Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|065120
Gene name
Locationscaffold_3:3025847..3026239
Strand-
Gene length (bp)392
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01328 Peroxidase_2 Peroxidase, family 2 8.0E-18 68 111

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|B9W4V6|APO1_AGRAE Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 11 112 6.0E-26
sp|B9W4V8|APO1_COPRA Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 50 112 3.0E-16
sp|P04963|PRXC_LEPFU Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 69 98 3.0E-06

GO

GO Term Description Terminal node
GO:0004601 peroxidase activity Yes
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No
GO:0016209 antioxidant activity No
GO:0003824 catalytic activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|065120
MVGFLSFVTLAIALAAPAAAFPAHGSLAGLSRQELDDAMSGFGEYTRPPPPPGPLEYGGVKLVNDAEHPFIAPGE
GDIRGPCPALNTLANHGYISRNGIESPSNIVRGAMEG*
Coding >AgabiH97|065120
ATGGTCGGCTTCCTATCCTTCGTCACCCTCGCAATCGCGCTGGCTGCTCCCGCTGCCGCATTCCCAGCTCATGGT
TCATTGGCTGGCTTGTCGAGGCAAGAGTTGGACGATGCCATGAGTGGCTTCGGCGAATACACAAGGCCACCACCA
CCCCCAGGACCCCTCGAGTACGGTGGTGTTAAGCTGGTCAACGATGCCGAACATCCTTTCATTGCTCCGGGTGAA
GGCGACATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCACGGTTACATCAGCCGCAATGGTATTGAG
TCTCCTTCTAACATCGTCCGTGGTGCCATGGAAGGTTAG
Transcript >AgabiH97|065120
ATGGTCGGCTTCCTATCCTTCGTCACCCTCGCAATCGCGCTGGCTGCTCCCGCTGCCGCATTCCCAGCTCATGGT
TCATTGGCTGGCTTGTCGAGGCAAGAGTTGGACGATGCCATGAGTGGCTTCGGCGAATACACAAGGCCACCACCA
CCCCCAGGACCCCTCGAGTACGGTGGTGTTAAGCTGGTCAACGATGCCGAACATCCTTTCATTGCTCCGGGTGAA
GGCGACATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCACGGTTACATCAGCCGCAATGGTATTGAG
TCTCCTTCTAACATCGTCCGTGGTGCCATGGAAGGTTAG
Gene >AgabiH97|065120
ATGGTCGGCTTCCTATCCTTCGTCACCCTCGCAATCGCGCTGGCTGCTCCCGCTGCCGCATTCCCAGCTCATGGT
TCATTGGCTGGCTTGTCGAGGCAAGAGTTGGACGATGCCATGAGTGGCTTCGGCGAATACACAAGGCCACCACCA
CCCCCAGGACCCCTCGAGTACGGTGGTGTTAAGCTGGTCAACGATGCCGAACATCCTTTCATTGCTCCGGGTGAA
GGCGACATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCACGGTGTACGTACCATTTTATAGCCTGCT
TCTCGCTAATATCTGACCGCAAATCACAGTACATCAGCCGCAATGGTATTGAGTCTCCTTCTAACATCGTCCGTG
GTGCCATGGAAGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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