Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|063400
Gene name
Locationscaffold_3:2579497..2581235
Strand+
Gene length (bp)1738
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00481 PP2C Protein phosphatase 2C 1.2E-21 180 343

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q3UV70|PDP1_MOUSE [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 83 479 9.0E-23
sp|Q9P0J1|PDP1_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 83 479 1.0E-22
sp|Q5RA52|PDP1_PONAB [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 83 479 2.0E-22
sp|O88483|PDP1_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 83 479 2.0E-22
sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 83 479 3.0E-22
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q3UV70|PDP1_MOUSE [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 83 479 9.0E-23
sp|Q9P0J1|PDP1_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 83 479 1.0E-22
sp|Q5RA52|PDP1_PONAB [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 83 479 2.0E-22
sp|O88483|PDP1_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 83 479 2.0E-22
sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 83 479 3.0E-22
sp|Q9P2J9|PDP2_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 98 479 8.0E-21
sp|O14189|PP2C5_SCHPO Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 44 479 4.0E-20
sp|O88484|PDP2_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 73 479 3.0E-19
sp|Q12511|PDP1_YEAST [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 100 416 8.0E-18
sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 185 341 8.0E-08
sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 247 341 7.0E-07
sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 48 339 3.0E-06
sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 229 380 8.0E-06
[Show less]

GO

GO Term Description Terminal node
GO:0004722 protein serine/threonine phosphatase activity Yes
GO:0140096 catalytic activity, acting on a protein No
GO:0003674 molecular_function No
GO:0016791 phosphatase activity No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004721 phosphoprotein phosphatase activity No
GO:0042578 phosphoric ester hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|063400
MIVGRPVPPASATWAYPDDIPGSRCGPEDGPWPRQYRVLSENEVWRELKELAKPHSVVFNNDRGFRADSINFQPS
PKTKTQDRHVVTEINIRGQKWNLTGVFDGHLGDVTVEHVSYHLPIIVEEFLQGALEQNPERELTPEYIGDLFSQS
ILAFDDAIAHDVLDLFGGSVEELEKYSDSEIKEIINDQHLGGANWRKARLCMYGTTALVALVDPEHVNLWVANLG
DCQPVLITPDDEGIKDWQIEVLTTTHNGDNDDELDRIRAEHPGEDECILNRRVLGALAPTRCLGDIPFKQPPAFT
RRVLYNLFPGFHNTSPWEEFLNRNRTPPYITAKPDVVHRKLRRASSDSLPPPQITFSPPSTDSLTKFSYKPGDEP
ESHIVHRPTFLVLTSDGFSDLCSGEGQTRVLESWARGMMELWSLGEVGEGGKGGSGRKEDVRGSGNMALRLLRRT
IGDDRFAVSKVLTLDMDEAWIDDTAVVVVTV*
Coding >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTCATTTGGGCGATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTT
CTTCAAGGAGCACTTGAGCAGAACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCG
ATACTCGCATTCGACGACGCAATTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAG
TATTCGGACTCTGAAATCAAGGAGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTG
TGTATGTATGGTACAACAGCACTTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGC
GACTGCCAACCAGTGTTGATTACCCCGGATGACGAAGGCATCAAAGACTGGCAGATTGAAGTTCTGACAACGACA
CACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAGCACCCTGGCGAAGACGAATGTATTTTGAAT
CGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACA
AGAAGGGTGTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGA
ACTCCACCTTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCA
CCTCCACAAATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCA
GAGAGTCATATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAA
GGTCAGACCAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGT
GGGAAGGGTGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACT
ATTGGGGATGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCG
GTGGTGGTTGTGACTGTTTGA
Transcript >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTCATTTGGGCGATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTT
CTTCAAGGAGCACTTGAGCAGAACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCG
ATACTCGCATTCGACGACGCAATTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAG
TATTCGGACTCTGAAATCAAGGAGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTG
TGTATGTATGGTACAACAGCACTTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGC
GACTGCCAACCAGTGTTGATTACCCCGGATGACGAAGGCATCAAAGACTGGCAGATTGAAGTTCTGACAACGACA
CACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAGCACCCTGGCGAAGACGAATGTATTTTGAAT
CGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACA
AGAAGGGTGTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGA
ACTCCACCTTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCA
CCTCCACAAATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCA
GAGAGTCATATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAA
GGTCAGACCAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGT
GGGAAGGGTGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACT
ATTGGGGATGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCG
GTGGTGGTTGTGACTGTTTGA
Gene >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTATGGTTTGTCCATCCCTCTATCTCGTTGCGCTAACATGTTTTTCGAACCAGGTCATTTGGGCG
ATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTTCTTCAAGGAGCACTTGAGCAGA
ACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCGATACTCGCATTCGACGACGCAA
TTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAGTATTCGGACTCTGAAATCAAGG
AGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTGTGTATGTATGGTACAACAGCAC
TTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGCGACTGCCAACCAGGTAATGTTG
GTCCGGCCGATGATGACGTATATTACTCATCCTCTCGGCTCAGTGTTGATTACCCCGGATGACGAAGGCATCAAA
GACTGGCAGATTGAAGTTCTGACAACGACACACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAG
CACCCTGGCGAAGACGAATGTATTTTGAATCGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGTGAGTACCCG
TCTGTTACATCATTCCATCAAACCCCGCATGCTTCTTTTAGCCTAAAATAAACTCATCCCGCCGCTTATTGAGTT
TTGGGCGAGCAATTGACTTGGGGTCGTTTCTACCTGTCCCTCGGGTCTAGCTGTTCCTGGCCTGTTCTCCCGAAT
TTGTCGGCTGACTTTACTCTAAACAGGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACAAGAAGGGT
GTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGAACTCCACC
TTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCACCTCCACA
AATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCAGAGAGTCA
TATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAAGGTCAGAC
CAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGTGGGAAGGG
TGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACTATTGGGGA
TGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCGGTGGTGGT
TGTGACTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail