© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | AgabiH97|064840 |
| Gene name | |
| Location | scaffold_3:2964572..2967453 |
| Strand | + |
| Gene length (bp) | 2881 |
| Transcript length (bp) | 1854 |
| Coding sequence length (bp) | 1854 |
| Protein length (aa) | 618 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.9E-38 | 40 | 439 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.7E-07 | 66 | 203 |
| PF06609 | TRI12 | Fungal trichothecene efflux pump (TRI12) | 6.9E-07 | 58 | 316 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09752|FNX1_SCHPO | Multidrug resistance protein fnx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx1 PE=2 SV=2 | 32 | 527 | 1.0E-58 |
| sp|O59726|FNX2_SCHPO | Vacuolar membrane amino acid uptake transporter fnx2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx2 PE=3 SV=1 | 50 | 525 | 6.0E-56 |
| sp|Q04301|VBA1_YEAST | Vacuolar basic amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA1 PE=1 SV=1 | 36 | 457 | 5.0E-46 |
| sp|P38358|VBA2_YEAST | Vacuolar basic amino acid transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA2 PE=1 SV=1 | 71 | 530 | 2.0E-41 |
| sp|B5BP47|YP53_SCHPO | Uncharacterized transporter C460.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.03 PE=3 SV=1 | 42 | 500 | 2.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09752|FNX1_SCHPO | Multidrug resistance protein fnx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx1 PE=2 SV=2 | 32 | 527 | 1.0E-58 |
| sp|O59726|FNX2_SCHPO | Vacuolar membrane amino acid uptake transporter fnx2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx2 PE=3 SV=1 | 50 | 525 | 6.0E-56 |
| sp|Q04301|VBA1_YEAST | Vacuolar basic amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA1 PE=1 SV=1 | 36 | 457 | 5.0E-46 |
| sp|P38358|VBA2_YEAST | Vacuolar basic amino acid transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA2 PE=1 SV=1 | 71 | 530 | 2.0E-41 |
| sp|B5BP47|YP53_SCHPO | Uncharacterized transporter C460.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.03 PE=3 SV=1 | 42 | 500 | 2.0E-40 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 31 | 462 | 1.0E-39 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 31 | 458 | 5.0E-34 |
| sp|O42922|YBIH_SCHPO | Uncharacterized MFS-type transporter C16A3.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.17c PE=3 SV=1 | 31 | 548 | 1.0E-33 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 31 | 504 | 1.0E-33 |
| sp|P96712|BMR3_BACSU | Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168) GN=bmr3 PE=1 SV=1 | 46 | 533 | 4.0E-32 |
| sp|P9WG85|Y1877_MYCTU | Uncharacterized MFS-type transporter Rv1877 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1877 PE=3 SV=1 | 45 | 572 | 4.0E-30 |
| sp|P9WG84|Y1877_MYCTO | Uncharacterized MFS-type transporter MT1926 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1926 PE=3 SV=1 | 45 | 572 | 4.0E-30 |
| sp|P36172|VBA5_YEAST | Vacuolar basic amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA5 PE=3 SV=1 | 37 | 547 | 6.0E-25 |
| sp|Q00357|TOXA_COCCA | Putative HC-toxin efflux carrier TOXA OS=Cochliobolus carbonum GN=TOXA PE=3 SV=1 | 4 | 361 | 7.0E-22 |
| sp|O31563|YFIU_BACSU | Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis (strain 168) GN=yfiU PE=3 SV=1 | 45 | 521 | 8.0E-19 |
| sp|O35018|LMRB_BACSU | Lincomycin resistance protein LmrB OS=Bacillus subtilis (strain 168) GN=lmrB PE=3 SV=1 | 36 | 361 | 1.0E-15 |
| sp|P94422|YCNB_BACSU | Uncharacterized MFS-type transporter YcnB OS=Bacillus subtilis (strain 168) GN=ycnB PE=3 SV=1 | 32 | 455 | 3.0E-15 |
| sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 45 | 452 | 3.0E-15 |
| sp|P33335|SGE1_YEAST | Protein SGE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGE1 PE=1 SV=1 | 52 | 207 | 5.0E-14 |
| sp|Q9CCP7|MFS55_MYCLE | MFS-type drug efflux transporter P55 OS=Mycobacterium leprae (strain TN) GN=ML0556 PE=3 SV=1 | 32 | 361 | 1.0E-13 |
| sp|P94574|YWOD_BACSU | Uncharacterized MFS-type transporter YwoD OS=Bacillus subtilis (strain 168) GN=ywoD PE=3 SV=1 | 28 | 459 | 1.0E-13 |
| sp|P25594|VBA3_YEAST | Vacuolar basic amino acid transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA3 PE=1 SV=1 | 122 | 547 | 2.0E-13 |
| sp|P50080|AZR1_YEAST | Azole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AZR1 PE=1 SV=1 | 53 | 197 | 6.0E-13 |
| sp|P23054|TCRB_BACSU | Tetracycline resistance protein OS=Bacillus subtilis (strain 168) GN=tetB PE=3 SV=1 | 40 | 367 | 7.0E-13 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 45 | 468 | 2.0E-12 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 45 | 468 | 2.0E-12 |
| sp|Q8Y9K8|LMRB_LISMO | Lincomycin resistance protein LmrB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmrB PE=3 SV=1 | 36 | 365 | 8.0E-12 |
| sp|Q92EE1|LMRB_LISIN | Lincomycin resistance protein LmrB OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lmrB PE=3 SV=1 | 36 | 365 | 9.0E-12 |
| sp|P9WJY3|MFS55_MYCTU | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1410c PE=1 SV=1 | 32 | 361 | 3.0E-11 |
| sp|P9WJY2|MFS55_MYCTO | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1454 PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|C6DTH3|MFS55_MYCTK | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain KZN 1435 / MDR) GN=TBMG_02570 PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|A5WM93|MFS55_MYCTF | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain F11) GN=TBFG_11439 PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|A5U2B2|MFS55_MYCTA | MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_1419 PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|C1AN55|MFS55_MYCBT | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_1446 PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|A1KIJ9|MFS55_MYCBP | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_1471c PE=1 SV=1 | 32 | 361 | 3.0E-11 |
| sp|Q7U042|MFS55_MYCBO | MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1445c PE=3 SV=1 | 32 | 361 | 3.0E-11 |
| sp|P31474|HSRA_ECOLI | Probable transport protein HsrA OS=Escherichia coli (strain K12) GN=hsrA PE=1 SV=1 | 41 | 450 | 5.0E-11 |
| sp|Q92341|STR3_SCHPO | Siderophore iron transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=str3 PE=1 SV=1 | 26 | 550 | 5.0E-11 |
| sp|P32369|BAIG_CLOSV | Bile acid transporter OS=Clostridium scindens (strain JCM 10418 / VPI 12708) GN=baiG PE=3 SV=2 | 42 | 258 | 6.0E-11 |
| sp|P76269|YEBQ_ECOLI | Uncharacterized transporter YebQ OS=Escherichia coli (strain K12) GN=yebQ PE=3 SV=2 | 36 | 359 | 9.0E-11 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 29 | 365 | 1.0E-10 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 29 | 458 | 1.0E-10 |
| sp|P0A4K6|TCR_STREE | Tetracycline resistance protein OS=Streptococcus pneumoniae GN=tet PE=3 SV=1 | 40 | 367 | 2.0E-10 |
| sp|P0A4K8|TCR_BACIU | Tetracycline resistance protein OS=Bacillus subtilis GN=tet PE=3 SV=1 | 40 | 367 | 2.0E-10 |
| sp|P0A4K7|TCR_BACCE | Tetracycline resistance protein OS=Bacillus cereus GN=tet PE=3 SV=1 | 40 | 367 | 2.0E-10 |
| sp|Q99S97|SDRM_STAAN | Multidrug efflux pump SdrM OS=Staphylococcus aureus (strain N315) GN=sdrM PE=1 SV=1 | 42 | 347 | 2.0E-10 |
| sp|P07561|TCR_GEOSE | Tetracycline resistance protein OS=Geobacillus stearothermophilus GN=tet PE=3 SV=1 | 40 | 367 | 2.0E-10 |
| sp|P9WJY4|EFPA_MYCTO | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=efpA PE=3 SV=1 | 45 | 375 | 5.0E-10 |
| sp|P9WJY5|EFPA_MYCTU | Uncharacterized MFS-type transporter EfpA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=efpA PE=1 SV=1 | 45 | 375 | 5.0E-10 |
| sp|P0AEJ0|EMRB_ECOLI | Multidrug export protein EmrB OS=Escherichia coli (strain K12) GN=emrB PE=1 SV=1 | 42 | 296 | 7.0E-10 |
| sp|P0AEJ1|EMRB_ECO57 | Multidrug export protein EmrB OS=Escherichia coli O157:H7 GN=emrB PE=3 SV=1 | 42 | 296 | 7.0E-10 |
| sp|P9WG90|STP_MYCTO | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=stp PE=3 SV=1 | 42 | 360 | 2.0E-09 |
| sp|P9WG91|STP_MYCTU | Multidrug resistance protein Stp OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=stp PE=1 SV=1 | 42 | 360 | 4.0E-09 |
| sp|P13924|TCR_STRAG | Tetracycline resistance protein OS=Streptococcus agalactiae GN=tet PE=3 SV=1 | 40 | 367 | 5.0E-09 |
