Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|065040
Gene name
Locationscaffold_3:3006399..3008027
Strand-
Gene length (bp)1628
Transcript length (bp)1419
Coding sequence length (bp)1419
Protein length (aa) 473

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01328 Peroxidase_2 Peroxidase, family 2 1.1E-47 68 284

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|B9W4V6|APO1_AGRAE Aromatic peroxygenase OS=Agrocybe aegerita GN=APO1 PE=1 SV=1 12 376 5.0E-131
sp|B9W4V8|APO1_COPRA Aromatic peroxygenase (Fragments) OS=Coprinellus radians GN=APO PE=1 SV=2 50 282 4.0E-75
sp|Q00668|STCC_EMENI Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 70 277 5.0E-21
sp|P04963|PRXC_LEPFU Chloroperoxidase OS=Leptoxyphium fumago GN=CPO PE=1 SV=3 69 220 8.0E-07

GO

GO Term Description Terminal node
GO:0004601 peroxidase activity Yes
GO:0003674 molecular_function No
GO:0016491 oxidoreductase activity No
GO:0016209 antioxidant activity No
GO:0003824 catalytic activity No
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|065040
MVGFISFVVLAVALVAPAAAFPAHGSLAGLSRQELDDAMSAFGKYKRPPPPPGPLEYGGVKLVNDAEHPFKPPRK
GDIRGPCPALNTLANHGYISRNGIESPSNIVRAAMEGFNMNNDLAKFTCYAAFIVNGNMVTDLVSIGEKSKKTGP
DPKDQPATIGGLNTHNVFEGDSSMTRADFYDGGDVETFNETLFQGFLEYSYRFGGGRYNLTAAGEYRLKRTQDGI
QNNPTFTIVAPRLFSAYSESVNPINLWVDGRQDDGQLRLDHARSFFEAARYPDDFHRAARPMSADNEAVVHAIHP
LEPGANVAGVNTYTVDRNAPRLDDKCGIFEYHVNTTLRTLYPNPRGNLLDAIRANIHYFYTSIQARGCTEIFPYG
RFEDGKNNAYYAYPDFPEVDLPEYGTFPFPPVDLPPYSDDLVPTSNATASDAPASSAAASSAPASSAAASPEASM
AVSEASMAAPEASMAVPEASSA*
Coding >AgabiH97|065040
ATGGTTGGCTTCATCTCCTTCGTTGTGCTCGCAGTCGCTTTGGTCGCTCCCGCCGCCGCATTCCCAGCACATGGT
TCATTAGCTGGATTGTCGAGGCAAGAATTGGATGATGCCATGAGTGCCTTCGGCAAATACAAGAGACCGCCACCA
CCCCCAGGACCTCTCGAATATGGTGGTGTCAAGCTCGTCAACGATGCCGAACATCCTTTCAAGCCTCCGCGCAAA
GGTGATATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCATGGTTACATCAGCCGCAACGGTATTGAG
TCACCTTCAAACATCGTCCGTGCCGCCATGGAAGGTTTCAACATGAACAACGACTTGGCCAAGTTCACCTGCTAC
GCTGCCTTCATTGTCAACGGAAACATGGTCACCGACTTGGTCAGTATCGGTGAAAAGTCCAAGAAGACTGGACCC
GACCCGAAAGATCAACCGGCGACTATTGGTGGTTTGAACACGCATAACGTGTTTGAGGGTGACAGCTCTATGACT
