTGAGCGGTGTGCCTGGGCATCAGCATCAAACTCAGCCTCATCTCTATACGAATGGAAGTATTGAGCAG
CTCCGGTCTCCAGGGTCTTTTGGCTCTCTCAGTCACGAGGTGGCGAAGCCAAGTAAATTACGAAATGGGAAGAAT
GTGATGGTTGCTGTTAACAGGGTAGAAGATGCGGGAGAGGGTTCGAGACCTCCCGCTTACACGCCTCGTTAA
Transcript >AgabiH97|065830
ATGGTCTCCTCCCGCACAGCGCTGTTGATACTTCTTGCTCGCTGTTTCGTTCCTTCTCTCGCCCAAGTCAACATC
ACAGTTGACGATGGTGACCTGGCAGCTATTGCCTACACTGGAACATGGATCTCGTCTTCATCGCCACTTGACGCG
GGTGGGTCTCATAGACTAGGAGAGGACGATGGCGTGCTCGCTAGATTCACGTTCACTGGCACTGCTATCTACTTT
ATGTCGCCTCTTTGGCCTTATGAAGTGTTTACACAGTTGCAGTTGGATTCGCAACCACCCGTTCAGCTCAACTTA
TCGGATCCTAACCTTGCAGTTCCCTCGCAGACTGGCGAAGAAACTGTACAAAGTGAAATCGTGTGGGGGAAGGCA
GATCTTCCAAACGTCTCTCACACTCTCCAAATTTCGAAGGCTCCAGGTCGACCATATGCCATAGTTGACACTTTA
ATTTATACCATACCTGATTCAACCTTGCCATCATCATCCGAACCCCCATCATCATCCAGTACAACGCCGGCCGAC
TCGTCTGCTACATCTCCACCGGTCAAAGAGTCTTCTCAAAGCTCGCTTCCCGTTCTGACTATTGCATTAACGACT
GGTATTGGCTCCCTTGGGCTTTGTTTGGTCGCCGTCGCGTTCTGGATCTGCTGTAGAAGAAGACAGCGACGTAAA
GCAGAAAACTGGAATAGTAATGAGAGTCACCCTCCCCTTGCAACGATCCCACCAGAGGGTTCATTATCACCTGAA
ACAGCACATGGTTTCAAGAATACTTCATGGTCTGGTTCTAATTTCCAAATGGCCACTTCGTTGGCTCCTTTACCT
TCCAATCCGCAGCATCTCACCTACCAGCCGCTCGAAATTGAACGGGATTTCAATCCTTACGTCCACCCCGAGCGT
GCGGAAAGGATACACCAACAACCTTCCGACCTATATCAGAGAGGTACCCTTTCATACGCCCCAACATCATTGTCG
ACAATTACGGAAAAATCGACAACTGGTACTGGAGCGGCAGGTTCTTCTCCAGTTTCTTTGCCTTCGACAGACCTC
AGCTACTATACACCTGGATCACAGAGTATCGGGGCTGGCGCTGCGCGACTGTCTTACGCCAGCGATACTTCCCCC
GGCGTTGTGAGCGGTGTGCCTGGGCATCAGCATCAAACTCAGCCTCATCTCTATACGAATGGAAGTATTGAGCAG
CTCCGGTCTCCAGGGTCTTTTGGCTCTCTCAGTCACGAGGTGGCGAAGCCAAGTAAATTACGAAATGGGAAGAAT
GTGATGGTTGCTGTTAACAGGGTAGAAGATGCGGGAGAGGGTTCGAGACCTCCCGCTTACACGCCTCGTTAA
Gene >AgabiH97|065830
ATGGTCTCCTCCCGCACAGCGCTGTTGATACTTCTTGCTCGCTGTTTCGTTCCTTCTCTCGCCCAAGTCAACATC
ACAGTTGACGATGGTGACCTGGCAGCTATTGCCTACACTGGAACATGGATCTCGTCTTCATCGCCACTTGACGCG
GGTGGGTCTCATAGACTAGGAGAGGACGATGGCGTGCTCGCTAGATTCACGTTCACTGGTAAGATTCAATTTCTT
CTGCGTCCACTGATCCCACTCAATGAGCGTTCTAGGCACTGCTATCTACTTTATGTCGCCTCTTTGGCCTTATGA
AGTGTTTACACAGTTGCAGTTGGATTCGCAACCACCCGTTCAGCTCAACTTATCGGATCCTAACCTTGCAGTTCC
CTCGCAGACTGGCGAAGAAACTGTACAAAGTGAAATCGTGTGGGGGAAGGCAGATCTTCCAAACGTCTCTCACAC
TCTCCAAATTTCGAAGGCTCCAGGTCGACCATATGCCATAGTTGACACTTTAATGTGAGCAGGACCCTCGAAATC
ATTCAAACCAGCTTCACTGATGACCCGTCTATAGTTATACCATACCTGATTCAACCTTGCCATCATCATCCGAAC
CCCCATCATCATCCAGTACAACGCCGGCCGACTCGTCTGCTACATCTCCACCGGTCAAAGAGTCTTCTCAAAGCT
CGCTTCCCGTTCTGACTATTGCATTAACGACTGGTATTGGCTCCCTTGGGCTTTGTTTGGTCGCCGTCGCGTTCT
GGATCTGCTGTAGAAGAAGACAGCGACGTAAAGCAGAAAACTGGAATAGTAATGAGAGTCACCCTCCCCTTGCAA
CGATCCCACCAGAGGGTTCATTATCACCTGAAACAGCACATGGTTTCAAGAATACTTCATGGTCTGGTTCTAATT
TCCAAATGGCCACTTCGTTGGCTCCTTTACCTTCCAATCCGCAGCATCTCACCTACCAGCCGCTCGAAATTGAAC
GGGATTTCAATCCTTACGTCCACCCCGAGCGTGCGGAAAGGATACACCAACAACCTTCCGACCTATATCAGAGAG
GTACCCTTTCATACGCCCCAACATCATTGTCGACAATTACGGAAAAATCGACAACTGGTACTGGAGCGGCAGGTT
CTTCTCCAGTTTCTTTGCCTTCGACAGACCTCAGCTACTATACACCTGGATCACAGAGTATCGGGGCTGGCGCTG
CGCGACTGTCTTACGCCAGCGATACTTCCCCCGGCGTTGTGAGCGGTGTGCCTGGGCATCAGCATCAAACTCAGC
CTCATCTCTATACGAATGGAAGTATTGAGCAGCTCCGGTCTCCAGGGTCTTTTGGCTCTCTCAGTCACGAGGTGG
CGAAGCCAAGTAAATTACGAAATGGGAAGAATGTGATGGTTGCTGTTAACAGGGTAGAAGATGCGGGAGAGGGTT
CGAGACCTCCCGCTTACACGCCTCGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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