| sp|P36890|TCR_STAHY | Tetracycline resistance protein OS=Staphylococcus hyicus GN=tet PE=3 SV=1 | 40 | 189 | 5.0E-09 |
| sp|P52600|EMRY_ECOLI | Probable multidrug resistance protein EmrY OS=Escherichia coli (strain K12) GN=emrY PE=2 SV=1 | 42 | 319 | 6.0E-09 |
| sp|P44927|EMRB_HAEIN | Multidrug export protein EmrB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=emrB PE=3 SV=1 | 45 | 197 | 3.0E-08 |
| sp|P9WJW9|Y2459_MYCTU | Uncharacterized MFS-type transporter Rv2459 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2459 PE=3 SV=1 | 42 | 471 | 3.0E-08 |
| sp|P9WJW8|Y2459_MYCTO | Uncharacterized MFS-type transporter MT2534 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2534 PE=3 SV=1 | 42 | 471 | 3.0E-08 |
| sp|O94607|STR2_SCHPO | Siderophore iron transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=str2 PE=1 SV=1 | 39 | 536 | 4.0E-08 |
| sp|B5XPB7|MDTD_KLEP3 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae (strain 342) GN=mdtD PE=3 SV=1 | 45 | 210 | 6.0E-08 |
| sp|Q6D2A9|MDTD_PECAS | Putative multidrug resistance protein MdtD OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=mdtD PE=3 SV=1 | 45 | 281 | 6.0E-08 |
| sp|P46104|LMRA_STRLN | Lincomycin resistance protein OS=Streptomyces lincolnensis GN=lmrA PE=3 SV=1 | 45 | 196 | 7.0E-08 |
| sp|A6TBH6|MDTD_KLEP7 | Putative multidrug resistance protein MdtD OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdtD PE=3 SV=1 | 45 | 205 | 8.0E-08 |
| sp|B4T9U3|MDTD_SALHS | Putative multidrug resistance protein MdtD OS=Salmonella heidelberg (strain SL476) GN=mdtD PE=3 SV=1 | 40 | 205 | 9.0E-08 |
| sp|B4TNI8|MDTD_SALSV | Putative multidrug resistance protein MdtD OS=Salmonella schwarzengrund (strain CVM19633) GN=mdtD PE=3 SV=1 | 45 | 197 | 1.0E-07 |
| sp|Q8Z5F5|MDTD_SALTI | Putative multidrug resistance protein MdtD OS=Salmonella typhi GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|B5EXV9|MDTD_SALA4 | Putative multidrug resistance protein MdtD OS=Salmonella agona (strain SL483) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|B5R0C2|MDTD_SALEP | Putative multidrug resistance protein MdtD OS=Salmonella enteritidis PT4 (strain P125109) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|B4SXW2|MDTD_SALNS | Putative multidrug resistance protein MdtD OS=Salmonella newport (strain SL254) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|B5BF67|MDTD_SALPK | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain AKU_12601) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|P42670|PUR8_STRAD | Puromycin resistance protein pur8 OS=Streptomyces alboniger GN=pur8 PE=3 SV=1 | 43 | 365 | 1.0E-07 |
| sp|Q8ZNQ0|MDTD_SALTY | Putative multidrug resistance protein MdtD OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|B5FMU8|MDTD_SALDC | Putative multidrug resistance protein MdtD OS=Salmonella dublin (strain CT_02021853) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|A9N7L0|MDTD_SALPB | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=mdtD PE=3 SV=1 | 40 | 205 | 1.0E-07 |
| sp|Q5PDW9|MDTD_SALPA | Putative multidrug resistance protein MdtD OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=mdtD PE=3 SV=1 | 45 | 205 | 1.0E-07 |
| sp|P62967|TCR_STAES | Tetracycline resistance protein OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tet PE=3 SV=1 | 41 | 360 | 2.0E-07 |
| sp|P02983|TCR_STAAU | Tetracycline resistance protein OS=Staphylococcus aureus GN=tet PE=3 SV=3 | 41 | 360 | 2.0E-07 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 47 | 279 | 2.0E-07 |
| sp|Q7CJL1|MDTD_YERPE | Putative multidrug resistance protein MdtD OS=Yersinia pestis GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|A7FG15|MDTD_YERP3 | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|Q1C5L8|MDTD_YERPA | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|B2K9M2|MDTD_YERPB | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|A9QZU7|MDTD_YERPG | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|Q1CK62|MDTD_YERPN | Putative multidrug resistance protein MdtD OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|A4TMR4|MDTD_YERPP | Putative multidrug resistance protein MdtD OS=Yersinia pestis (strain Pestoides F) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|B1JSD2|MDTD_YERPY | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=mdtD PE=3 SV=1 | 45 | 205 | 3.0E-07 |
| sp|A8AEE4|MDTD_CITK8 | Putative multidrug resistance protein MdtD OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdtD PE=3 SV=1 | 45 | 197 | 4.0E-07 |
| sp|P44903|HSRA_HAEIN | Probable transport protein HsrA OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hsrA PE=3 SV=1 | 42 | 450 | 1.0E-06 |
| sp|C6DBD0|MDTD_PECCP | Putative multidrug resistance protein MdtD OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=mdtD PE=3 SV=1 | 45 | 207 | 1.0E-06 |
| sp|O74829|YN2F_SCHPO | Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 | 43 | 189 | 2.0E-06 |
| sp|Q668C4|MDTD_YERPS | Putative multidrug resistance protein MdtD OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=mdtD PE=3 SV=1 | 45 | 205 | 2.0E-06 |
| sp|A4WCC3|MDTD_ENT38 | Putative multidrug resistance protein MdtD OS=Enterobacter sp. (strain 638) GN=mdtD PE=3 SV=1 | 45 | 207 | 2.0E-06 |
| sp|Q00538|MMR_BACSU | Methylenomycin A resistance protein OS=Bacillus subtilis (strain 168) GN=mmr PE=3 SV=1 | 31 | 351 | 5.0E-06 |