CGAGCTGATTTCTATGATGGTGGCGATGTCGAGACCTTCAACGAGACCCTCTTCCAAGGATTCCTTGAATACAGC
TACAGATTCGGTGGTGGAAGGTATAACCTTACCGCTGCTGGCGAGTACCGCCTCAAGCGTACTCAAGACGGTATC
CAGAACAACCCCACCTTCACCATCGTCGCTCCCCGACTCTTCTCTGCTTACTCTGAATCCGTCAACCCTATCAAC
TTGTGGGTCGATGGACGCCAAGACGATGGACAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAGGCCGCCCGT
TACCCCGATGACTTCCACAGGGCTGCACGCCCCATGAGCGCTGATAACGAGGCCGTCGTGCATGCTATCCATCCC
CTTGAGCCAGGAGCCAACGTCGCTGGTGTTAACACTTACACTGTGGACCGTAATGCACCCAGACTTGACGACAAG
TGCGGTATCTTCGAGTACCACGTCAACACCACTCTGCGCACGCTCTACCCCAACCCGAGAGGCAACTTGTTGGAC
GCGATCAGGGCCAACATCCACTACTTCTATACCTCGATCCAAGCTAGAGGTTGCACCGAAATCTTCCCCTACGGT
CGATTCGAGGATGGGAAAAACAATGCTTACTACGCGTACCCTGATTTCCCCGAGGTCGATCTCCCCGAATACGGA
ACTTTCCCCTTCCCCCCAGTCGACCTCCCTCCCTACTCTGACGACCTCGTCCCCACATCCAACGCCACTGCATCC
GACGCCCCTGCATCCAGTGCTGCCGCATCCAGTGCCCCCGCATCCAGCGCCGCGGCATCACCTGAAGCATCGATG
GCGGTTTCTGAAGCATCGATGGCGGCTCCTGAAGCATCGATGGCGGTTCCTGAAGCATCTAGCGCCTAA
Transcript >AgabiH97|065040
ATGGTTGGCTTCATCTCCTTCGTTGTGCTCGCAGTCGCTTTGGTCGCTCCCGCCGCCGCATTCCCAGCACATGGT
TCATTAGCTGGATTGTCGAGGCAAGAATTGGATGATGCCATGAGTGCCTTCGGCAAATACAAGAGACCGCCACCA
CCCCCAGGACCTCTCGAATATGGTGGTGTCAAGCTCGTCAACGATGCCGAACATCCTTTCAAGCCTCCGCGCAAA
GGTGATATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCATGGTTACATCAGCCGCAACGGTATTGAG
TCACCTTCAAACATCGTCCGTGCCGCCATGGAAGGTTTCAACATGAACAACGACTTGGCCAAGTTCACCTGCTAC
GCTGCCTTCATTGTCAACGGAAACATGGTCACCGACTTGGTCAGTATCGGTGAAAAGTCCAAGAAGACTGGACCC
GACCCGAAAGATCAACCGGCGACTATTGGTGGTTTGAACACGCATAACGTGTTTGAGGGTGACAGCTCTATGACT
CGAGCTGATTTCTATGATGGTGGCGATGTCGAGACCTTCAACGAGACCCTCTTCCAAGGATTCCTTGAATACAGC
TACAGATTCGGTGGTGGAAGGTATAACCTTACCGCTGCTGGCGAGTACCGCCTCAAGCGTACTCAAGACGGTATC
CAGAACAACCCCACCTTCACCATCGTCGCTCCCCGACTCTTCTCTGCTTACTCTGAATCCGTCAACCCTATCAAC
TTGTGGGTCGATGGACGCCAAGACGATGGACAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAGGCCGCCCGT
TACCCCGATGACTTCCACAGGGCTGCACGCCCCATGAGCGCTGATAACGAGGCCGTCGTGCATGCTATCCATCCC
CTTGAGCCAGGAGCCAACGTCGCTGGTGTTAACACTTACACTGTGGACCGTAATGCACCCAGACTTGACGACAAG
TGCGGTATCTTCGAGTACCACGTCAACACCACTCTGCGCACGCTCTACCCCAACCCGAGAGGCAACTTGTTGGAC
