Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabiH97|063400
Gene name
Locationscaffold_3:2579497..2581235
Strand+
Gene length (bp)1738
Transcript length (bp)1446
Coding sequence length (bp)1446
Protein length (aa) 482

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00481 PP2C Protein phosphatase 2C 1.2E-21 180 343

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q3UV70|PDP1_MOUSE [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 83 479 9.0E-23
sp|Q9P0J1|PDP1_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 83 479 1.0E-22
sp|Q5RA52|PDP1_PONAB [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 83 479 2.0E-22
sp|O88483|PDP1_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 83 479 2.0E-22
sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 83 479 3.0E-22
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q3UV70|PDP1_MOUSE [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 83 479 9.0E-23
sp|Q9P0J1|PDP1_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 83 479 1.0E-22
sp|Q5RA52|PDP1_PONAB [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 83 479 2.0E-22
sp|O88483|PDP1_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 83 479 2.0E-22
sp|P35816|PDP1_BOVIN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 83 479 3.0E-22
sp|Q9P2J9|PDP2_HUMAN [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 98 479 8.0E-21
sp|O14189|PP2C5_SCHPO Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 44 479 4.0E-20
sp|O88484|PDP2_RAT [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 73 479 3.0E-19
sp|Q12511|PDP1_YEAST [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 100 416 8.0E-18
sp|Q6ZGY0|P2C26_ORYSJ Probable protein phosphatase 2C 26 OS=Oryza sativa subsp. japonica GN=Os02g0690500 PE=2 SV=1 185 341 8.0E-08
sp|O82302|P2C29_ARATH Protein phosphatase 2C 29 OS=Arabidopsis thaliana GN=PLL1 PE=1 SV=2 247 341 7.0E-07
sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40 OS=Arabidopsis thaliana GN=At3g16560 PE=2 SV=1 48 339 3.0E-06
sp|Q8RWN7|P2C32_ARATH Protein phosphatase 2C 32 OS=Arabidopsis thaliana GN=POL PE=1 SV=2 229 380 8.0E-06
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GO

GO Term Description Terminal node
GO:0004722 protein serine/threonine phosphatase activity Yes
GO:0140096 catalytic activity, acting on a protein No
GO:0003674 molecular_function No
GO:0016791 phosphatase activity No
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004721 phosphoprotein phosphatase activity No
GO:0042578 phosphoric ester hydrolase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Developmental stages of Agaricus bisporus (strain A15). Published in Pelkmans et al, Applied Microbiology and Biotechnology, 2016

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >AgabiH97|063400
MIVGRPVPPASATWAYPDDIPGSRCGPEDGPWPRQYRVLSENEVWRELKELAKPHSVVFNNDRGFRADSINFQPS
PKTKTQDRHVVTEINIRGQKWNLTGVFDGHLGDVTVEHVSYHLPIIVEEFLQGALEQNPERELTPEYIGDLFSQS
ILAFDDAIAHDVLDLFGGSVEELEKYSDSEIKEIINDQHLGGANWRKARLCMYGTTALVALVDPEHVNLWVANLG
DCQPVLITPDDEGIKDWQIEVLTTTHNGDNDDELDRIRAEHPGEDECILNRRVLGALAPTRCLGDIPFKQPPAFT
RRVLYNLFPGFHNTSPWEEFLNRNRTPPYITAKPDVVHRKLRRASSDSLPPPQITFSPPSTDSLTKFSYKPGDEP
ESHIVHRPTFLVLTSDGFSDLCSGEGQTRVLESWARGMMELWSLGEVGEGGKGGSGRKEDVRGSGNMALRLLRRT
IGDDRFAVSKVLTLDMDEAWIDDTAVVVVTV*
Coding >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTCATTTGGGCGATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTT
CTTCAAGGAGCACTTGAGCAGAACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCG
ATACTCGCATTCGACGACGCAATTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAG
TATTCGGACTCTGAAATCAAGGAGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTG
TGTATGTATGGTACAACAGCACTTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGC
GACTGCCAACCAGTGTTGATTACCCCGGATGACGAAGGCATCAAAGACTGGCAGATTGAAGTTCTGACAACGACA
CACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAGCACCCTGGCGAAGACGAATGTATTTTGAAT
CGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACA
AGAAGGGTGTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGA
ACTCCACCTTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCA
CCTCCACAAATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCA
GAGAGTCATATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAA
GGTCAGACCAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGT
GGGAAGGGTGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACT
ATTGGGGATGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCG
GTGGTGGTTGTGACTGTTTGA
Transcript >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTCATTTGGGCGATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTT
CTTCAAGGAGCACTTGAGCAGAACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCG
ATACTCGCATTCGACGACGCAATTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAG
TATTCGGACTCTGAAATCAAGGAGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTG
TGTATGTATGGTACAACAGCACTTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGC
GACTGCCAACCAGTGTTGATTACCCCGGATGACGAAGGCATCAAAGACTGGCAGATTGAAGTTCTGACAACGACA
CACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAGCACCCTGGCGAAGACGAATGTATTTTGAAT
CGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACA
AGAAGGGTGTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGA
ACTCCACCTTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCA
CCTCCACAAATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCA
GAGAGTCATATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAA
GGTCAGACCAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGT
GGGAAGGGTGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACT
ATTGGGGATGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCG
GTGGTGGTTGTGACTGTTTGA
Gene >AgabiH97|063400
ATGATCGTCGGTCGCCCCGTTCCTCCCGCCTCCGCCACCTGGGCTTATCCTGACGACATTCCAGGCTCAAGATGC
GGTCCCGAAGATGGTCCCTGGCCGCGCCAGTATCGAGTTCTCTCCGAAAATGAGGTCTGGCGCGAGCTTAAGGAA
TTGGCAAAGCCTCATTCGGTCGTGTTCAACAACGACCGAGGGTTCCGTGCGGATTCTATCAACTTCCAGCCTTCG
CCGAAAACAAAGACTCAGGACAGACACGTCGTTACAGAAATCAATATCCGGGGTCAGAAGTGGAATCTGACGGGG
GTGTTTGACGGTATGGTTTGTCCATCCCTCTATCTCGTTGCGCTAACATGTTTTTCGAACCAGGTCATTTGGGCG
ATGTTACTGTGGAACATGTCTCTTATCATCTACCCATCATTGTGGAAGAGTTTCTTCAAGGAGCACTTGAGCAGA
ACCCGGAGCGCGAACTCACACCCGAGTACATCGGTGATCTCTTCTCACAATCGATACTCGCATTCGACGACGCAA
TTGCGCACGACGTCCTGGATCTCTTTGGTGGAAGCGTTGAAGAGCTGGAAAAGTATTCGGACTCTGAAATCAAGG
AGATAATCAATGACCAACATCTCGGAGGCGCCAACTGGAGAAAGGCGAGGCTGTGTATGTATGGTACAACAGCAC
TTGTTGCGCTTGTGGACCCAGAACATGTCAACCTCTGGGTCGCAAACCTAGGCGACTGCCAACCAGGTAATGTTG
GTCCGGCCGATGATGACGTATATTACTCATCCTCTCGGCTCAGTGTTGATTACCCCGGATGACGAAGGCATCAAA
GACTGGCAGATTGAAGTTCTGACAACGACACACAATGGGGATAACGACGACGAGCTTGACCGAATAAGGGCTGAG
CACCCTGGCGAAGACGAATGTATTTTGAATCGCAGGGTGCTTGGTGCTCTGGCGCCCACTCGCTGTGAGTACCCG
TCTGTTACATCATTCCATCAAACCCCGCATGCTTCTTTTAGCCTAAAATAAACTCATCCCGCCGCTTATTGAGTT
TTGGGCGAGCAATTGACTTGGGGTCGTTTCTACCTGTCCCTCGGGTCTAGCTGTTCCTGGCCTGTTCTCCCGAAT
TTGTCGGCTGACTTTACTCTAAACAGGCTTAGGCGATATTCCCTTCAAACAACCCCCGGCCTTCACAAGAAGGGT
GTTGTATAACCTGTTCCCTGGATTCCATAACACATCGCCTTGGGAAGAATTCTTGAACAGAAATCGAACTCCACC
TTATATCACTGCCAAGCCCGATGTAGTACACCGGAAACTACGACGAGCGTCGTCAGACTCACTTCCACCTCCACA
AATAACCTTTTCACCTCCATCGACCGACAGTCTAACTAAATTCTCCTACAAACCCGGAGATGAGCCAGAGAGTCA
TATCGTACATCGACCCACCTTCCTCGTCCTCACCTCTGACGGTTTTTCGGACTTGTGTTCAGGAGAAGGTCAGAC
CAGGGTTTTGGAATCTTGGGCTAGGGGTATGATGGAGCTTTGGTCGCTTGGTGAAGTCGGTGAAGGTGGGAAGGG
TGGGAGTGGACGGAAAGAGGATGTGAGAGGAAGTGGGAATATGGCGTTGAGGCTTTTGAGGAGGACTATTGGGGA
TGATAGGTTTGCTGTTAGCAAAGTGTTGACTTTGGATATGGATGAGGCGTGGATTGATGATACTGCGGTGGTGGT
TGTGACTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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