| sp|Q870L2|MIRB_EMENI | Siderophore iron transporter mirB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mirB PE=3 SV=1 | 34 | 451 | 6.0E-06 |
| sp|A1JKW8|MDTD_YERE8 | Putative multidrug resistance protein MdtD OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=mdtD PE=3 SV=2 | 35 | 276 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008150 | biological_process | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| 2 | 71 | 93 | 22 |
| 3 | 105 | 122 | 17 |
| 4 | 126 | 148 | 22 |
| 5 | 161 | 180 | 19 |
| 6 | 190 | 212 | 22 |
| 7 | 229 | 246 | 17 |
| 8 | 261 | 283 | 22 |
| 9 | 296 | 318 | 22 |
| 10 | 333 | 355 | 22 |
| 11 | 362 | 384 | 22 |
| 12 | 394 | 416 | 22 |
| 13 | 498 | 520 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >AgabiH97|064840 MSMPSAERQPLLPGSSDSKKCPLGPRDISFSNRVGILSGVWLASFLSAFNQTLVPTMLASISSEFKKSNQASWLG TAYLLATCTFTPLYGRLCNVLGRKGANQTALFFAAAGCVMCGLSNSMEMLILARFLAGMGGGGVFTTSSIIVSDM YSIRSRGLAQGVASVFNGLGLGLGGPFGGLITDWLGWRWAFLIQMPLFVLSYLLTQYNLCYVTEGKGKSTKEILK RIDYGGSATLMLFVGSVLFFLSERYNKNLPWDSPTVVGSLVAALISVVAFFVIELHIAPEPIMAPFLLKQRIPLL VSASNFLVANCNFAVMYFFPLWFQTVMLTKASMAGAHLFPNSFAMSTGSLFAGWMMHKTGKYKLLNLIFGAFPFF GVIGICFINEDSGFIQSWFSIMPLGFGNAVVLQTMLIALLVHLPENCVAIGTGFNTLFRGVGQVGGVAISSAIFQ SKLAHELNARITGPGAEELITRLQHEANLIISLPPDTQRAARDAYDASLKAVFIYAACSTFLAFIVRLPIPDKEL DSRPKVAEPTQAPIPEESDESERDESPSRASETDVTVVEEDGLGEEDDFKKRVERVLTRKRPRRLSGFESQDFAI DPETLPTTSNTARVSQN* |
| Coding | >AgabiH97|064840 ATGTCGATGCCCAGTGCTGAACGCCAGCCTCTTCTTCCAGGATCTTCTGATTCCAAGAAATGTCCTCTTGGACCC CGTGATATATCGTTCTCGAATCGCGTTGGGATACTATCTGGTGTTTGGCTGGCTTCGTTCTTGTCCGCTTTTAAC CAAACACTAGTACCAACGATGCTAGCATCAATATCTTCGGAGTTCAAGAAATCTAATCAAGCCAGTTGGCTGGGT ACTGCGTATCTCCTTGCGACATGTACATTTACCCCACTGTATGGACGTTTATGCAATGTCCTAGGGCGTAAAGGT GCTAATCAAACAGCACTCTTCTTTGCGGCTGCGGGATGTGTGATGTGCGGACTTTCTAATTCAATGGAAATGTTA ATCCTGGCTCGCTTTCTTGCAGGAATGGGAGGTGGAGGAGTGTTCACTACGTCTTCGATCATTGTTAGCGACATG TATAGCATACGGAGTCGAGGTCTAGCTCAAGGAGTCGCTAGTGTGTTCAATGGTCTCGGCTTAGGTCTCGGAGGT CCTTTCGGGGGACTAATAACCGACTGGCTGGGATGGAGATGGGCGTTTCTGATTCAAATGCCGCTCTTTGTACTT TCATACCTCCTGACGCAGTATAATTTGTGTTACGTCACAGAGGGCAAAGGGAAGAGTACGAAAGAGATCTTGAAA CGGATTGATTATGGTGGTAGTGCTACGTTGATGCTTTTCGTCGGATCTGTTCTTTTTTTCCTCAGTGAACGTTAC AACAAAAATTTACCTTGGGATAGTCCGACTGTGGTTGGTTCCCTCGTCGCTGCCCTCATCTCAGTGGTCGCATTT TTTGTTATAGAGCTACATATCGCCCCCGAGCCAATTATGGCACCATTCCTTTTGAAACAAAGGATTCCTCTTCTC GTCAGCGCATCAAATTTCCTTGTTGCAAACTGCAATTTTGCAGTCATGTATTTCTTCCCTCTGTGGTTCCAGACT GTAATGCTCACGAAGGCATCAATGGCTGGGGCTCATTTGTTTCCCAACAGCTTTGCCATGTCTACTGGTTCGTTG TTTGCTGGCTGGATGATGCACAAAACCGGAAAATACAAGCTATTGAACTTGATATTCGGAGCCTTTCCCTTCTTT GGGGTTATTGGTATTTGTTTCATTAACGAGGACTCTGGATTCATTCAGTCATGGTTCAGCATTATGCCTCTAGGA TTTGGCAATGCTGTTGTACTCCAAACTATGCTCATTGCACTACTGGTTCATCTTCCAGAAAATTGCGTAGCAATA GGAACCGGGTTTAATACTCTATTCCGAGGAGTTGGCCAAGTTGGAGGAGTGGCTATATCTTCAGCTATCTTCCAA TCCAAACTCGCACATGAGCTTAATGCACGAATAACAGGTCCGGGTGCCGAGGAACTCATTACGAGATTACAACAC GAAGCAAATCTCATAATTTCCCTTCCGCCTGACACTCAACGTGCCGCTAGAGACGCTTATGATGCCAGTTTAAAG GCTGTATTTATCTATGCCGCTTGCTCGACGTTTTTAGCCTTCATTGTCCGTCTTCCTATACCCGACAAAGAACTT GATTCCCGCCCGAAAGTCGCTGAACCTACACAAGCCCCGATCCCAGAAGAAAGCGACGAGTCAGAACGGGATGAG AGTCCTTCTCGCGCATCAGAAACTGATGTTACCGTGGTGGAAGAAGATGGGCTGGGGGAGGAGGATGATTTCAAA AAACGGGTAGAGAGAGTCTTAACCCGTAAACGGCCGAGACGATTATCTGGTTTCGAGTCGCAAGATTTTGCGATT GATCCAGAGACTTTGCCAACAACTTCGAACACCGCGCGGGTTTCACAAAATTAG |
| Transcript | >AgabiH97|064840 ATGTCGATGCCCAGTGCTGAACGCCAGCCTCTTCTTCCAGGATCTTCTGATTCCAAGAAATGTCCTCTTGGACCC CGTGATATATCGTTCTCGAATCGCGTTGGGATACTATCTGGTGTTTGGCTGGCTTCGTTCTTGTCCGCTTTTAAC CAAACACTAGTACCAACGATGCTAGCATCAATATCTTCGGAGTTCAAGAAATCTAATCAAGCCAGTTGGCTGGGT ACTGCGTATCTCCTTGCGACATGTACATTTACCCCACTGTATGGACGTTTATGCAATGTCCTAGGGCGTAAAGGT GCTAATCAAACAGCACTCTTCTTTGCGGCTGCGGGATGTGTGATGTGCGGACTTTCTAATTCAATGGAAATGTTA ATCCTGGCTCGCTTTCTTGCAGGAATGGGAGGTGGAGGAGTGTTCACTACGTCTTCGATCATTGTTAGCGACATG TATAGCATACGGAGTCGAGGTCTAGCTCAAGGAGTCGCTAGTGTGTTCAATGGTCTCGGCTTAGGTCTCGGAGGT CCTTTCGGGGGACTAATAACCGACTGGCTGGGATGGAGATGGGCGTTTCTGATTCAAATGCCGCTCTTTGTACTT TCATACCTCCTGACGCAGTATAATTTGTGTTACGTCACAGAGGGCAAAGGGAAGAGTACGAAAGAGATCTTGAAA CGGATTGATTATGGTGGTAGTGCTACGTTGATGCTTTTCGTCGGATCTGTTCTTTTTTTCCTCAGTGAACGTTAC AACAAAAATTTACCTTGGGATAGTCCGACTGTGGTTGGTTCCCTCGTCGCTGCCCTCATCTCAGTGGTCGCATTT TTTGTTATAGAGCTACATATCGCCCCCGAGCCAATTATGGCACCATTCCTTTTGAAACAAAGGATTCCTCTTCTC GTCAGCGCATCAAATTTCCTTGTTGCAAACTGCAATTTTGCAGTCATGTATTTCTTCCCTCTGTGGTTCCAGACT GTAATGCTCACGAAGGCATCAATGGCTGGGGCTCATTTGTTTCCCAACAGCTTTGCCATGTCTACTGGTTCGTTG TTTGCTGGCTGGATGATGCACAAAACCGGAAAATACAAGCTATTGAACTTGATATTCGGAGCCTTTCCCTTCTTT GGGGTTATTGGTATTTGTTTCATTAACGAGGACTCTGGATTCATTCAGTCATGGTTCAGCATTATGCCTCTAGGA TTTGGCAATGCTGTTGTACTCCAAACTATGCTCATTGCACTACTGGTTCATCTTCCAGAAAATTGCGTAGCAATA GGAACCGGGTTTAATACTCTATTCCGAGGAGTTGGCCAAGTTGGAGGAGTGGCTATATCTTCAGCTATCTTCCAA TCCAAACTCGCACATGAGCTTAATGCACGAATAACAGGTCCGGGTGCCGAGGAACTCATTACGAGATTACAACAC GAAGCAAATCTCATAATTTCCCTTCCGCCTGACACTCAACGTGCCGCTAGAGACGCTTATGATGCCAGTTTAAAG GCTGTATTTATCTATGCCGCTTGCTCGACGTTTTTAGCCTTCATTGTCCGTCTTCCTATACCCGACAAAGAACTT GATTCCCGCCCGAAAGTCGCTGAACCTACACAAGCCCCGATCCCAGAAGAAAGCGACGAGTCAGAACGGGATGAG AGTCCTTCTCGCGCATCAGAAACTGATGTTACCGTGGTGGAAGAAGATGGGCTGGGGGAGGAGGATGATTTCAAA AAACGGGTAGAGAGAGTCTTAACCCGTAAACGGCCGAGACGATTATCTGGTTTCGAGTCGCAAGATTTTGCGATT GATCCAGAGACTTTGCCAACAACTTCGAACACCGCGCGGGTTTCACAAAATTAG |