GCGATCAGGGCCAACATCCACTACTTCTATACCTCGATCCAAGCTAGAGGTTGCACCGAAATCTTCCCCTACGGT
CGATTCGAGGATGGGAAAAACAATGCTTACTACGCGTACCCTGATTTCCCCGAGGTCGATCTCCCCGAATACGGA
ACTTTCCCCTTCCCCCCAGTCGACCTCCCTCCCTACTCTGACGACCTCGTCCCCACATCCAACGCCACTGCATCC
GACGCCCCTGCATCCAGTGCTGCCGCATCCAGTGCCCCCGCATCCAGCGCCGCGGCATCACCTGAAGCATCGATG
GCGGTTTCTGAAGCATCGATGGCGGCTCCTGAAGCATCGATGGCGGTTCCTGAAGCATCTAGCGCCTAA
Gene >AgabiH97|065040
ATGGTTGGCTTCATCTCCTTCGTTGTGCTCGCAGTCGCTTTGGTCGCTCCCGCCGCCGCATTCCCAGCACATGGT
TCATTAGCTGGATTGTCGAGGCAAGAATTGGATGATGCCATGAGTGCCTTCGGCAAATACAAGAGACCGCCACCA
CCCCCAGGACCTCTCGAATATGGTGGTGTCAAGCTCGTCAACGATGCCGAACATCCTTTCAAGCCTCCGCGCAAA
GGTGATATCCGTGGTCCTTGCCCGGCTTTGAACACTCTCGCCAACCATGGTGTACGTGCCATTCTTCGACCTTGC
TTCTCGCTTTAATATCTGACCCAATTCACAGTACATCAGCCGCAACGGTATTGAGTCACCTTCAAACATCGTCCG
TGCCGCCATGGAAGGTCAGTGCTTCAGCATTTCCTTCACGTTCATTCGCTGACTTTGCGCAGGTTTCAACATGAA
CAACGACTTGGCCAAGTTCACCTGCTACGCTGCCTTCATTGTCAACGGAAACATGGTCACCGACTTGGTCAGTAT
CGGTGAAAAGTCCAAGAAGACTGGACCCGACCCGAAAGATCAACCGGCGACTATTGGTGGTTTGAACACGCATAA
CGTGTTTGAGGGTGACAGCTCTATGACTCGAGGTGAGTTTCGCGCATCGCCACAGTTATCCTAATCAAATGACTT
ACTTTGCCTCTAGCTGATTTCTATGATGGTGGCGATGTCGAGACCTTCAACGAGACCCTCTTCCAAGGAGTATGT
TGTTTTGTATATTTTGAAGCTTCCAGGATCTGATCACTTCACAGTTCCTTGAATACAGCTACAGATTCGGTGGTG
GAAGGTATAACCTTACCGCTGCTGGCGAGTACCGCCTCAAGCGTACTCAAGACGGTATCCAGAACAACCCCACCT
TCACCATCGTCGCTCCCCGACTCTTCTCTGCTTACTCTGAATCCGTCAACCCTATCAACTTGTGGGTCGATGGAC
GCCAAGACGATGGACAACTCAGGCTCGACCATGCCCGCAGCTTCTTCGAGGCCGCCCGTTACCCCGATGACTTCC
ACAGGGCTGCACGCCCCATGAGCGCTGATAACGAGGCCGTCGTGCATGCTATCCATCCCCTTGAGCCAGGAGCCA
ACGTCGCTGGTGTTAACACTTACACTGTGGACCGTAATGCACCCAGACTTGACGACAAGTGCGGTATCTTCGAGT
ACCACGTCAACACCACTCTGCGCACGCTCTACCCCAACCCGAGAGGCAACTTGTTGGACGCGATCAGGGCCAACA
TCCACTACTTCTATACCTCGATCCAAGCTAGAGGTTGCACCGAAATCTTCCCCTACGGTCGATTCGAGGATGGGA
AAAACAATGCTTACTACGCGTACCCTGATTTCCCCGAGGTCGATCTCCCCGAATACGGAACTTTCCCCTTCCCCC
CAGTCGACCTCCCTCCCTACTCTGACGACCTCGTCCCCACATCCAACGCCACTGCATCCGACGCCCCTGCATCCA
GTGCTGCCGCATCCAGTGCCCCCGCATCCAGCGCCGCGGCATCACCTGAAGCATCGATGGCGGTTTCTGAAGCAT
CGATGGCGGCTCCTGAAGCATCGATGGCGGTTCCTGAAGCATCTAGCGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail