Protein ID | AgabiH97|065200 |
Gene name | |
Location | scaffold_3:3045966..3047623 |
Strand | - |
Gene length (bp) | 1657 |
Transcript length (bp) | 1335 |
Coding sequence length (bp) | 1335 |
Protein length (aa) | 445 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01328 | Peroxidase_2 | Peroxidase, family 2 | 1.9E-47 | 133 | 350 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|B9W4V6|APO1_AGRAE | Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 | 77 | 411 | 4.0E-117 |
sp|B9W4V8|APO1_COPRA | Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 | 115 | 348 | 1.0E-71 |
sp|Q00668|STCC_EMENI | Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 | 139 | 343 | 7.0E-21 |
sp|P04963|PRXC_LEPFU | Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 | 134 | 286 | 6.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004601 | peroxidase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0016491 | oxidoreductase activity | No |
GO:0016209 | antioxidant activity | No |
GO:0003824 | catalytic activity | No |
GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 42 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 64 | 86 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
Casing | Casing mycelium | 23.11 | 10.97 | 35.25 |
Initials | Initials knots | 22.98 | 12.65 | 33.31 |
Pileal_Stipeal_center | Stage I stipe center | 6.90 | 3.18 | 10.63 |
Pileal_Stipeal_shell | Stage I stipe shell | 6.81 | 3.14 | 10.47 |
DIF_stipe_center | Stage II stipe center | 6.24 | 2.86 | 9.61 |
DIF_stipe_shell | Stage II stipe shell | 6.91 | 3.24 | 10.59 |
DIF_stipe_skin | Stage II stipe skin | 8.13 | 3.89 | 12.37 |
DIF_cap_skin | Stage II cap skin | 4.94 | 2.20 | 7.68 |
DIF_cap_tissue | Stage II cap tissue | 6.19 | 2.85 | 9.54 |
DIF_gill_tissue | Stage II gill tissue | 6.17 | 2.83 | 9.52 |
YFB_stipe_center | Young fruiting body stipe center | 6.43 | 2.95 | 9.90 |
YFB_stipe_shell | Young fruiting body stipe shell | 6.48 | 2.99 | 9.96 |
YFB_stipe_skin | Young fruiting body stipe skin | 6.68 | 3.09 | 10.27 |
YFB_cap_skin | Young fruiting body cap skin | 5.68 | 2.58 | 8.77 |
YFB_cap_tissue | Young fruiting body cap tissue | 6.45 | 2.97 | 9.93 |
YFB_gill_tissue | Young fruiting body gill tissue | 6.68 | 3.13 | 10.24 |
YFB_veil | Young fruiting body veil | 6.56 | 3.03 | 10.10 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
Casing | DIF_gill_tissue | 0.000613 | yes |
Casing | YFB_stipe_center | 0.000613 | yes |
Casing | YFB_stipe_shell | 0.000613 | yes |
Casing | YFB_stipe_skin | 0.000613 | yes |
Casing | YFB_cap_skin | 0.000613 | yes |
Casing | YFB_cap_tissue | 0.000613 | yes |
Casing | YFB_gill_tissue | 0.000613 | yes |
Casing | YFB_veil | 0.000613 | yes |
Casing | Initials | 0.991817 | no |
Casing | Pileal_Stipeal_center | 0.000613 | yes |
Casing | Pileal_Stipeal_shell | 0.000613 | yes |
Casing | DIF_stipe_center | 0.000613 | yes |
Casing | DIF_stipe_shell | 0.000613 | yes |
Casing | DIF_stipe_skin | 0.001140 | yes |
Casing | DIF_cap_skin | 0.000613 | yes |
Casing | DIF_cap_tissue | 0.000613 | yes |
DIF_gill_tissue | YFB_stipe_center | 0.957035 | no |
DIF_gill_tissue | YFB_stipe_shell | 0.949062 | no |
DIF_gill_tissue | YFB_stipe_skin | 0.909006 | no |
DIF_gill_tissue | YFB_cap_skin | 0.903694 | no |
DIF_gill_tissue | YFB_cap_tissue | 0.952698 | no |
DIF_gill_tissue | YFB_gill_tissue | 0.906908 | no |
DIF_gill_tissue | YFB_veil | 0.930817 | no |
YFB_stipe_center | YFB_stipe_shell | 0.991415 | no |
YFB_stipe_center | YFB_stipe_skin | 0.957445 | no |
YFB_stipe_center | YFB_cap_skin | 0.848694 | no |
YFB_stipe_center | YFB_cap_tissue | 0.995372 | no |
YFB_stipe_center | YFB_gill_tissue | 0.956221 | no |
YFB_stipe_center | YFB_veil | 0.977825 | no |
YFB_stipe_shell | YFB_stipe_skin | 0.965931 | no |
YFB_stipe_shell | YFB_cap_skin | 0.836185 | no |
YFB_stipe_shell | YFB_cap_tissue | 0.995251 | no |
YFB_stipe_shell | YFB_gill_tissue | 0.964775 | no |
YFB_stipe_shell | YFB_veil | 0.984848 | no |
YFB_stipe_skin | YFB_cap_skin | 0.786022 | no |
YFB_stipe_skin | YFB_cap_tissue | 0.963153 | no |
YFB_stipe_skin | YFB_gill_tissue | 0.998290 | no |
YFB_stipe_skin | YFB_veil | 0.981535 | no |
YFB_cap_skin | YFB_cap_tissue | 0.839959 | no |
YFB_cap_skin | YFB_gill_tissue | 0.777716 | no |
YFB_cap_skin | YFB_veil | 0.811592 | no |
YFB_cap_tissue | YFB_gill_tissue | 0.960768 | no |
YFB_cap_tissue | YFB_veil | 0.981370 | no |
YFB_gill_tissue | YFB_veil | 0.980668 | no |
Initials | DIF_gill_tissue | 0.000613 | yes |
Initials | YFB_stipe_center | 0.000613 | yes |
Initials | YFB_stipe_shell | 0.000613 | yes |
Initials | YFB_stipe_skin | 0.000613 | yes |
Initials | YFB_cap_skin | 0.000613 | yes |
Initials | YFB_cap_tissue | 0.000613 | yes |
Initials | YFB_gill_tissue | 0.000613 | yes |
Initials | YFB_veil | 0.000613 | yes |
Initials | Pileal_Stipeal_center | 0.000613 | yes |
Initials | Pileal_Stipeal_shell | 0.000613 | yes |
Initials | DIF_stipe_center | 0.000613 | yes |
Initials | DIF_stipe_shell | 0.000613 | yes |
Initials | DIF_stipe_skin | 0.000613 | yes |
Initials | DIF_cap_skin | 0.000613 | yes |
Initials | DIF_cap_tissue | 0.000613 | yes |
Pileal_Stipeal_center | DIF_gill_tissue | 0.865325 | no |
Pileal_Stipeal_center | YFB_stipe_center | 0.921371 | no |
Pileal_Stipeal_center | YFB_stipe_shell | 0.929808 | no |
Pileal_Stipeal_center | YFB_stipe_skin | 0.963335 | no |
Pileal_Stipeal_center | YFB_cap_skin | 0.729033 | no |
Pileal_Stipeal_center | YFB_cap_tissue | 0.923706 | no |
Pileal_Stipeal_center | YFB_gill_tissue | 0.963745 | no |
Pileal_Stipeal_center | YFB_veil | 0.944464 | no |
Pileal_Stipeal_center | Pileal_Stipeal_shell | 0.983591 | no |
Pileal_Stipeal_center | DIF_stipe_center | 0.878978 | no |
Pileal_Stipeal_center | DIF_stipe_shell | 0.998233 | no |
Pileal_Stipeal_center | DIF_stipe_skin | 0.779500 | no |
Pileal_Stipeal_center | DIF_cap_skin | 0.480947 | no |
Pileal_Stipeal_center | DIF_cap_tissue | 0.870930 | no |
Pileal_Stipeal_shell | DIF_gill_tissue | 0.884981 | no |
Pileal_Stipeal_shell | YFB_stipe_center | 0.937173 | no |
Pileal_Stipeal_shell | YFB_stipe_shell | 0.946502 | no |
Pileal_Stipeal_shell | YFB_stipe_skin | 0.979347 | no |
Pileal_Stipeal_shell | YFB_cap_skin | 0.751764 | no |
Pileal_Stipeal_shell | YFB_cap_tissue | 0.940838 | no |
Pileal_Stipeal_shell | YFB_gill_tissue | 0.980027 | no |
Pileal_Stipeal_shell | YFB_veil | 0.960199 | no |
Pileal_Stipeal_shell | DIF_stipe_center | 0.899599 | no |
Pileal_Stipeal_shell | DIF_stipe_shell | 0.982650 | no |
Pileal_Stipeal_shell | DIF_stipe_skin | 0.753040 | no |
Pileal_Stipeal_shell | DIF_cap_skin | 0.500293 | no |
Pileal_Stipeal_shell | DIF_cap_tissue | 0.890037 | no |
DIF_stipe_center | DIF_gill_tissue | 0.988868 | no |
DIF_stipe_center | YFB_stipe_center | 0.968612 | no |
DIF_stipe_center | YFB_stipe_shell | 0.960307 | no |
DIF_stipe_center | YFB_stipe_skin | 0.923755 | no |
DIF_stipe_center | YFB_cap_skin | 0.892280 | no |
DIF_stipe_center | YFB_cap_tissue | 0.964201 | no |
DIF_stipe_center | YFB_gill_tissue | 0.922099 | no |
DIF_stipe_center | YFB_veil | 0.945195 | no |
DIF_stipe_center | DIF_stipe_shell | 0.874992 | no |
DIF_stipe_center | DIF_stipe_skin | 0.599180 | no |
DIF_stipe_center | DIF_cap_skin | 0.671630 | no |
DIF_stipe_center | DIF_cap_tissue | 0.991834 | no |
DIF_stipe_shell | DIF_gill_tissue | 0.859917 | no |
DIF_stipe_shell | YFB_stipe_center | 0.917201 | no |
DIF_stipe_shell | YFB_stipe_shell | 0.925909 | no |
DIF_stipe_shell | YFB_stipe_skin | 0.961376 | no |
DIF_stipe_shell | YFB_cap_skin | 0.720783 | no |
DIF_stipe_shell | YFB_cap_tissue | 0.919278 | no |
DIF_stipe_shell | YFB_gill_tissue | 0.961797 | no |
DIF_stipe_shell | YFB_veil | 0.941897 | no |
DIF_stipe_shell | DIF_stipe_skin | 0.775797 | no |
DIF_stipe_shell | DIF_cap_skin | 0.464218 | no |
DIF_stipe_shell | DIF_cap_tissue | 0.865247 | no |
DIF_stipe_skin | DIF_gill_tissue | 0.576211 | no |
DIF_stipe_skin | YFB_stipe_center | 0.651629 | no |
DIF_stipe_skin | YFB_stipe_shell | 0.665387 | no |
DIF_stipe_skin | YFB_stipe_skin | 0.721418 | no |
DIF_stipe_skin | YFB_cap_skin | 0.419482 | no |
DIF_stipe_skin | YFB_cap_tissue | 0.660639 | no |
DIF_stipe_skin | YFB_gill_tissue | 0.714657 | no |
DIF_stipe_skin | YFB_veil | 0.689117 | no |
DIF_stipe_skin | DIF_cap_skin | 0.208566 | no |
DIF_stipe_skin | DIF_cap_tissue | 0.579205 | no |
DIF_cap_skin | DIF_gill_tissue | 0.682919 | no |
DIF_cap_skin | YFB_stipe_center | 0.605439 | no |
DIF_cap_skin | YFB_stipe_shell | 0.591605 | no |
DIF_cap_skin | YFB_stipe_skin | 0.534082 | no |
DIF_cap_skin | YFB_cap_skin | 0.824432 | no |
DIF_cap_skin | YFB_cap_tissue | 0.600946 | no |
DIF_cap_skin | YFB_gill_tissue | 0.517197 | no |
DIF_cap_skin | YFB_veil | 0.563134 | no |
DIF_cap_skin | DIF_cap_tissue | 0.674462 | no |
DIF_cap_tissue | DIF_gill_tissue | 0.995671 | no |
DIF_cap_tissue | YFB_stipe_center | 0.960669 | no |
DIF_cap_tissue | YFB_stipe_shell | 0.952505 | no |
DIF_cap_tissue | YFB_stipe_skin | 0.914054 | no |
DIF_cap_tissue | YFB_cap_skin | 0.900614 | no |
DIF_cap_tissue | YFB_cap_tissue | 0.956385 | no |
DIF_cap_tissue | YFB_gill_tissue | 0.912578 | no |
DIF_cap_tissue | YFB_veil | 0.936068 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >AgabiH97|065200 MSNAYVTLELIIDEYDPASPCRKPSAAYDVGPLGYANFAFAKLYQIRKGIKGCLAREGKSVRCSVMVGFLSFVAL AVALAAPAAAFPAHGSLAGLSRQELDDAMSGFGEYTRPPPPPGPLEYGGVKLVNDADHPFIAPGEGDIRGPCPAL NTLANHGYISRNGIESPSNIVRGAMEGFNMNNDLSKFTCYAAFMVNGNLITDLVSIGEKSPKTGPDPKEQPMATI GGLNTHNVFEGDSSMTRADFYDGGDVESFNETLFQGFIEYSNRFGGGRYNLTAAGQFRLKRIQDGVQHNPTFTIV APRLFSAYSEAVNPINMWVDGRQDDGQLRLDHARSFFEAARFPDDFHRAARPMSADNEAVVHAIHPIEPGANIAG INTYTVDRNAPRLDDKCGIFEYHVNHTLRTLYPNPTGVAPKSSLTVDSRMAKATTTTRPPITPKSSSPS* |
Coding | >AgabiH97|065200 ATGTCAAACGCATACGTCACTCTCGAACTGATTATTGACGAATATGACCCCGCCTCACCCTGCAGAAAACCGAGT GCGGCTTACGACGTCGGTCCTTTAGGCTACGCGAACTTTGCGTTTGCGAAACTGTATCAAATCAGGAAAGGTATA AAAGGATGCCTGGCAAGAGAAGGAAAATCAGTTCGCTGTTCAGTCATGGTCGGCTTCCTATCCTTCGTTGCGCTC GCAGTGGCTTTGGCTGCTCCCGCCGCCGCATTCCCAGCACATGGTTCATTGGCTGGCTTGTCGAGGCAAGAATTG GACGATGCCATGAGTGGCTTCGGCGAATACACAAGGCCACCACCACCCCCAGGACCCCTCGAGTACGGTGGTGTT AAGTTGGTCAACGATGCCGACCATCCTTTCATTGCTCCGGGTGAAGGCGACATCCGTGGTCCTTGCCCGGCTTTG AACACTCTCGCCAACCACGGTTACATCAGCCGCAACGGTATTGAGTCACCATCTAACATCGTCCGTGGTGCCATG GAAGGTTTCAACATGAACAACGACTTGTCCAAGTTCACCTGTTACGCTGCCTTCATGGTCAACGGAAACTTGATC ACTGACTTGGTCAGTATTGGTGAGAAGTCCCCGAAGACCGGACCAGACCCAAAAGAACAACCGATGGCGACTATT GGTGGTTTGAACACTCACAACGTGTTCGAGGGTGACAGTTCTATGACTCGCGCTGATTTCTATGATGGTGGTGAT GTCGAGAGCTTCAACGAGACCCTTTTCCAAGGATTCATTGAATACAGCAACAGGTTCGGTGGTGGAAGGTACAAC CTTACCGCCGCTGGCCAGTTCCGTCTCAAACGTATCCAAGATGGTGTCCAACACAACCCGACCTTCACCATCGTC GCTCCCCGACTCTTCTCTGCTTACTCCGAAGCCGTCAACCCCATCAACATGTGGGTCGATGGACGCCAAGACGAT GGTCAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAAGCCGCACGTTTCCCCGATGACTTCCACAGGGCTGCA CGCCCCATGAGCGCCGACAACGAGGCCGTTGTACACGCTATCCACCCCATTGAGCCAGGAGCAAACATCGCCGGT ATCAACACTTACACTGTTGACCGTAATGCACCCAGACTTGACGACAAGTGCGGTATCTTCGAGTACCACGTCAAC CACACTCTCCGCACTCTCTACCCCAACCCGACCGGGGTTGCACCGAAATCTTCCCTTACGGTAGATTCGAGGATG GCGAAAGCAACAACTACTACGCGACCCCCGATTACCCCGAAGTCGAGCTCCCCGAGCTAG |
Transcript | >AgabiH97|065200 ATGTCAAACGCATACGTCACTCTCGAACTGATTATTGACGAATATGACCCCGCCTCACCCTGCAGAAAACCGAGT GCGGCTTACGACGTCGGTCCTTTAGGCTACGCGAACTTTGCGTTTGCGAAACTGTATCAAATCAGGAAAGGTATA AAAGGATGCCTGGCAAGAGAAGGAAAATCAGTTCGCTGTTCAGTCATGGTCGGCTTCCTATCCTTCGTTGCGCTC GCAGTGGCTTTGGCTGCTCCCGCCGCCGCATTCCCAGCACATGGTTCATTGGCTGGCTTGTCGAGGCAAGAATTG GACGATGCCATGAGTGGCTTCGGCGAATACACAAGGCCACCACCACCCCCAGGACCCCTCGAGTACGGTGGTGTT AAGTTGGTCAACGATGCCGACCATCCTTTCATTGCTCCGGGTGAAGGCGACATCCGTGGTCCTTGCCCGGCTTTG AACACTCTCGCCAACCACGGTTACATCAGCCGCAACGGTATTGAGTCACCATCTAACATCGTCCGTGGTGCCATG GAAGGTTTCAACATGAACAACGACTTGTCCAAGTTCACCTGTTACGCTGCCTTCATGGTCAACGGAAACTTGATC ACTGACTTGGTCAGTATTGGTGAGAAGTCCCCGAAGACCGGACCAGACCCAAAAGAACAACCGATGGCGACTATT GGTGGTTTGAACACTCACAACGTGTTCGAGGGTGACAGTTCTATGACTCGCGCTGATTTCTATGATGGTGGTGAT GTCGAGAGCTTCAACGAGACCCTTTTCCAAGGATTCATTGAATACAGCAACAGGTTCGGTGGTGGAAGGTACAAC CTTACCGCCGCTGGCCAGTTCCGTCTCAAACGTATCCAAGATGGTGTCCAACACAACCCGACCTTCACCATCGTC GCTCCCCGACTCTTCTCTGCTTACTCCGAAGCCGTCAACCCCATCAACATGTGGGTCGATGGACGCCAAGACGAT GGTCAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAAGCCGCACGTTTCCCCGATGACTTCCACAGGGCTGCA CGCCCCATGAGCGCCGACAACGAGGCCGTTGTACACGCTATCCACCCCATTGAGCCAGGAGCAAACATCGCCGGT ATCAACACTTACACTGTTGACCGTAATGCACCCAGACTTGACGACAAGTGCGGTATCTTCGAGTACCACGTCAAC CACACTCTCCGCACTCTCTACCCCAACCCGACCGGGGTTGCACCGAAATCTTCCCTTACGGTAGATTCGAGGATG GCGAAAGCAACAACTACTACGCGACCCCCGATTACCCCGAAGTCGAGCTCCCCGAGCTAG |
Gene | >AgabiH97|065200 ATGTCAAACGCATACGTCACTCTCGAACTGATTATTGACGAATATGACCCCGCCTCACCCTGCAGAAAACCGAGT GCGGCTGTATGTCAGAGAGTACTTGATGTCTCGAACCTTTCTCACACCCGGCAGTACGACGTCGGTCCTTTAGGC TACGCGAACTTTGCGTTTGCGAAACTGTATCAAATCAGGAAAGGTATAAAAGGATGCCTGGCAAGAGAAGGAAAA TCAGTTCGCTGTTCAGTCATGGTCGGCTTCCTATCCTTCGTTGCGCTCGCAGTGGCTTTGGCTGCTCCCGCCGCC GCATTCCCAGCACATGGTTCATTGGCTGGCTTGTCGAGGCAAGAATTGGACGATGCCATGAGTGGCTTCGGCGAA TACACAAGGCCACCACCACCCCCAGGACCCCTCGAGTACGGTGGTGTTAAGTTGGTCAACGATGCCGACCATCCT TTCATTGCTCCGGGTGAAGGCGACATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCACGGTGTACGT ACCATTTTTCTAGTTTGCTTCTCGGTAACATCTGACCCCAAATTGACAGTACATCAGCCGCAACGGTATTGAGTC ACCATCTAACATCGTCCGTGGTGCCATGGAAGGTCAGTGCTTCAGGTCTTCCTTCACGTCCTTTCGCTGACTTTG AGCAGGTTTCAACATGAACAACGACTTGTCCAAGTTCACCTGTTACGCTGCCTTCATGGTCAACGGAAACTTGAT CACTGACTTGGTCAGTATTGGTGAGAAGTCCCCGAAGACCGGACCAGACCCAAAAGAACAACCGATGGCGACTAT TGGTGGTTTGAACACTCACAACGTGTTCGAGGGTGACAGTTCTATGACTCGCGGTGAGTTTCGCGTATTGCCATA GTTATCCTAATCAAGTGGCTTACTTGGTCTCCAGCTGATTTCTATGATGGTGGTGATGTCGAGAGCTTCAACGAG ACCCTTTTCCAAGGAGTATGTTATCTCCCATATTTTGACGCTTCCAGGATCTGACCACTTCGATCACAGTTCATT GAATACAGCAACAGGTTCGGTGGTGGAAGGTACAACCTTACCGCCGCTGGCCAGTTCCGTCTCAAACGTATCCAA GATGGTGTCCAACACAACCCGACCTTCACCATCGTCGCTCCCCGACTCTTCTCTGCTTACTCCGAAGCCGTCAAC CCCATCAACATGTGGGTCGATGGACGCCAAGACGATGGTCAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAA GCCGCACGTTTCCCCGATGACTTCCACAGGGCTGCACGCCCCATGAGCGCCGACAACGAGGCCGTTGTACACGCT ATCCACCCCATTGAGCCAGGAGCAAACATCGCCGGTATCAACACTTACACTGTTGACCGTAATGCACCCAGACTT GACGACAAGTGCGGTATCTTCGAGTACCACGTCAACCACACTCTCCGCACTCTCTACCCCAACCCGACCGGTAAC TTGTTGGACGCCATCAGGGCCAACATCCACTATTTCTTCACCGCTATGGAGGCTAGGGGTTGCACCGAAATCTTC CCTTACGGTAGATTCGAGGATGGCGAAAGCAACAACTACTACGCGACCCCCGATTACCCCGAAGTCGAGCTCCCC GAGCTAG |