| Gene | >AgabiH97|064840 ATGTCGATGCCCAGTGCTGAACGCCAGCCTCTTCTTCCAGGATCTTCTGATTCCAAGAAATGTCCTCTTGGACCC CGTGATATATCGTTCTCGAATCGCGTTGGGATACTATCTGGTGTTTGGCTGGCTTCGTTCTTGTCCGTAAGTTGT CATATATCGTCGAGCTTTACGACCGGCTTATATTTTGCTATCTAGGCTTTTAACCGTGAGTGCGGCCCTCGCTTT CCTTTCTTCTCGACGCTCATGTACCCCTAGAAACACTAGTACCAACGAGTATGCTTTTTGAAAAAATGTGAAATT TTTCAATCTAATAAACCTTATCTCAGTGCTAGCATCAATATCTTCGGAGTTCAAGAAATCTAATCAAGCCAGTTG GCTGGGTACTGCGTAAGCGATGTCAGAACCAGCTCATACGATATGTGGCAAATGCTGATTCTCGTTCATAAGGTA TCTCCTTGCGACATGTACATTTACCCCACTGTATGGACGTTTATGCAATGTCCTAGGGCGTAAAGGTGCTAATCA AACAGCACTCTTCTTTGCGGCTGCGGGATGTGTGATGTGCGGACTTTCTAATTCAATGGAAATGTTAATCCTGGC TCGCTTTGTACGTTTGATGTCTTTGTTGTTTCTTTTCAAATGGAGATCTTACGGATCCTCCCTCAGCTTGCAGGA ATGGGAGGTGGAGGAGTGTTCACTACGTCTTCGTAAGTTGTACTCTGACTTTTAGTTATCAACGCTGACGATCAA CCTTGATTAGGATCATTGTTAGCGACATGTATAGCATACGGGTAGGTCGATGCTCGATTGACCGGATAATCAACT AACGGTGCGGCAGAGTCGAGGTCTAGCTCAAGGAGTCGCTAGTGTGTTCAATGGTGTACGTGCACACGTCCTAAC GAGGTAGAAGAAGCTTACTCTTTCTATTCAGCTCGGCTTAGGTCTCGGAGGTCCTTTCGGGGGACTAATAACCGA CTGGTAAGTATTTACATGCATCTTGCTGAAATTGAAGCCAACACTAAGTGGTTCACAGGCTGGGATGGAGATGGG CGTTTCTGATTCAAATGCCGCTCTTTGTACTTTCATACCTCCTGACGCAGTATAATTTGTGTTACGTCACAGAGG TAAATAAGTGTTCCTCGTCGTTGTAAATTATGGTACTCATCCCTCTTTACAGGGCAAAGGGAAGAGTACGAAAGA GATCTTGAAACGGATTGATTATGGTGGTAGTGCTACGTTGATGCTTTTCGTGCGTTCAATGTTTTCATATCCATT TTGTCATCGACTTACCCTTGCCTTCGTTATAGGTCGGATCTGTTCTTTTTTTCCTCAGTGAACGTTACAACAAAA ATTTACCTGTAGGCTTTATCAAAGTTCTCCTCACCTATTTTTGGCTGACCGATATGTGAAATAGTGGGATAGTCC GACTGTGGTTGGTTCCCTCGTCGCTGCCCTCATCTCAGTGGTCGCATTTTTTGTTATAGAGCTACATATCGCCCC CGAGCCAATTATGGCACCATTCCTTTTGAAACAAAGGATTCCTCTTCTCGTCAGCGCATCAAATTTCCTTGTTGC AAACTGCAATTTTGCAGTCATGTATTTCTTCCCTCTGTGGTTCCAGACTGTAATGCTCACGAAGGCATCAATGGC TGGTAAGCGGTTTTGTTTCTCGTGCATCGTTACCTTGAAATGATTCATTTTCATTAGGGGCTCATTTGTTTCCCA ACAGCTTTGCCATGTCTACTGGTTCGTTGTTTGCTGGCTGGATGATGCACAAAACCGGAAAATACAAGCTATTGA ACTTGATATTCGGAGCCTTTCCCTTCTTTGGGGTTATTGGTATTTGTTTCATTAACGAGGACTCTGGATTCATTC AGTCATGGTTCAGCATTGTGCGTGCGCACATTAATGGAGGCTATGTTCTTTGTGTTGACTCCGCCTGTCGTATAT AGATGCCTCTAGGATTTGGCAATGCTGTTGTACTCCAAACTATGCTCAGTGAGTTCATGTATCCTTCCGCGATCC ACTCATCCATCTGATATGGTTTGTTAGTTGCACTACTGGTTCATCTTCCAGGTATGCGACGTCTCAGGAAAGAAG GCCCTCGTTTCTGACCCTCAAATCGTAGAAAATTGCGTAGCAATAGGAACCGGGTTTAATACTCTATTCCGAGGA GTTGGTACGTTCCCCTTCGATTCTGTTCCTTTCCTTTGCTGATATCGTCGTTACATAGGCCAAGTTGGAGGAGTG GCTATATCTTCAGCTATCTTCCAATCCAAACTCGCACATGAGCTTAATGCACGAATAACAGGTCCGGGTGCCGAG GAAGTAAGCGTATACAATCTACCTTCGCGAATTATCTCTGATGCATTGTCCAGCTCATTACGAGATTACAACACG AAGCAAATCTCATAATTTCCCTTCCGCCTGACACTCAACGTGCCGCTAGAGACGCTTATGATGCCAGTTTAAAGG CTGTATTTATCTATGCCGCTTGCTCGACGTTTTTAGCCTTCATTGTCCGTCTTCCTGTGAGTACGATCAGTTTTC GTGCTCTTCCATTTTTCCGAGCTTTCTATGCCAGATACCCGACAAAGAACTTGATTCCCGCCCGAAAGTCGCTGA ACCTACACAAGCCCCGATCCCAGAAGAAAGCGACGAGTCAGAACGGGATGAGAGTCCTTCTCGCGCATCAGAAAC TGATGTTACCGTGGTGGAAGAAGATGGGCTGGGGGAGGAGGATGATTTCAAAAAACGGGTAGAGAGAGTCTTAAC CCGTAAACGGCCGAGACGATTATCTGGTTTCGAGTCGCAAGATTTTGCGATTGATCCAGAGACTTTGCCAACAAC TTCGAACACCGCGCGGGTTTCACAAAATTAG |